Lens_culinaris_v1_Contig374

Contig Overview


Name	Lens_culinaris_v1_Contig374
Unique Name	Lens_culinaris_v1_Contig374
Type	contig
Organism	Lens culinaris (lentil)
Sequence length	500

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	contig

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GT624453	GT624453	Lens culinaris	EST
GT619680	GT619680	Lens culinaris	EST

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
GT624453	EST	GT624453:1..500 +
GT619680	EST	GT619680:1..500 +

Homology

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BLAST of Lens_culinaris_v1_Contig374 vs. SwissProt
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.498e-20
Identity = 39/92 (42.39%), Postives = 63/92 (68.48%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            A  CG+  SS+ PC S+++G +  PS+SCC GVR +   A++  +RR AC C+K +A++F N+    AAS+P +CGV++ +PI  ++DC+ I
Sbjct:   29 AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. SwissProt
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.498e-20
Identity = 39/92 (42.39%), Postives = 63/92 (68.48%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            A  CG+  SS+ PC S+++G +  PS+SCC GVR +   A++  +RR AC C+K +A++F N+    AAS+P +CGV++ +PI  ++DC+ I
Sbjct:   29 AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. SwissProt
Match: NLTPA_RICCO (Non-specific lipid-transfer protein A OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.469e-19
Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 1

Query:   88 DCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            DCG+  SS+  C  FL GG   PS SCC GV+ +K+ A T  +RR ACEC+K  A  FP I+ D A+SLP++CGV++  PI +  +C  I
Sbjct:    2 DCGQVNSSLASCIPFLTGGVASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTNCQAI 91

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. SwissProt
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.355e-17
Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            A DCG   S V PC S++ GG   PS  CCDGV+ + + A +  +R+ AC C+K +A    N+ +D A S+P +CGVNL Y I  N+DC+ +
Sbjct:   23 AIDCGHVDSLVRPCLSYVQGGPG-PSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. SwissProt
Match: NLTPB_RICCO (Non-specific lipid-transfer protein B OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.770e-17
Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 1

Query:   88 DCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            +CG+   ++  C  FL G D  PS +CC GV  +K  A T +++R ACEC+K  A  +PNIR+D A+SLP +CGV +  PI +  +C+ I
Sbjct:    2 NCGQVNKALSSCVPFLTGFDTTPSLTCCAGVMELKRLAPTVKDKRIACECVKTAAARYPNIREDAASSLPYKCGVVINVPISKTTNCHEI 91

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. SwissProt
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.018e-17
Identity = 39/92 (42.39%), Postives = 59/92 (64.13%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            A  CG+  S+V PC S+  GG   PS +CC GVR + S+ATT  +RR AC C+K +A +   +    AAS+P +CGV++ Y I  ++DC+++
Sbjct:   26 AISCGQVNSAVSPCLSYARGGSG-PSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. SwissProt
Match: NLTP2_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 8.782e-17
Identity = 38/92 (41.30%), Postives = 59/92 (64.13%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            A  CG+  S+V PC S+  GG   PS +CC GVR + S+A+T  +RR AC C+K +A +   +    AAS+P +CGV++ Y I  ++DC+++
Sbjct:   27 AISCGQVNSAVSPCLSYARGGSG-PSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. SwissProt
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 8.782e-17
Identity = 38/92 (41.30%), Postives = 59/92 (64.13%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            A  CG+  S+V PC S+  GG   PS +CC GVR + S+A+T  +RR AC C+K +A +   +    AAS+P +CGV++ Y I  ++DC+++
Sbjct:   27 AISCGQVNSAVSPCLSYARGGSG-PSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. SwissProt
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.268e-15
Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            A  CG+  S+V PC ++  GG   PS +CC GVR +K++A+T  +RR AC C+K  A     +    AAS+P +CGV++ Y I  ++DC+ +
Sbjct:   25 AITCGQVNSAVGPCLTYARGGAG-PSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. SwissProt
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.268e-15
Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            A  CG+  S+V PC ++  GG   PS +CC GVR +K++A+T  +RR AC C+K  A     +    AAS+P +CGV++ Y I  ++DC+ +
Sbjct:   25 AITCGQVNSAVGPCLTYARGGAG-PSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TrEMBL
Match: B7E4W9_ORYSJ (Non-specific lipid-transfer protein OS=Oryza sativa subsp. japonica PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.279e-19
Identity = 39/92 (42.39%), Postives = 63/92 (68.48%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            A  CG+  SS+ PC S+++G +  PS+SCC GVR +   A++  +RR AC C+K +A++F N+    AAS+P +CGV++ +PI  ++DC+ I
Sbjct:   29 AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TrEMBL
Match: B9RD05_RICCO (Non-specific lipid-transfer protein OS=Ricinus communis GN=RCOM_1608560 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.409e-18
Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDC 348
            A DCG+  SS+  C  FL GG   PS SCC GV+ +K+ A T  +RR ACEC+K  A  FP I+ D A+SLP++CGV++  PI +  +C
Sbjct:   23 AVDCGQVNSSLASCIPFLTGGVASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTNC 111

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TrEMBL
Match: A5C154_VITVI (Non-specific lipid-transfer protein OS=Vitis vinifera GN=VITISV_020613 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.409e-18
Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 1

Query:   70 EQVNAFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCN 351
            E   A  C +   ++ PC S+L GG   P+++CCDGVR +KS + T  +R+ AC+C K+ A+  PNIR+D AA+LP +CGV    PI R+ DC+
Sbjct:   20 EPARAITCSDVNKALAPCVSYLTGGG-APTSACCDGVRTLKSLSPTTSDRQTACQCAKDAASRNPNIREDAAAALPNKCGVQTDIPISRSTDCS 112

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TrEMBL
Match: B9RD07_RICCO (Non-specific lipid-transfer protein OS=Ricinus communis GN=RCOM_1608580 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.146e-18
Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            A DCG+  SS+  C  FL GG   PS SCC GV+ +K+ A T  +RR AC+C+K  A  FP I+ D A+SLP++CGV++  PI +  +C  I
Sbjct:   23 AVDCGQVNSSLASCIPFLTGGVASPSASCCAGVQNLKTLAPTTADRRAACDCIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTNCQAI 114

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TrEMBL
Match: Q2PCB9_WHEAT (Non-specific lipid-transfer protein OS=Triticum aestivum GN=ltp9.3d PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.478e-17
Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            A  CG+  S++ PC S+  G    PS  CC GVR +   A+T  +R+ AC C+K LA +F  I    AA++P +CGV++ +PI  N++CNNI
Sbjct:   25 AVTCGDVTSAIAPCMSYATGKASAPSAGCCSGVRTLNGKASTSADRQAACRCLKNLAGSFKGISMGNAATIPGKCGVSVSFPINTNVNCNNI 116

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TrEMBL
Match: Q2PCD9_WHEAT (Non-specific lipid-transfer protein OS=Triticum aestivum GN=ltp9.3c PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.933e-17
Identity = 38/92 (41.30%), Postives = 57/92 (61.96%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            A  CG+  S++ PC S+  G    PS  CC GVR +   A+T  +R+ AC C+K LA +F  I    AA++P +CGV++ +PI  N++CNN+
Sbjct:   25 AVTCGDVMSAIPPCMSYATGQASSPSAGCCSGVRTLNGKASTSADRQAACRCLKNLAGSFNGISMGNAANIPGKCGVSVSFPINNNVNCNNL 116

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TrEMBL
Match: C6SZR9_SOYBN (Non-specific lipid-transfer protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.933e-17
Identity = 37/91 (40.66%), Postives = 61/91 (67.03%), Query Frame = 1

Query:   85 FDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            +DC +A+ S+  C  +L G  D PS +CC+GV+ +K+SA T +E+   C+C++E     PN + D A +LP+ CGV++G+PI +N  C++I
Sbjct:   29 YDCEKAKRSLKSCMEYLTGNVDSPSAACCNGVKELKASAPTKDEKIAECQCIEEALTPIPNFKQDRAIALPKECGVDVGFPIPKNFTCSSI 119

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TrEMBL
Match: C6T0U1_SOYBN (Non-specific lipid-transfer protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.749e-17
Identity = 39/91 (42.86%), Postives = 65/91 (71.43%), Query Frame = 1

Query:   85 FDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            ++C +A+SSV PC  +L    D PS  CC+GV+ +KSSA T +E+  AC+C+KE+  + PN+++D A +LP++CGV+ G+ I +  +C++I
Sbjct:   29 YNCEKAKSSVTPCIKYLTSKVDTPSAVCCNGVKEVKSSAPTKDEKIAACQCLKEVTTHIPNLKEDRATALPKQCGVDAGFLITKK-NCSSI 118

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TrEMBL
Match: Q8GZB0_WHEAT (Non-specific lipid-transfer protein OS=Triticum aestivum GN=LTP1500 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.726e-16
Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            A DCG   S V PC S++ GG   PS  CCDGV+ + + A +  +R+ AC C+K +A    N+ +D A S+P +CGVNL Y I  N+DC+ +
Sbjct:   26 AIDCGHVDSLVRPCLSYVQGGPG-PSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 116

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TrEMBL
Match: B9SMA5_RICCO (Non-specific lipid-transfer protein OS=Ricinus communis GN=RCOM_0297810 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.726e-16
Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = 1

Query:   73 QVNAFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCN 351
            Q  A +CG+   ++  C  FL G D  PS +CC GV  +K  A T +++R ACEC+K  A  +PNIR+D A+SLP +CGV +  PI +  +C+
Sbjct:   22 QGEAVNCGQVNKALSSCVPFLTGFDTTPSLTCCAGVMELKRLAPTVKDKRIACECVKTAAARYPNIREDAASSLPYKCGVVINVPISKTTNCH 114

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TAIR peptide
Match: AT4G33355.1 (| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr4:16067097-16067568 FORWARD LENGTH=119)

HSP 1 Score: 81.6481 bits (200), Expect = 2.396e-16
Identity = 36/92 (39.13%), Postives = 54/92 (58.70%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            A  C +    +  C  +L  G + PS  CC+G+  +K++A    +R+ AC C+K +AN  P I DD A  LP +CGVN+G P  + +DCN+I
Sbjct:   28 AIACPQVNMYLAQCLPYLKAGGN-PSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TAIR peptide
Match: AT4G33355.2 (| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr4:16067097-16067450 FORWARD LENGTH=117)

HSP 1 Score: 79.7221 bits (195), Expect = 9.104e-16
Identity = 35/90 (38.89%), Postives = 52/90 (57.78%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCN 351
            A  C +    +  C  +L  G + PS  CC+G+  +K++A    +R+ AC C+K +AN  P I DD A  LP +CGVN+G P  + +DCN
Sbjct:   28 AIACPQVNMYLAQCLPYLKAGGN-PSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCN 116

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TAIR peptide
Match: AT5G59320.1 (| Symbols: LTP3 | lipid transfer protein 3 | chr5:23929051-23929492 FORWARD LENGTH=115)

HSP 1 Score: 78.5666 bits (192), Expect = 2.028e-15
Identity = 36/92 (39.13%), Postives = 53/92 (57.61%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            A  CG    S+ PC ++L  G   P  SCC GV+ + S A T  +R+ AC C++  A +   +   LA+ LP +CGV++ YPI  + +CNNI
Sbjct:   24 AISCGTVAGSLAPCATYLSKGGLVPP-SCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNI 114

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TAIR peptide
Match: AT2G15050.3 (| Symbols: LTP, LTP7 | lipid transfer protein | chr2:6518888-6519888 FORWARD LENGTH=122)

HSP 1 Score: 77.411 bits (189), Expect = 4.518e-15
Identity = 39/96 (40.62%), Postives = 52/96 (54.17%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLI-GGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNF-PNIRDDLAASLPQRCGVNLGY--PIRRNMDCNNI 357
            A  CGE  S++ PC  +L  GG   P   CC+GVR +     T  +RR AC C+K  A N  P +  D AA +P+RCG+ + Y   IR N  CN +
Sbjct:   26 ALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCNTV 121

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TAIR peptide
Match: AT2G15050.1 (| Symbols: LTP, LTP7 | lipid transfer protein | chr2:6518888-6519259 FORWARD LENGTH=123)

HSP 1 Score: 76.2554 bits (186), Expect = 1.007e-14
Identity = 39/94 (41.49%), Postives = 51/94 (54.26%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLI-GGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNF-PNIRDDLAASLPQRCGVNLGY--PIRRNMDCN 351
            A  CGE  S++ PC  +L  GG   P   CC+GVR +     T  +RR AC C+K  A N  P +  D AA +P+RCG+ + Y   IR N  CN
Sbjct:   26 ALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TAIR peptide
Match: AT2G15050.2 (| Symbols: LTP, LTP7 | lipid transfer protein | chr2:6518888-6519888 FORWARD LENGTH=115)

HSP 1 Score: 72.0182 bits (175), Expect = 1.898e-13
Identity = 34/83 (40.96%), Postives = 46/83 (55.42%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLI-GGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNF-PNIRDDLAASLPQRCGVNLGY 324
            A  CGE  S++ PC  +L  GG   P   CC+GVR +     T  +RR AC C+K  A N  P +  D AA +P+RCG+ + Y
Sbjct:   26 ALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPY 108

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TAIR peptide
Match: AT2G18370.1 (| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr2:7980687-7981475 FORWARD LENGTH=116)

HSP 1 Score: 68.9366 bits (167), Expect = 1.607e-12
Identity = 29/93 (31.18%), Postives = 51/93 (54.84%), Query Frame = 1

Query:   79 NAFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            +A  C      + PC S+L  G   P  +CCDGV+ + ++ TT  +++ AC+C+K +AN+   ++ +LA +L   CG +L       +DC  +
Sbjct:   24 SAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKKAACQCIKSVANSV-TVKPELAQALASNCGASLPVDASPTVDCTTV 115

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TAIR peptide
Match: AT3G51590.1 (| Symbols: LTP12 | lipid transfer protein 12 | chr3:19135828-19136654 REVERSE LENGTH=119)

HSP 1 Score: 66.6254 bits (161), Expect = 7.975e-12
Identity = 31/93 (33.33%), Postives = 49/93 (52.69%), Query Frame = 1

Query:   79 NAFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            +   CG   S++  C ++L      PS  CC GV+ +   A T  +R+  CEC+K        +  DL A+LP  CGV++ YPI  + +C++I
Sbjct:   24 STIQCGTVTSTLAQCLTYLTNSGPLPS-QCCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TAIR peptide
Match: AT5G01870.1 (| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr5:337234-337678 FORWARD LENGTH=116)

HSP 1 Score: 65.4698 bits (158), Expect = 1.777e-11
Identity = 31/94 (32.98%), Postives = 54/94 (57.45%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELAN--NFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            A  C   Q+++ PC  +++ G   P  SCC+G+R +   AT+  +++  C C+K +    ++ +I    AA+LP +CGV L Y I  + +CN+I
Sbjct:   23 AISCNAVQANLYPCVVYVVQGGAIPY-SCCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSI 115

[Close]

BLAST of Lens_culinaris_v1_Contig374 vs. TAIR peptide
Match: AT5G59310.1 (| Symbols: LTP4 | lipid transfer protein 4 | chr5:23925296-23925772 REVERSE LENGTH=112)

HSP 1 Score: 63.929 bits (154), Expect = 5.170e-11
Identity = 33/92 (35.87%), Postives = 48/92 (52.17%), Query Frame = 1

Query:   82 AFDCGEAQSSVIPCGSFLIGGDDEPSTSCCDGVRFIKSSATTYEERRDACECMKELANNFPNIRDDLAASLPQRCGVNLGYPIRRNMDCNNI 357
            A  CG   SS+ PC  +L  G   P   CC GV+ +   A T  +R+ AC C++  A     +   LA+ LP +CGV++ YPI  + +C  I
Sbjct:   24 AITCGTVASSLSPCLGYLSKGGVVPPP-CCAGVKKLNGMAQTTPDRQQACRCLQSAAKG---VNPSLASGLPGKCGVSIPYPISTSTNCATI 111

The following BLAST results are available for this feature:

BLAST of Lens_culinaris_v1_Contig374 vs. SwissProt
BLAST of Lens_culinaris_v1_Contig374 vs. TrEMBL
BLAST of Lens_culinaris_v1_Contig374 vs. TAIR peptide

BLAST of Lens_culinaris_v1_Contig374 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
NLTP3_ORYSJ	6.498e-20	42.39	Non-specific lipid-transfer protein 3 OS=Oryza sat...	[more]
NLTP3_ORYSI	6.498e-20	42.39	Non-specific lipid-transfer protein 3 OS=Oryza sat...	[more]
NLTPA_RICCO	2.469e-19	47.78	Non-specific lipid-transfer protein A OS=Ricinus c...	[more]
NLTP1_WHEAT	1.355e-17	43.48	Non-specific lipid-transfer protein (Fragment) OS=...	[more]
NLTPB_RICCO	1.770e-17	43.33	Non-specific lipid-transfer protein B OS=Ricinus c...	[more]
NLT2B_ORYSJ	3.018e-17	42.39	Non-specific lipid-transfer protein 2B OS=Oryza sa...	[more]
NLTP2_ORYSI	8.782e-17	41.30	Non-specific lipid-transfer protein 2 OS=Oryza sat...	[more]
NLT2A_ORYSJ	8.782e-17	41.30	Non-specific lipid-transfer protein 2A OS=Oryza sa...	[more]
NLTP1_ORYSJ	1.268e-15	40.22	Non-specific lipid-transfer protein 1 OS=Oryza sat...	[more]
NLTP1_ORYSI	1.268e-15	40.22	Non-specific lipid-transfer protein 1 OS=Oryza sat...	[more]

BLAST of Lens_culinaris_v1_Contig374 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7E4W9_ORYSJ	8.279e-19	42.39	Non-specific lipid-transfer protein OS=Oryza sativ...	[more]
B9RD05_RICCO	2.409e-18	48.31	Non-specific lipid-transfer protein OS=Ricinus com...	[more]
A5C154_VITVI	2.409e-18	44.68	Non-specific lipid-transfer protein OS=Vitis vinif...	[more]
B9RD07_RICCO	3.146e-18	46.74	Non-specific lipid-transfer protein OS=Ricinus com...	[more]
Q2PCB9_WHEAT	3.478e-17	42.39	Non-specific lipid-transfer protein OS=Triticum ae...	[more]
Q2PCD9_WHEAT	5.933e-17	41.30	Non-specific lipid-transfer protein OS=Triticum ae...	[more]
C6SZR9_SOYBN	5.933e-17	40.66	Non-specific lipid-transfer protein OS=Glycine max...	[more]
C6T0U1_SOYBN	7.749e-17	42.86	Non-specific lipid-transfer protein OS=Glycine max...	[more]
Q8GZB0_WHEAT	1.726e-16	43.48	Non-specific lipid-transfer protein OS=Triticum ae...	[more]
B9SMA5_RICCO	1.726e-16	43.01	Non-specific lipid-transfer protein OS=Ricinus com...	[more]

BLAST of Lens_culinaris_v1_Contig374 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT4G33355.1	2.396e-16	39.13	\| Symbols: \| Bifunctional inhibitor/lipid-transfe...	[more]
AT4G33355.2	9.104e-16	38.89	\| Symbols: \| Bifunctional inhibitor/lipid-transfe...	[more]
AT5G59320.1	2.028e-15	39.13	\| Symbols: LTP3 \| lipid transfer protein 3 \| chr5:...	[more]
AT2G15050.3	4.518e-15	40.63	\| Symbols: LTP, LTP7 \| lipid transfer protein \| ch...	[more]
AT2G15050.1	1.007e-14	41.49	\| Symbols: LTP, LTP7 \| lipid transfer protein \| ch...	[more]
AT2G15050.2	1.898e-13	40.96	\| Symbols: LTP, LTP7 \| lipid transfer protein \| ch...	[more]
AT2G18370.1	1.607e-12	31.18	\| Symbols: \| Bifunctional inhibitor/lipid-transfe...	[more]
AT3G51590.1	7.975e-12	33.33	\| Symbols: LTP12 \| lipid transfer protein 12 \| chr...	[more]
AT5G01870.1	1.777e-11	32.98	\| Symbols: \| Bifunctional inhibitor/lipid-transfe...	[more]
AT5G59310.1	5.170e-11	35.87	\| Symbols: LTP4 \| lipid transfer protein 4 \| chr5:...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant lipid transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 28..44 score: 7.8e-19coord: 49..63 score: 7.8e-19coord: 70..85 score: 7.8e-19coord: 87..104 score: 7.8e-19coord: 105..116 score: 7.8
IPR000528	Plant lipid transfer protein/Par allergen	PROSITE	PS00597	PLANT_LTP	coord: 96..117 score
IPR003612	Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor	PFAM	PF00234	Tryp_alpha_amyl	coord: 29..106 score: 1.3
IPR003612	Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor	SMART	SM00499	no description	coord: 29..114 score: 0
IPR013770	Plant lipid transfer protein/hydrophobic protein, helical domain	GENE3D	1.10.110.10	no description	coord: 27..117 score: 2.3
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 27..118 score: 4.8
None	No IPR available	SEG	seg	seg	coord: 7..19 score
None	No IPR available	SEG	seg	seg	coord: 36..46 score
None	No IPR available	SEG	seg	seg	coord: 58..67 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Lens_culinaris_v1_Contig374 ID=Lens_culinaris_v1_Contig374; Name=Lens_culinaris_v1_Contig374; organism=Lens culinaris; type=contig; length=500bp
GTTTAAAGAAACAAGATGAAGAACTTGAGTATGATTCTAATATTTCTAGC
TCTATTGCTCCTCACTACGGAGCAAGTGAATGCTTTTGATTGCGGAGAAG
CACAGTCATCTGTAATTCCTTGTGGATCATTTCTCATAGGTGGTGATGAC
GAGCCATCAACTAGTTGTTGCGATGGCGTTAGATTTATAAAATCTTCAGC
AACCACTTATGAAGAACGTCGTGACGCATGTGAATGCATGAAAGAATTGG
CTAATAACTTCCCTAATATTAGAGATGATTTAGCTGCCTCACTTCCCCAA
CGTTGCGGTGTTAACTTAGGTTATCCTATAAGGAGAAACATGGATTGCAA
TAACATTCCTTGAACTAAATGAAGAAAATAATAAACTAAAGAGGGTGGAC
ACTTGGTTGTTCTTATATAAATAATACAACCCTCTGTAATATGTTCTATG
ATGGTGTAAAATATAAAAGTTGATGTTAATAAATATATGATATTTATATT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Biological Process**
Term	Definition
GO:0006869	lipid transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0008289	lipid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR000528	Plant_nsLTP
IPR003612	Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor
IPR013770	Plant lipid transfer protein/hydrophobic protein helical domain
IPR016140	Bifunc_inhib/LTP/seed_store

Search form

Lens_culinaris_v1_Contig374