Lens_culinaris_v1_Contig490

Contig Overview
NameLens_culinaris_v1_Contig490
Unique NameLens_culinaris_v1_Contig490
Typecontig
OrganismLens culinaris (lentil)
Sequence length733
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GT624535GT624535Lens culinarisEST
GT626782GT626782Lens culinarisEST
GT625897GT625897Lens culinarisEST
GT626600GT626600Lens culinarisEST


Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
InterProScan analysis for Lens culinaris unigene v12011-01-06
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GT624535ESTGT624535:245..678 +
GT626782ESTGT626782:1..733 -
GT625897ESTGT625897:247..732 +
GT626600ESTGT626600:56..733 -
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015157Translation machinery associated TMA7PFAMPF09072TMA7coord: 7..69
score: 8.9
NoneNo IPR availableSEGsegsegcoord: 9..26
score: NAcoord: 37..52
score: NAcoord: 53..69
score
NoneNo IPR availableSEGsegsegcoord: 26..47
score

Sequences
The following sequences are available for this feature:

contig sequence

>Lens_culinaris_v1_Contig490 ID=Lens_culinaris_v1_Contig490; Name=Lens_culinaris_v1_Contig490; organism=Lens culinaris; type=contig; length=733bp
TTATGAGAACATTCATCATCGTCATCTTCAATATTTAAACGAAAGTCATC
AAAACTTTGAACTACTGTTATTGCCTGAAACCACATCACAATCAACAAAA
ACTAACTATTATGAAAAACTAACGATCGGTTGAAGATGGAGTTTTAAATT
TTTGACACAACATCTGATATATTCATACAAGGTCCAATAGACATGTAACC
AGAAACTAAGAGGAATACGGACTCCAAAATAATATTTAGACAATTCCTTT
CTTTGTCGCGAGCTGTTATTTTCTCTGTCGTTTTCGTATTCAGACCAAAC
CCTAACTCTGCACCGTAACCATGTCGACCAAGCAAGGTGGAAAAGCTAAG
CCTTTGAAGAAACCAAAGTCTGATAAGAAGGATTACGATGAGGTTGACAT
GGCTAACATCCAGAAGAAAAAGGATGAGGAGAAGGCACTAAAGGAGTTGA
AAGCTAAGGCCTCACAGAAGGGATCTTTTGGAGGATCTGGCCTCAAGAAA
AGTGGGAAGAAATAGAAGGGCTCTTTGTCATGAATTCAATTTTCATTATG
GAGCTCTGTAATTACTATTATGATCATGAAAACTTCTCTTATTGTGTGAC
CTGTTTTATTGCTGATGTTAGTTCTAAATCAAAGCATGTTATGATGATGT
AAACGCAATAAGTTACTGCTTTGTAGCTCTATTGTGTCTCCCTTTAGGGT
TATGATAATTACATCTGTTTACTTGCTGATGTT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR015157TMA7