Lens_culinaris_v1_Contig327

Contig Overview


Name	Lens_culinaris_v1_Contig327
Unique Name	Lens_culinaris_v1_Contig327
Type	contig
Organism	Lens culinaris (lentil)
Sequence length	638

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	contig

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GT623369	GT623369	Lens culinaris	EST
GT626059	GT626059	Lens culinaris	EST
GT620301	GT620301	Lens culinaris	EST

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
KEGG analysis for Lens culinaris unigene v1	2011-01-05
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
GT623369	EST	GT623369:1..620 +
GT626059	EST	GT626059:117..639 +
GT620301	EST	GT620301:142..639 +

Homology

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BLAST of Lens_culinaris_v1_Contig327 vs. SwissProt
Match: RL172_ARATH (60S ribosomal protein L17-2 OS=Arabidopsis thaliana GN=RPL17B PE=2 SV=2)

HSP 1 Score: 274.248 bits (700), Expect = 3.856e-73
Identity = 130/151 (86.09%), Postives = 145/151 (96.03%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKRKA 455
            RVHFKNTRETA +IRK+PLIKAKRYLEDV+AHKQAIPF RFCRGVGRTAQAK+RHSNGQGRWPAKSA+F+LDLLKNAESNAEVKGLDVDAL++SHIQVNQA KQRRRTYRAHGRINPYMS+PCHIEL+LSEKEE V+KEP+TQLA+  +K+
Sbjct:   23 RVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLAAKSKKS 173

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. SwissProt
Match: RL171_ARATH (60S ribosomal protein L17-1 OS=Arabidopsis thaliana GN=RPL17A PE=1 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 3.265e-72
Identity = 129/150 (86.00%), Postives = 143/150 (95.33%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKRK 452
            RVHFKNTRETA +IRK+PL KAKRYLEDV+AHKQAIPF RFCRGVGRTAQAK+RHSNGQGRWPAKSA+F+LDLLKNAESNAEVKGLDVDAL++SHIQVNQA KQRRRTYRAHGRINPYMS+PCHIEL+LSEKEE V+KEP+TQLA+  +K
Sbjct:   23 RVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLAAKSKK 172

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BLAST of Lens_culinaris_v1_Contig327 vs. SwissProt
Match: RL17_MAIZE (60S ribosomal protein L17 OS=Zea mays GN=RPL17 PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.050e-70
Identity = 128/149 (85.91%), Postives = 140/149 (93.96%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKR 449
            RVHFKNTRETAF++RK+PL KAKRYLEDV+AHKQAIPFRR+C GVGRTAQAKSRHSNGQGRWP KSA+FILDLLKNAESNA+VKGLDVD LYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL+LSEKEE V+KE D  +A+ K+
Sbjct:   23 RVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPFRRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARKQ 171

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. SwissProt
Match: RL171_HORVU (60S ribosomal protein L17-1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 3.056e-70
Identity = 126/145 (86.90%), Postives = 138/145 (95.17%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLA 437
            RVHFKNTRETAF++RKMPL KAKRYLEDVLAHKQAIPFRR+CRGVGRTAQ K+R  NGQGRWPAKSAKF+LDLLKNAESNAEVKGLDVDALY+SHIQVNQAQKQRRRTYRAHGRINPYMS+PCHIEL+LSEKEE V+KE ++ +A
Sbjct:   23 RVHFKNTRETAFALRKMPLNKAKRYLEDVLAHKQAIPFRRYCRGVGRTAQVKNRQPNGQGRWPAKSAKFVLDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESHIA 167

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. SwissProt
Match: RL172_HORVU (60S ribosomal protein L17-2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 5.763e-69
Identity = 125/148 (84.46%), Postives = 137/148 (92.57%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSK 446
            RVHFKNTRETAF++R+MPL KAKRYLEDVLAHKQAIPFRR+CRGVGRTAQ K+R  NGQGRWPAKSA+F+LDLLKNAESNAEVKGLDVD LY+SHIQVNQAQKQRRRTYRAHGRINPYMS+PCHIEL+LSEKEE V+KE D  +A  K
Sbjct:   23 RVHFKNTRETAFALRRMPLGKAKRYLEDVLAHKQAIPFRRYCRGVGRTAQVKNRQPNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDNLYISHIQVNQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEADNVVAPRK 170

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. SwissProt
Match: RL17_PODCA (60S ribosomal protein L17 OS=Podocoryne carnea GN=RPL17 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 4.901e-52
Identity = 103/154 (66.88%), Postives = 125/154 (81.17%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAV---QKEPDTQLASSKRKA 455
            RVHFKNTRETA +I+KM + KA RYL+DV+A KQ IPFRRFC GVGR AQAK+   + QGRWP KSA+F+L LLKNAESNA+VKGLDVD+L + HIQVN+A   RRRTYRAHGRINPYMSSPCHIE+++SEKE+ V   ++E + +  S K+ A
Sbjct:   23 RVHFKNTRETAQAIKKMHIRKAYRYLKDVIAKKQIIPFRRFCGGVGRKAQAKA-FKHTQGRWPVKSAEFLLGLLKNAESNADVKGLDVDSLVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEMIVSEKEQVVPRAEEEVEVKKVSKKKLA 175

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. SwissProt
Match: RL17_HUMAN (60S ribosomal protein L17 OS=Homo sapiens GN=RPL17 PE=1 SV=3)

HSP 1 Score: 194.126 bits (492), Expect = 5.072e-49
Identity = 97/149 (65.10%), Postives = 120/149 (80.54%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKR 449
            RVHFKNTRETA +I+ M + KA +YL+DV   KQ +PFRR+  GVGR AQAK +    QGRWP KSA+F+L +LKNAESNAE+KGLDVD+L + HIQVN+A K RRRTYRAHGRINPYMSSPCHIE++L+EKE+ V K P+ ++A  K+
Sbjct:   23 RVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK-PEEEVAQKKK 169

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. SwissProt
Match: RL17_FELCA (60S ribosomal protein L17 OS=Felis catus GN=RPL17 PE=2 SV=3)

HSP 1 Score: 194.126 bits (492), Expect = 5.072e-49
Identity = 97/149 (65.10%), Postives = 120/149 (80.54%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKR 449
            RVHFKNTRETA +I+ M + KA +YL+DV   KQ +PFRR+  GVGR AQAK +    QGRWP KSA+F+L +LKNAESNAE+KGLDVD+L + HIQVN+A K RRRTYRAHGRINPYMSSPCHIE++L+EKE+ V K P+ ++A  K+
Sbjct:   23 RVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK-PEEEVAQKKK 169

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. SwissProt
Match: RL17_RAT (60S ribosomal protein L17 OS=Rattus norvegicus GN=Rpl17 PE=2 SV=3)

HSP 1 Score: 193.741 bits (491), Expect = 6.624e-49
Identity = 97/149 (65.10%), Postives = 120/149 (80.54%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKR 449
            RVHFKNTRETA +I+ M + KA +YL+DV   KQ +PFRR+  GVGR AQAK +    QGRWP KSA+F+L +LKNAESNAE+KGLDVD+L + HIQVN+A K RRRTYRAHGRINPYMSSPCHIE++L+EKE+ V K P+ ++A  K+
Sbjct:   23 RVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK-PEEEVAQKKK 169

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. SwissProt
Match: RL17_MOUSE (60S ribosomal protein L17 OS=Mus musculus GN=Rpl17 PE=2 SV=3)

HSP 1 Score: 193.741 bits (491), Expect = 6.624e-49
Identity = 97/149 (65.10%), Postives = 120/149 (80.54%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKR 449
            RVHFKNTRETA +I+ M + KA +YL+DV   KQ +PFRR+  GVGR AQAK +    QGRWP KSA+F+L +LKNAESNAE+KGLDVD+L + HIQVN+A K RRRTYRAHGRINPYMSSPCHIE++L+EKE+ V K P+ ++A  K+
Sbjct:   23 RVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK-PEEEVAQKKK 169

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. TrEMBL
Match: C6SWG9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 4.106e-75
Identity = 136/149 (91.28%), Postives = 147/149 (98.66%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKR 449
            RVHFKNTRETAF+IRK+PL+KAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAK+RHSNGQGRWP KSAKFILDLLKNAESNAEVKGLDVDALY+SHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL+LSEKEE V+KEP+T+LA+SK+
Sbjct:   23 RVHFKNTRETAFAIRKLPLVKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETKLATSKK 171

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. TrEMBL
Match: C6SWL4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.038e-74
Identity = 136/150 (90.67%), Postives = 146/150 (97.33%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKRK 452
            RVHFKNTRETAF+IRK+PL+KAKRYLEDVLAHKQAIPFRRFC GVGRTAQAK+RHSNGQGRWP KSAKFILDLLKNAESNAEVKGLDVDALY+SHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL+LSEKEE V+KE +TQLA+SK+K
Sbjct:   23 RVHFKNTRETAFAIRKLPLVKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEAETQLATSKKK 172

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. TrEMBL
Match: C6SXK1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.661e-74
Identity = 134/149 (89.93%), Postives = 146/149 (97.99%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKR 449
            RVHFKNTRETAF+IRK+PL+KAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAK+RHSNGQGRWP KSAKFILDLLKNAESNAEVKGLDVDALY++HIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL+LSEKEE V+KEP+T+L +SK+
Sbjct:   23 RVHFKNTRETAFAIRKLPLVKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYITHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETKLTTSKK 171

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. TrEMBL
Match: B9HSZ2_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_230092 PE=3 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.661e-74
Identity = 135/150 (90.00%), Postives = 146/150 (97.33%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKRK 452
            RVHFKNTRETAF++RK+PL+KAKRYLEDV+AHKQAIPFRRFC GVGRTAQAK+RHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALY++HIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL LSEKEE V+KEP+TQLA+SK K
Sbjct:   23 RVHFKNTRETAFALRKLPLVKAKRYLEDVMAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYITHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLSEKEEPVKKEPETQLATSKSK 172

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. TrEMBL
Match: A9PJV5_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.661e-74
Identity = 135/150 (90.00%), Postives = 146/150 (97.33%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKRK 452
            RVHFKNTRETAF++RK+PL+KAKRYLEDV+AHKQAIPFRRFC GVGRTAQAK+RHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALY++HIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL LSEKEE V+KEP+TQLA+SK K
Sbjct:   23 RVHFKNTRETAFALRKLPLVKAKRYLEDVMAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYITHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLSEKEEPVKKEPETQLATSKSK 172

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. TrEMBL
Match: A9PA96_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.661e-74
Identity = 135/150 (90.00%), Postives = 146/150 (97.33%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKRK 452
            RVHFKNTRETAF++RK+PL+KAKRYLEDV+AHKQAIPFRRFC GVGRTAQAK+RHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALY++HIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL LSEKEE V+KEP+TQLA+SK K
Sbjct:   23 RVHFKNTRETAFALRKLPLVKAKRYLEDVMAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYITHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLSEKEEPVKKEPETQLATSKSK 172

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. TrEMBL
Match: B9HKY7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_420429 PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 5.929e-74
Identity = 135/150 (90.00%), Postives = 146/150 (97.33%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKRK 452
            RVHFKNTRETAF++RK+PL KAKRYLEDVLAHKQAIPFRRFC GVGRTAQAK+RHSNGQGRWPAKSA+FILDLLKNAESNAE+KGLDVDALY+SHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEE V+KEP+TQ+A+SK K
Sbjct:   22 RVHFKNTRETAFALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPAKSARFILDLLKNAESNAELKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEPVKKEPETQIATSKSK 171

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BLAST of Lens_culinaris_v1_Contig327 vs. TrEMBL
Match: B9IF99_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_733603 PE=3 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 7.743e-74
Identity = 138/150 (92.00%), Postives = 143/150 (95.33%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKRK 452
            RVHFKNTRETAFSIRKMPL KAKRYLEDVLAHKQAIPFRRFC GVGRTAQAK+RHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALY+SHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL+LSEKEE V+KE DTQ+A  K K
Sbjct:   23 RVHFKNTRETAFSIRKMPLDKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADTQIAPRKPK 172

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. TrEMBL
Match: A9PBU5_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.011e-73
Identity = 134/150 (89.33%), Postives = 146/150 (97.33%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKRK 452
            RVHFKNTRETAF++RK+PL+KAKRYLEDV+AHKQAIPFRRFC GVGRTAQAK+RHSNGQGRWPAKSAKFILDLLKNAES+AEVKGLDVDALY++HIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL LSEKEE V+KEP+TQLA+SK K
Sbjct:   23 RVHFKNTRETAFALRKLPLVKAKRYLEDVMAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPAKSAKFILDLLKNAESDAEVKGLDVDALYITHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLSEKEEPVKKEPETQLATSKSK 172

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. TrEMBL
Match: B9RMF8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1080700 PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.725e-73
Identity = 133/149 (89.26%), Postives = 145/149 (97.32%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKR 449
            RVHFKNTRETAF++RK+PL KAKRYLEDV+AHKQAIPFRRFC GVGRTAQAK+RHSNGQGRWP KSAKFILDLLKNAESNAEVKGLDVDALY+SHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL+L+EKEEAV+KEP+TQLA+S +
Sbjct:  925 RVHFKNTRETAFALRKLPLTKAKRYLEDVMAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILAEKEEAVRKEPETQLATSNK 1073

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. TAIR peptide
Match: AT1G67430.1 (| Symbols: | Ribosomal protein L22p/L17e family protein | chr1:25262209-25263627 FORWARD LENGTH=175)

HSP 1 Score: 274.248 bits (700), Expect = 3.964e-74
Identity = 130/151 (86.09%), Postives = 145/151 (96.03%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKRKA 455
            RVHFKNTRETA +IRK+PLIKAKRYLEDV+AHKQAIPF RFCRGVGRTAQAK+RHSNGQGRWPAKSA+F+LDLLKNAESNAEVKGLDVDAL++SHIQVNQA KQRRRTYRAHGRINPYMS+PCHIEL+LSEKEE V+KEP+TQLA+  +K+
Sbjct:   23 RVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLAAKSKKS 173

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BLAST of Lens_culinaris_v1_Contig327 vs. TAIR peptide
Match: AT1G27400.1 (| Symbols: | Ribosomal protein L22p/L17e family protein | chr1:9515230-9516725 FORWARD LENGTH=176)

HSP 1 Score: 271.166 bits (692), Expect = 3.356e-73
Identity = 129/150 (86.00%), Postives = 143/150 (95.33%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKRK 452
            RVHFKNTRETA +IRK+PL KAKRYLEDV+AHKQAIPF RFCRGVGRTAQAK+RHSNGQGRWPAKSA+F+LDLLKNAESNAEVKGLDVDAL++SHIQVNQA KQRRRTYRAHGRINPYMS+PCHIEL+LSEKEE V+KEP+TQLA+  +K
Sbjct:   23 RVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLAAKSKK 172

[Close]

BLAST of Lens_culinaris_v1_Contig327 vs. TAIR peptide
Match: AT1G67430.2 (| Symbols: | Ribosomal protein L22p/L17e family protein | chr1:25262209-25263627 FORWARD LENGTH=131)

HSP 1 Score: 168.318 bits (425), Expect = 3.063e-42
Identity = 90/151 (59.60%), Postives = 102/151 (67.55%), Query Frame = 3

Query:    3 RVHFKNTRETAFSIRKMPLIKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELVLSEKEEAVQKEPDTQLASSKRKA 455
            RVHFKNTRETA +IRK+PLIKAKRYLEDV+AHKQAIPF RFCRGVGRTAQAK+RHSNGQGRWPAKSA+F+LDLLKNAESNA                                            EL+LSEKEE V+KEP+TQLA+  +K+
Sbjct:   23 RVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNA--------------------------------------------ELILSEKEEPVKKEPETQLAAKSKKS 129

The following BLAST results are available for this feature:

BLAST of Lens_culinaris_v1_Contig327 vs. SwissProt
BLAST of Lens_culinaris_v1_Contig327 vs. TrEMBL
BLAST of Lens_culinaris_v1_Contig327 vs. TAIR peptide

BLAST of Lens_culinaris_v1_Contig327 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL172_ARATH	3.856e-73	86.09	60S ribosomal protein L17-2 OS=Arabidopsis thalian...	[more]
RL171_ARATH	3.265e-72	86.00	60S ribosomal protein L17-1 OS=Arabidopsis thalian...	[more]
RL17_MAIZE	1.050e-70	85.91	60S ribosomal protein L17 OS=Zea mays GN=RPL17 PE=...	[more]
RL171_HORVU	3.056e-70	86.90	60S ribosomal protein L17-1 OS=Hordeum vulgare PE=...	[more]
RL172_HORVU	5.763e-69	84.46	60S ribosomal protein L17-2 OS=Hordeum vulgare PE=...	[more]
RL17_PODCA	4.901e-52	66.88	60S ribosomal protein L17 OS=Podocoryne carnea GN=...	[more]
RL17_HUMAN	5.072e-49	65.10	60S ribosomal protein L17 OS=Homo sapiens GN=RPL17...	[more]
RL17_FELCA	5.072e-49	65.10	60S ribosomal protein L17 OS=Felis catus GN=RPL17 ...	[more]
RL17_RAT	6.624e-49	65.10	60S ribosomal protein L17 OS=Rattus norvegicus GN=...	[more]
RL17_MOUSE	6.624e-49	65.10	60S ribosomal protein L17 OS=Mus musculus GN=Rpl17...	[more]

BLAST of Lens_culinaris_v1_Contig327 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6SWG9_SOYBN	4.106e-75	91.28	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SWL4_SOYBN	2.038e-74	90.67	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SXK1_SOYBN	2.661e-74	89.93	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9HSZ2_POPTR	2.661e-74	90.00	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
A9PJV5_9ROSI	2.661e-74	90.00	Putative uncharacterized protein OS=Populus tricho...	[more]
A9PA96_POPTR	2.661e-74	90.00	Putative uncharacterized protein OS=Populus tricho...	[more]
B9HKY7_POPTR	5.929e-74	90.00	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9IF99_POPTR	7.743e-74	92.00	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PBU5_POPTR	1.011e-73	89.33	Putative uncharacterized protein OS=Populus tricho...	[more]
B9RMF8_RICCO	1.725e-73	89.26	Putative uncharacterized protein OS=Ricinus commun...	[more]

BLAST of Lens_culinaris_v1_Contig327 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G67430.1	3.964e-74	86.09	\| Symbols: \| Ribosomal protein L22p/L17e family p...	[more]
AT1G27400.1	3.356e-73	86.00	\| Symbols: \| Ribosomal protein L22p/L17e family p...	[more]
AT1G67430.2	3.063e-42	59.60	\| Symbols: \| Ribosomal protein L22p/L17e family p...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001063	Ribosomal protein L22/L17	GENE3D	3.90.470.10	no description	coord: 1..135 score: 2.4
IPR001063	Ribosomal protein L22/L17	PFAM	PF00237	Ribosomal_L22	coord: 1..131 score: 2.3
IPR001063	Ribosomal protein L22/L17	SUPERFAMILY	54843	Ribosomal protein L22	coord: 1..132 score: 1.1
IPR005721	Ribosomal protein L22/L17, eukaryotic/archaeal	PANTHER	PTHR11593	60S RIBOSOMAL PROTEIN L17	coord: 1..151 score: 8.6
IPR005721	Ribosomal protein L22/L17, eukaryotic/archaeal	TIGRFAMs	TIGR01038	L22_arch: ribosomal protein L22	coord: 1..132 score: 1.6
IPR018260	Ribosomal protein L22/L17, conserved site	PROSITE	PS00464	RIBOSOMAL_L22	coord: 105..129 score
None	No IPR available	PANTHER	PTHR10010	SODIUM-DEPENDENT PHOSPHATE TRANSPORTER-RELATED	coord: 1..84 score: 9.2
None	No IPR available	PANTHER	PTHR10010:SF4	SODIUM-DEPENDENT PHOSPHATE TRANSPORTER SLC34A1-RELATED	coord: 1..84 score: 9.2

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Lens_culinaris_v1_Contig327 ID=Lens_culinaris_v1_Contig327; Name=Lens_culinaris_v1_Contig327; organism=Lens culinaris; type=contig; length=638bp
TTAGAGTTCATTTCAAGAACACTAGGGAAACAGCGTTTTCCATCAGGAAG
ATGCCCTTGATCAAGGCTAAAAGGTACTTGGAAGATGTGCTTGCTCACAA
ACAGGCCATTCCATTCAGACGTTTTTGCCGTGGTGTTGGGAGGACAGCCC
AGGCCAAGAGCAGACACTCCAATGGGCAAGGAAGGTGGCCTGCCAAATCT
GCCAAGTTCATCCTTGATTTGCTGAAGAATGCAGAGAGCAATGCTGAAGT
CAAAGGTTTGGATGTTGATGCTCTCTATGTTTCTCATATCCAAGTCAATC
AAGCACAGAAACAAAGACGTCGGACATACAGAGCCCATGGAAGAATCAAC
CCTTACATGTCATCCCCATGCCACATAGAGTTGGTTTTATCTGAAAAGGA
AGAAGCTGTTCAGAAAGAGCCTGATACACAATTGGCTTCTAGCAAGAGGA
AGGCTTAAACTCTACCAAAGTGGCACTTTGTCTTGAACTCTTTGTTAATG
TTAAGAGAACAATTTTGTTGCCATATTTATTTCTCTTCAATTATTTGTAA
GACATTTGTAGGATAAGGCTTTCAATCACTGTTAAGGTTTATACTGTTTT
GAATTATTGAGTCAATTTGGAAACTTTGGTGTTTATCT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome
GO:0015934	large ribosomal subunit

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR001063	Ribosomal_L22
IPR005721	Ribosomal_L22/L17_euk/arc
IPR018260	Ribosomal_L22/L17_CS

Search form

Lens_culinaris_v1_Contig327