Lens_culinaris_v1_Contig371

Contig Overview
NameLens_culinaris_v1_Contig371
Unique NameLens_culinaris_v1_Contig371
Typecontig
OrganismLens culinaris (lentil)
Sequence length471
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GT624468GT624468Lens culinarisEST
GT619017GT619017Lens culinarisEST


Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GT624468ESTGT624468:1..471 +
GT619017ESTGT619017:13..455 +
Homology
[Close]
BLAST of Lens_culinaris_v1_Contig371 vs. TrEMBL
Match: C6TF76_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 9.613e-44
Identity = 81/91 (89.01%), Postives = 85/91 (93.41%), Query Frame = 3 
Query:   24 MGFIMEFAENLVLKLMEDPHERDRRFREHVYKVKDRCAKTKEMWSYPMRPYGFWTFERHNSQLAWDAQISQVAGRRDPYDDILRHYPASSK 296
            MGFIMEFAENLVLKLMEDP ERDRRFREHVY+VKDRC KTKEMWSYPMRPYGFWTFERHNSQLAWDAQISQVAGRRDPYDD+L+H+    K
Sbjct:    1 MGFIMEFAENLVLKLMEDPKERDRRFREHVYRVKDRCEKTKEMWSYPMRPYGFWTFERHNSQLAWDAQISQVAGRRDPYDDLLQHFSTPPK 91
[Close]
BLAST of Lens_culinaris_v1_Contig371 vs. TrEMBL
Match: A9P8A9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_640023 PE=4 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.200e-39
Identity = 75/91 (82.42%), Postives = 81/91 (89.01%), Query Frame = 3 
Query:   24 MGFIMEFAENLVLKLMEDPHERDRRFREHVYKVKDRCAKTKEMWSYPMRPYGFWTFERHNSQLAWDAQISQVAGRRDPYDDILRHYPASSK 296
            MGFIMEFAENLVL+LMEDP ERDR+FRE VY VKDRC KTKEMWSYP+RPYGFWTFERHN+QLAWDAQISQV GRRDPYDD+L+    S K
Sbjct:    1 MGFIMEFAENLVLRLMEDPKERDRKFRERVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNAQLAWDAQISQVPGRRDPYDDLLQDSYGSPK 91
[Close]
BLAST of Lens_culinaris_v1_Contig371 vs. TrEMBL
Match: B9GZY8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_817547 PE=4 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.074e-38
Identity = 71/84 (84.52%), Postives = 79/84 (94.05%), Query Frame = 3 
Query:   24 MGFIMEFAENLVLKLMEDPHERDRRFREHVYKVKDRCAKTKEMWSYPMRPYGFWTFERHNSQLAWDAQISQVAGRRDPYDDILR 275
            MGFIMEFAENL+L+LMEDP ERDR+FRE VY VKDRC KTKEMWSYP+RPYGFWTFERHN+QLAWDA+ISQV GRRDPYDD+L+
Sbjct:    1 MGFIMEFAENLILRLMEDPKERDRKFRERVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNAQLAWDAKISQVPGRRDPYDDLLQ 84
[Close]
BLAST of Lens_culinaris_v1_Contig371 vs. TrEMBL
Match: B9RME7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1080390 PE=4 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.035e-38
Identity = 70/84 (83.33%), Postives = 80/84 (95.24%), Query Frame = 3 
Query:   24 MGFIMEFAENLVLKLMEDPHERDRRFREHVYKVKDRCAKTKEMWSYPMRPYGFWTFERHNSQLAWDAQISQVAGRRDPYDDILR 275
            MGFIMEFA++LVL+LMEDP ERDR+FREH+Y++KDRC KTKEMWS P+RPYGFWTFERHNSQLAWDAQISQV GRRDPYDD+L+
Sbjct:    1 MGFIMEFAKDLVLRLMEDPRERDRKFREHLYEMKDRCKKTKEMWSLPLRPYGFWTFERHNSQLAWDAQISQVPGRRDPYDDLLQ 84
[Close]
BLAST of Lens_culinaris_v1_Contig371 vs. TrEMBL
Match: D7TAY2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_10.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010482001 PE=4 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.995e-37
Identity = 72/92 (78.26%), Postives = 80/92 (86.96%), Query Frame = 3 
Query:   21 KMGFIMEFAENLVLKLMEDPHERDRRFREHVYKVKDRCAKTKEMWSYPMRPYGFWTFERHNSQLAWDAQISQVAGRRDPYDDILRHYPASSK 296
            KMGFIMEFAENL+LKLMEDP ERDRR RE +Y VKDRC +TKE+WS+P+RPYGFWTFERHNSQLAWD QISQV GRRDPYDD+L+     SK
Sbjct:   32 KMGFIMEFAENLILKLMEDPKERDRRARERLYAVKDRCDRTKEIWSFPIRPYGFWTFERHNSQLAWDPQISQVPGRRDPYDDLLQQNFYKSK 123
[Close]
BLAST of Lens_culinaris_v1_Contig371 vs. TrEMBL
Match: A5BVR1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018734 PE=4 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.995e-37
Identity = 72/92 (78.26%), Postives = 80/92 (86.96%), Query Frame = 3 
Query:   21 KMGFIMEFAENLVLKLMEDPHERDRRFREHVYKVKDRCAKTKEMWSYPMRPYGFWTFERHNSQLAWDAQISQVAGRRDPYDDILRHYPASSK 296
            KMGFIMEFAENL+LKLMEDP ERDRR RE +Y VKDRC +TKE+WS+P+RPYGFWTFERHNSQLAWD QISQV GRRDPYDD+L+     SK
Sbjct:  167 KMGFIMEFAENLILKLMEDPKERDRRARERLYAVKDRCDRTKEIWSFPIRPYGFWTFERHNSQLAWDPQISQVPGRRDPYDDLLQQNFYKSK 258
[Close]
BLAST of Lens_culinaris_v1_Contig371 vs. TrEMBL
Match: Q5YJP9_HYAOR (At1g67350-like protein OS=Hyacinthus orientalis PE=4 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.157e-35
Identity = 65/87 (74.71%), Postives = 76/87 (87.36%), Query Frame = 3 
Query:   24 MGFIMEFAENLVLKLMEDPHERDRRFREHVYKVKDRCAKTKEMWSYPMRPYGFWTFERHNSQLAWDAQISQVAGRRDPYDDILRHYP 284
            M F+MEFAENL+L++MEDP ERD+R REHVY +KD+C KTKEMWS P+RPYGFWTF+R N+QLAWDAQISQV GRRDPYDD+L   P
Sbjct:    1 MKFVMEFAENLILRMMEDPKERDKRAREHVYAIKDQCKKTKEMWSLPIRPYGFWTFDRFNAQLAWDAQISQVPGRRDPYDDLLADEP 87
[Close]
BLAST of Lens_culinaris_v1_Contig371 vs. TrEMBL
Match: Q9FYF8_ARATH (At1g67350 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.817e-34
Identity = 67/92 (72.83%), Postives = 79/92 (85.87%), Query Frame = 3 
Query:   24 MGFIMEFAENLVLKLMEDPHERDRRFREHVYKVKDRCAKTKEMWSYPMRPYGFWTFERHNSQLAWDAQISQVAGRRDPYDDIL--RHYPASS 293
            MGFIMEFAENLVL+LME+P ERDR+ REH+Y++ +RC K KEMW+ P+RPYGFWTFERHN+QL WD QISQVAGRRDPYDD+L   + P SS
Sbjct:    1 MGFIMEFAENLVLRLMENPEERDRKAREHIYEMHERCKKIKEMWALPIRPYGFWTFERHNAQLRWDPQISQVAGRRDPYDDLLEDNYTPPSS 92
[Close]
BLAST of Lens_culinaris_v1_Contig371 vs. TrEMBL
Match: Q5YJQ2_HYAOR (Putative uncharacterized protein OS=Hyacinthus orientalis PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.817e-34
Identity = 64/87 (73.56%), Postives = 76/87 (87.36%), Query Frame = 3 
Query:   24 MGFIMEFAENLVLKLMEDPHERDRRFREHVYKVKDRCAKTKEMWSYPMRPYGFWTFERHNSQLAWDAQISQVAGRRDPYDDILRHYP 284
            M F+MEFAENL+L++MEDP ERD+R REHVY +KD+C KTKEMWS P+RPYGFWTF+R N+QLAWD+QISQV GRRDPYDD+L   P
Sbjct:    1 MKFVMEFAENLILRMMEDPKERDKRAREHVYAIKDQCKKTKEMWSLPIRPYGFWTFDRFNAQLAWDSQISQVPGRRDPYDDLLADEP 87
[Close]
BLAST of Lens_culinaris_v1_Contig371 vs. TrEMBL
Match: D7KV23_ARALY (F1N21.17 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475833 PE=4 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.373e-34
Identity = 64/83 (77.11%), Postives = 75/83 (90.36%), Query Frame = 3 
Query:   24 MGFIMEFAENLVLKLMEDPHERDRRFREHVYKVKDRCAKTKEMWSYPMRPYGFWTFERHNSQLAWDAQISQVAGRRDPYDDIL 272
            MGFIMEFAENLVL+LME+P ERDR+ REH+Y++ +RC K KEMW+ P+RPYGFWTFERHN+QL WD QISQVAGRRDPYDD+L
Sbjct:    1 MGFIMEFAENLVLRLMENPEERDRKAREHIYEMHERCKKIKEMWALPIRPYGFWTFERHNAQLRWDPQISQVAGRRDPYDDLL 83
[Close]
BLAST of Lens_culinaris_v1_Contig371 vs. TAIR peptide
Match: AT1G67350.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:25235826-25236122 FORWARD LENGTH=98)

HSP 1 Score: 148.673 bits (374), Expect = 1.404e-36
Identity = 67/92 (72.83%), Postives = 79/92 (85.87%), Query Frame = 3 
Query:   24 MGFIMEFAENLVLKLMEDPHERDRRFREHVYKVKDRCAKTKEMWSYPMRPYGFWTFERHNSQLAWDAQISQVAGRRDPYDDIL--RHYPASS 293
            MGFIMEFAENLVL+LME+P ERDR+ REH+Y++ +RC K KEMW+ P+RPYGFWTFERHN+QL WD QISQVAGRRDPYDD+L   + P SS
Sbjct:    1 MGFIMEFAENLVLRLMENPEERDRKAREHIYEMHERCKKIKEMWALPIRPYGFWTFERHNAQLRWDPQISQVAGRRDPYDDLLEDNYTPPSS 92
[Close]
BLAST of Lens_culinaris_v1_Contig371 vs. TAIR peptide
Match: AT1G67350.1 (| Symbols: | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:25235826-25236122 FORWARD LENGTH=98)

HSP 1 Score: 148.673 bits (374), Expect = 1.404e-36
Identity = 67/92 (72.83%), Postives = 79/92 (85.87%), Query Frame = 3 
Query:   24 MGFIMEFAENLVLKLMEDPHERDRRFREHVYKVKDRCAKTKEMWSYPMRPYGFWTFERHNSQLAWDAQISQVAGRRDPYDDIL--RHYPASS 293
            MGFIMEFAENLVL+LME+P ERDR+ REH+Y++ +RC K KEMW+ P+RPYGFWTFERHN+QL WD QISQVAGRRDPYDD+L   + P SS
Sbjct:    1 MGFIMEFAENLVLRLMENPEERDRKAREHIYEMHERCKKIKEMWALPIRPYGFWTFERHNAQLRWDPQISQVAGRRDPYDDLLEDNYTPPSS 92
The following BLAST results are available for this feature:
BLAST of Lens_culinaris_v1_Contig371 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TF76_SOYBN9.613e-4489.01Putative uncharacterized protein OS=Glycine max PE... [more]
A9P8A9_POPTR3.200e-3982.42Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GZY8_POPTR2.074e-3884.52Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RME7_RICCO6.035e-3883.33Putative uncharacterized protein OS=Ricinus commun... [more]
D7TAY2_VITVI2.995e-3778.26Whole genome shotgun sequence of line PN40024, sca... [more]
A5BVR1_VITVI2.995e-3778.26Putative uncharacterized protein OS=Vitis vinifera... [more]
Q5YJP9_HYAOR8.157e-3574.71At1g67350-like protein OS=Hyacinthus orientalis PE... [more]
Q9FYF8_ARATH1.817e-3472.83At1g67350 OS=Arabidopsis thaliana PE=4 SV=1[more]
Q5YJQ2_HYAOR1.817e-3473.56Putative uncharacterized protein OS=Hyacinthus ori... [more]
D7KV23_ARALY2.373e-3477.11F1N21.17 OS=Arabidopsis lyrata subsp. lyrata GN=AR... [more]
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BLAST of Lens_culinaris_v1_Contig371 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G67350.21.404e-3672.83| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT1G67350.11.404e-3672.83| Symbols: | unknown protein; Has 2 Blast hits to... [more]
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Sequences
The following sequences are available for this feature:

contig sequence

>Lens_culinaris_v1_Contig371 ID=Lens_culinaris_v1_Contig371; Name=Lens_culinaris_v1_Contig371; organism=Lens culinaris; type=contig; length=471bp
AGAAGGCGAAGAAAGAACAAAAAATGGGATTCATAATGGAATTCGCTGAG
AATTTGGTTTTGAAATTGATGGAAGATCCACACGAAAGGGACCGTAGATT
CAGGGAACACGTCTATAAGGTGAAAGATCGATGCGCCAAGACGAAGGAGA
TGTGGAGTTACCCTATGCGGCCATATGGGTTCTGGACATTCGAACGCCAC
AATTCTCAGCTTGCTTGGGATGCGCAGATTAGTCAAGTTGCTGGTCGAAG
GGATCCATATGATGATATCCTTCGTCACTACCCTGCATCATCTAAATGAG
TGGTGCTGAACTTTTTCTCAACTCACAAGCTTTCTTGGTGAAAAAGTGGG
AATTTGTCATATTTTCTTTTTGAATATTCTGTCCTGTTGCATGTTGTATT
GACTACACCGGGTTTGTAATGTACTAAATTGGTGTTTCAAATAAAGTTTC
AATAGAACTATCGTGTTATAT
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