Lens_culinaris_v1_Contig472

Contig Overview


Name	Lens_culinaris_v1_Contig472
Unique Name	Lens_culinaris_v1_Contig472
Type	contig
Organism	Lens culinaris (lentil)
Sequence length	624

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	contig

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GT626965	GT626965	Lens culinaris	EST
GT624518	GT624518	Lens culinaris	EST
GT619511	GT619511	Lens culinaris	EST
GT625212	GT625212	Lens culinaris	EST

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
KEGG analysis for Lens culinaris unigene v1	2011-01-05
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
GT626965	EST	GT626965:1..619 +
GT624518	EST	GT624518:1..576 +
GT619511	EST	GT619511:1..554 +
GT625212	EST	GT625212:49..625 +

Homology

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. SwissProt
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 176.407 bits (446), Expect = 1.040e-43
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   57 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. SwissProt
Match: H2B7_ARATH (Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030 PE=1 SV=3)

HSP 1 Score: 176.022 bits (445), Expect = 1.358e-43
Identity = 90/92 (97.83%), Postives = 92/92 (100.00%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA+ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   54 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. SwissProt
Match: H2B6_ARATH (Histone H2B.6 OS=Arabidopsis thaliana GN=H2B PE=1 SV=3)

HSP 1 Score: 176.022 bits (445), Expect = 1.358e-43
Identity = 90/92 (97.83%), Postives = 92/92 (100.00%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA+ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   59 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. SwissProt
Match: H2B3_MEDTR (Probable histone H2B.3 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 176.022 bits (445), Expect = 1.358e-43
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   47 SVETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 138

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. SwissProt
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 175.252 bits (443), Expect = 2.316e-43
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   56 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. SwissProt
Match: H2B_CAPAN (Histone H2B OS=Capsicum annuum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 3.025e-43
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            S+ETYKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   54 SIETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. SwissProt
Match: H2B10_ARATH (Histone H2B.10 OS=Arabidopsis thaliana GN=At5g22880 PE=1 SV=3)

HSP 1 Score: 174.481 bits (441), Expect = 3.951e-43
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   54 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. SwissProt
Match: H2B3_SOLLC (Histone H2B.3 (Fragment) OS=Solanum lycopersicum GN=H2B-3 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.160e-43
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   46 AVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 137

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. SwissProt
Match: H2B1_ARATH (Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790 PE=1 SV=3)

HSP 1 Score: 174.096 bits (440), Expect = 5.160e-43
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   57 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. SwissProt
Match: H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 174.096 bits (440), Expect = 5.160e-43
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   59 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TrEMBL
Match: Q2XPW1_SOLTU (Histone H2B OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.478e-42
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   55 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 146

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TrEMBL
Match: D7SKK3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025021001 PE=4 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.478e-42
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   26 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 117

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TrEMBL
Match: C6T1C4_SOYBN (Histone H2B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.478e-42
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   47 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 138

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TrEMBL
Match: C6SWY5_SOYBN (Histone H2B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.478e-42
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   57 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TrEMBL
Match: C6SWE9_SOYBN (Histone H2B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.478e-42
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   46 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 137

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TrEMBL
Match: B9T761_RICCO (Histone H2B OS=Ricinus communis GN=RCOM_0272700 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.478e-42
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   44 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 135

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TrEMBL
Match: B9T302_RICCO (Histone H2B OS=Ricinus communis GN=RCOM_0350190 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.478e-42
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   50 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 141

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TrEMBL
Match: B9T301_RICCO (Histone H2B OS=Ricinus communis GN=RCOM_0350180 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.478e-42
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   50 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 141

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TrEMBL
Match: B9HUW2_POPTR (Histone H2B (Fragment) OS=Populus trichocarpa GN=HTB902 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.478e-42
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    2 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 93

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TrEMBL
Match: B3SGL7_MEDTR (Histone H2B OS=Medicago truncatula PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.478e-42
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   46 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 137

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TAIR peptide
Match: AT3G45980.1 (| Symbols: H2B, HTB9 | Histone superfamily protein | chr3:16897492-16897944 REVERSE LENGTH=150)

HSP 1 Score: 176.022 bits (445), Expect = 1.406e-44
Identity = 90/92 (97.83%), Postives = 92/92 (100.00%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA+ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   59 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TAIR peptide
Match: AT3G46030.1 (| Symbols: HTB11 | Histone superfamily protein | chr3:16913614-16914051 REVERSE LENGTH=145)

HSP 1 Score: 176.022 bits (445), Expect = 1.406e-44
Identity = 90/92 (97.83%), Postives = 92/92 (100.00%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA+ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   54 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TAIR peptide
Match: AT5G22880.1 (| Symbols: H2B, HTB2 | histone B2 | chr5:7652130-7652567 REVERSE LENGTH=145)

HSP 1 Score: 174.481 bits (441), Expect = 4.090e-44
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   54 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TAIR peptide
Match: AT5G59910.1 (| Symbols: HTB4 | Histone superfamily protein | chr5:24127206-24127658 FORWARD LENGTH=150)

HSP 1 Score: 174.096 bits (440), Expect = 5.342e-44
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   59 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TAIR peptide
Match: AT1G07790.1 (| Symbols: HTB1 | Histone superfamily protein | chr1:2413049-2413495 FORWARD LENGTH=148)

HSP 1 Score: 174.096 bits (440), Expect = 5.342e-44
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   57 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TAIR peptide
Match: AT5G02570.1 (| Symbols: | Histone superfamily protein | chr5:576742-577140 REVERSE LENGTH=132)

HSP 1 Score: 173.326 bits (438), Expect = 9.112e-44
Identity = 89/92 (96.74%), Postives = 89/92 (96.74%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            S ETYKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   41 STETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 132

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TAIR peptide
Match: AT2G28720.1 (| Symbols: | Histone superfamily protein | chr2:12327043-12327498 FORWARD LENGTH=151)

HSP 1 Score: 172.555 bits (436), Expect = 1.554e-43
Identity = 88/92 (95.65%), Postives = 90/92 (97.83%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            S ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   60 STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TAIR peptide
Match: AT3G53650.1 (| Symbols: | Histone superfamily protein | chr3:19889358-19889774 FORWARD LENGTH=138)

HSP 1 Score: 172.17 bits (435), Expect = 2.030e-43
Identity = 87/92 (94.57%), Postives = 90/92 (97.83%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            ++ETYKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGEL+KHAVSEGTKAVTKFTSS
Sbjct:   47 NIETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELSKHAVSEGTKAVTKFTSS 138

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TAIR peptide
Match: AT2G37470.1 (| Symbols: | Histone superfamily protein | chr2:15736832-15737248 FORWARD LENGTH=138)

HSP 1 Score: 171.785 bits (434), Expect = 2.651e-43
Identity = 87/91 (95.60%), Postives = 89/91 (97.80%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 472
            SVETYKIYIFKVLKQVHPD+GIS KAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct:   48 SVETYKIYIFKVLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 138

[Close]

BLAST of Lens_culinaris_v1_Contig472 vs. TAIR peptide
Match: AT3G09480.1 (| Symbols: | Histone superfamily protein | chr3:2914890-2915270 REVERSE LENGTH=126)

HSP 1 Score: 169.859 bits (429), Expect = 1.007e-42
Identity = 86/92 (93.48%), Postives = 88/92 (95.65%), Query Frame = 2

Query:  200 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 475
            S ETYKIY+FKVLKQVHPDIGIS KAMGIMNSFIND FEK+A ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   35 STETYKIYLFKVLKQVHPDIGISGKAMGIMNSFINDTFEKIALESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 126

The following BLAST results are available for this feature:

BLAST of Lens_culinaris_v1_Contig472 vs. SwissProt
BLAST of Lens_culinaris_v1_Contig472 vs. TrEMBL
BLAST of Lens_culinaris_v1_Contig472 vs. TAIR peptide

BLAST of Lens_culinaris_v1_Contig472 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
H2B1_MEDTR	1.040e-43	98.91	Probable histone H2B.1 OS=Medicago truncatula PE=3...	[more]
H2B7_ARATH	1.358e-43	97.83	Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030...	[more]
H2B6_ARATH	1.358e-43	97.83	Histone H2B.6 OS=Arabidopsis thaliana GN=H2B PE=1 ...	[more]
H2B3_MEDTR	1.358e-43	97.83	Probable histone H2B.3 OS=Medicago truncatula PE=3...	[more]
H2B_GOSHI	2.316e-43	97.83	Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV...	[more]
H2B_CAPAN	3.025e-43	96.74	Histone H2B OS=Capsicum annuum GN=HIS2B PE=2 SV=3	[more]
H2B10_ARATH	3.951e-43	96.74	Histone H2B.10 OS=Arabidopsis thaliana GN=At5g2288...	[more]
H2B3_SOLLC	5.160e-43	96.74	Histone H2B.3 (Fragment) OS=Solanum lycopersicum G...	[more]
H2B1_ARATH	5.160e-43	96.74	Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790...	[more]
H2B11_ARATH	5.160e-43	96.74	Histone H2B.11 OS=Arabidopsis thaliana GN=At5g5991...	[more]

BLAST of Lens_culinaris_v1_Contig472 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q2XPW1_SOLTU	1.478e-42	98.91	Histone H2B OS=Solanum tuberosum PE=2 SV=1	[more]
D7SKK3_VITVI	1.478e-42	98.91	Whole genome shotgun sequence of line PN40024, sca...	[more]
C6T1C4_SOYBN	1.478e-42	98.91	Histone H2B OS=Glycine max PE=2 SV=1	[more]
C6SWY5_SOYBN	1.478e-42	98.91	Histone H2B OS=Glycine max PE=2 SV=1	[more]
C6SWE9_SOYBN	1.478e-42	98.91	Histone H2B OS=Glycine max PE=2 SV=1	[more]
B9T761_RICCO	1.478e-42	98.91	Histone H2B OS=Ricinus communis GN=RCOM_0272700 PE...	[more]
B9T302_RICCO	1.478e-42	98.91	Histone H2B OS=Ricinus communis GN=RCOM_0350190 PE...	[more]
B9T301_RICCO	1.478e-42	98.91	Histone H2B OS=Ricinus communis GN=RCOM_0350180 PE...	[more]
B9HUW2_POPTR	1.478e-42	98.91	Histone H2B (Fragment) OS=Populus trichocarpa GN=H...	[more]
B3SGL7_MEDTR	1.478e-42	98.91	Histone H2B OS=Medicago truncatula PE=3 SV=1	[more]

BLAST of Lens_culinaris_v1_Contig472 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT3G45980.1	1.406e-44	97.83	\| Symbols: H2B, HTB9 \| Histone superfamily protein...	[more]
AT3G46030.1	1.406e-44	97.83	\| Symbols: HTB11 \| Histone superfamily protein \| c...	[more]
AT5G22880.1	4.090e-44	96.74	\| Symbols: H2B, HTB2 \| histone B2 \| chr5:7652130-7...	[more]
AT5G59910.1	5.342e-44	96.74	\| Symbols: HTB4 \| Histone superfamily protein \| ch...	[more]
AT1G07790.1	5.342e-44	96.74	\| Symbols: HTB1 \| Histone superfamily protein \| ch...	[more]
AT5G02570.1	9.112e-44	96.74	\| Symbols: \| Histone superfamily protein \| chr5:5...	[more]
AT2G28720.1	1.554e-43	95.65	\| Symbols: \| Histone superfamily protein \| chr2:1...	[more]
AT3G53650.1	2.030e-43	94.57	\| Symbols: \| Histone superfamily protein \| chr3:1...	[more]
AT2G37470.1	2.651e-43	95.60	\| Symbols: \| Histone superfamily protein \| chr2:1...	[more]
AT3G09480.1	1.007e-42	93.48	\| Symbols: \| Histone superfamily protein \| chr3:2...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 66..84 score: 1.8e-49coord: 85..105 score: 1.8e-49coord: 107..124 score: 1.8e-49coord: 124..137 score: 1.8e-49coord: 137..150 score: 1.8
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 7..153 score: 6.6e
IPR000558	Histone H2B	SMART	SM00427	no description	coord: 56..152 score: 6.5
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 121..143 score
IPR007125	Histone core	PFAM	PF00125	Histone	coord: 62..129 score: 8.8
IPR009072	Histone-fold	GENE3D	1.10.20.10	no description	coord: 32..153 score: 1.8
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 33..153 score: 6.7
None	No IPR available	SEG	seg	seg	coord: 8..24 score: NAcoord: 28..61 score
None	No IPR available	SEG	seg	seg	coord: 1..22 score: NAcoord: 33..52 score
None	No IPR available	SEG	seg	seg	coord: 7..41 score: NAcoord: 45..61 score
None	No IPR available	SEG	seg	seg	coord: 17..31 score: NAcoord: 39..76 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Lens_culinaris_v1_Contig472 ID=Lens_culinaris_v1_Contig472; Name=Lens_culinaris_v1_Contig472; organism=Lens culinaris; type=contig; length=624bp
TAAATCAAAGCCCTAAATTTTCATTTTTTCAATGGCGCCAAAAGGAGAGA
AGAAACCAGCTGAGAAGAAACCTGTAGAGGAGAAGAAGTCCACCATTGCT
GAGAAGACTCCTGCTGAGAAGAAGCCAAAGGCCGGAAAGAAGCTGCCTAA
GGATGGTGGTGCCGCCGCCGGAGACAAGAAGAAGAAGAGGAACAAGAAGA
GCGTTGAGACGTACAAGATCTACATCTTCAAGGTTCTGAAACAAGTTCAC
CCAGACATCGGTATCTCAAGCAAGGCCATGGGAATCATGAACAGTTTCAT
AAACGACATCTTCGAGAAGCTAGCTGCAGAGTCATCAAGACTTGCAAGGT
ACAACAAGAAGCCAACAATCACTTCAAGGGAAATTCAGACTGCGGTCAGG
CTTGTTCTGCCCGGTGAATTGGCCAAGCATGCCGTCTCTGAGGGAACCAA
AGCTGTGACTAAGTTCACTAGTTCTTAGATCTGTAAATTTTGTTTTCCGT
TAGGGTTGTTGTTTGTTGGTTGTTTATGAGATTGTAAGTTGGAGTGAAGT
ATTAGAAACCGTTCAATCGTGTATGATAATGGTGGATTTTATGATAATAT
ATTTCAAAATGACTTGGAAGGGTA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Cellular Component**
Term	Definition
GO:0000786	nucleosome
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006334	nucleosome assembly

Vocabulary: **INTERPRO**
Term	Definition
IPR000558	Histone_H2B
IPR007125	Histone_H2A/H2B/H3
IPR009072	Histone-fold

Search form

Lens_culinaris_v1_Contig472