Lens_culinaris_v1_Contig527

Contig Overview


Name	Lens_culinaris_v1_Contig527
Unique Name	Lens_culinaris_v1_Contig527
Type	contig
Organism	Lens culinaris (lentil)
Sequence length	743

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	contig

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GT620595	GT620595	Lens culinaris	EST
GT626024	GT626024	Lens culinaris	EST

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
GT620595	EST	GT620595:1..693 -
GT626024	EST	GT626024:387..743 +

Homology

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. SwissProt
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.320e-48
Identity = 90/119 (75.63%), Postives = 103/119 (86.55%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            IPHSDKRFAG+ K  ++LD E+HRKYIFGGHV AYM+TL+EDEPEKYQ+HFS+YIKKGIEAD +E LYKKVHAAIRA+P  KKS K  PK HKRYNLKKLTYDER+ +L+ RL ALNSA
Sbjct:  172 IPHSDKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADELEGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSA 290

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. SwissProt
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 9.660e-48
Identity = 91/119 (76.47%), Postives = 103/119 (86.55%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            IPHSDKRFAGF KE K+LDAEIHR YI+GGHV+ YMK L EDEPEK QTHFS YIKKG+EA+ IEELYKKVHAAIRADP+ KK+ K  PK+HKRYNLKKLTY+ER+ KLI R++ALN A
Sbjct:  172 IPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGA 290

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. SwissProt
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3)

HSP 1 Score: 189.889 bits (481), Expect = 1.262e-47
Identity = 90/119 (75.63%), Postives = 103/119 (86.55%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            IPHSDKRFAGF KE K+LDAEIHR YI+GGHV+ YMK L EDEPEK QTHFS YIKKG+EA+ IEE+YKKVHAAIRA+P+ KK+ K  PKEHKRYNLKKLTY+ER+ KLI R++ALN A
Sbjct:  172 IPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGA 290

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. SwissProt
Match: RL52_ORYSJ (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.542e-45
Identity = 81/119 (68.07%), Postives = 104/119 (87.39%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            IPHSDKRFAGF K++K+LD++IHRKYI+GGHV  YM+++ E+EPEK+Q HFS+Y+KKGI+ADG+E LYKKVHAAIRADP++ KS K+ P  HKRYNLKKLTY++R+  L+ RL ALNS+
Sbjct:  173 IPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMESLYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSS 291

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. SwissProt
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.014e-45
Identity = 81/119 (68.07%), Postives = 104/119 (87.39%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            IPHSDKRFAGF K++K+LD++IHRKYI+GGHV  YM+++ E+EPEK+Q HFS+Y+KKGI+ADG+E LYKKVHAAIRADP++ KS K+ P  HKRYNLKKLTY++R+  L+ RL ALNS+
Sbjct:  173 IPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSS 291

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. SwissProt
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 2.014e-45
Identity = 81/119 (68.07%), Postives = 104/119 (87.39%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            IPHSDKRFAGF K++K+LD++IHRKYI+GGHV  YM+++ E+EPEK+Q HFS+Y+KKGI+ADG+E LYKKVHAAIRADP++ KS K+ P  HKRYNLKKLTY++R+  L+ RL ALNS+
Sbjct:  173 IPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSS 291

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. SwissProt
Match: RL5_SOLME (60S ribosomal protein L5 (Fragment) OS=Solanum melongena GN=RPL5 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.010e-41
Identity = 79/107 (73.83%), Postives = 90/107 (84.11%), Query Frame = 1

Query:  133 KEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            K+ K+LDAE+HRKYI+GGHV AYM  L+EDEPEKYQ+HFS YIK  +  D IEE+YKKVHAAIR DPS KKS KQPPK HKRYNLKKLTY+ER+ KLI RL ALN+A
Sbjct:    3 KDSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVHAAIRPDPSPKKSQKQPPKTHKRYNLKKLTYEERKAKLIERLNALNAA 109

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. SwissProt
Match: RL5_LYSTE (60S ribosomal protein L5 OS=Lysiphlebus testaceipes GN=RpL5 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.713e-28
Identity = 60/109 (55.05%), Postives = 75/109 (68.81%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKL 423
            IPHS KRF G+D E K  +A++HR++IF  H+  YMKTL E+EPE +Q  FSQYIK GI ADGIEE+YKK H AIRADP   +  K      KR+N  KLT  ER+ ++
Sbjct:  173 IPHSTKRFPGYDNESKSFNADVHRQHIFAHHIANYMKTLEENEPENFQRQFSQYIKNGITADGIEEMYKKAHEAIRADPDRAEIVKTKEPVKKRWNRAKLTLSERKDRV 281

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. SwissProt
Match: RL5_NEUCR (60S ribosomal protein L5 OS=Neurospora crassa GN=rpl-5 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.400e-27
Identity = 60/126 (47.62%), Postives = 85/126 (67.46%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHK--------RYNLKKLTYDERRTKLIARLEALNS 450
            IPHS+ RF G+D E +ELDAE  +KYIFGGHV  YM+TL +D+ E+Y++ F++YI+  +EADG+E+LY + HAAIR DP  KK+  + PK+ K        +Y   KLT ++R   +  R+ AL S
Sbjct:  176 IPHSENRFPGYDMESEELDAETLKKYIFGGHVAEYMETLADDDEERYKSQFNRYIEDDLEADGLEDLYAEAHAAIREDP-FKKAESEAPKKTKEEWKAESLKYKKSKLTREQRAAGVQERIAALRS 300

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. SwissProt
Match: RL5_STYCL (60S ribosomal protein L5 OS=Styela clava GN=RPL5 PE=3 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 2.094e-26
Identity = 57/109 (52.29%), Postives = 76/109 (69.72%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKL 423
            IPHS KRF G+D E  +  AE+HR +IFGGHV+ YMK L E++ E ++  FSQYIK G+ AD +EE+Y K HAAIR DP+ KK      K  KR+N KK+T+ +RR ++
Sbjct:  173 IPHSTKRFPGYDDESGDFSAEVHRSHIFGGHVSNYMKELEEEDEEAFKRQFSQYIKHGVTADTVEEMYTKAHAAIREDPTPKKKTDFAGKT-KRWNRKKMTFSQRRDRV 280

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. TrEMBL
Match: Q9AVH1_PEA (Putative senescence-associated protein OS=Pisum sativum GN=ssa-15 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 1.367e-60
Identity = 115/120 (95.83%), Postives = 118/120 (98.33%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSAV 456
            IPHSDKRFAGFDKEKKELDAE+HRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADP+ KK+ KQPPKEHKRYNLKKLTYDERRTKLIARLEALNSAV
Sbjct:  152 IPHSDKRFAGFDKEKKELDAEVHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPANKKAEKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSAV 271

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. TrEMBL
Match: B7FJX5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.848e-57
Identity = 106/120 (88.33%), Postives = 117/120 (97.50%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSAV 456
            IPHSDKRFAGFDKEKKELDAE+HRKYIFGGHV+AYMKTLIEDEPEKYQTHFS+YIKKGIEADG+EELYKKVHAAIRADP+IKKS KQPPK+HKRYNLKKLTY+ER+ KL++RL ALN+AV
Sbjct:  172 IPHSDKRFAGFDKEKKELDAEVHRKYIFGGHVSAYMKTLIEDEPEKYQTHFSEYIKKGIEADGLEELYKKVHAAIRADPTIKKSEKQPPKQHKRYNLKKLTYEERKAKLVSRLAALNAAV 291

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. TrEMBL
Match: C6TL04_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 6.573e-55
Identity = 102/119 (85.71%), Postives = 112/119 (94.12%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            IPHSDKRFAGFDKEKKELDAE+HRKY+FGGHV AYMK L EDEPEKYQ+HFS+YIK+GIEADGIE LYKKVHAAIRADPS+KKS KQPPKEHKRYNLKKLTY+ER+ KLIAR+ A+NSA
Sbjct:  172 IPHSDKRFAGFDKEKKELDAEVHRKYVFGGHVAAYMKILAEDEPEKYQSHFSEYIKRGIEADGIEALYKKVHAAIRADPSLKKSEKQPPKEHKRYNLKKLTYEERKAKLIARVAAINSA 290

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. TrEMBL
Match: A9PFA8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_827713 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.979e-51
Identity = 94/119 (78.99%), Postives = 110/119 (92.44%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            IPHSDKRFAGF K+ K+LDAE+HRKYI+GGHV AYM+TL+EDEPEKYQ+HFS+Y+K+GI+ADG+E LYKKVHAAIRADP+ KKS KQPPKEHKRYNLKKLTY+ER+ KL+ RL ALNSA
Sbjct:  172 IPHSDKRFAGFAKDNKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFSEYLKRGIDADGMEALYKKVHAAIRADPTAKKSEKQPPKEHKRYNLKKLTYEERKAKLVERLNALNSA 290

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. TrEMBL
Match: B9SFU0_RICCO (Ribosomal protein L5, putative OS=Ricinus communis GN=RCOM_0723170 PE=4 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.675e-50
Identity = 95/119 (79.83%), Postives = 108/119 (90.76%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            IPHS+KRFAGF K+ K+LD+E+HRKYI+GGHV AYM TL+EDEPEKYQ+HFS+YIK G+EAD IE LYKKVHAAIRADPS KKS KQPPKEHKRYNLKKLTY+ER+ KLI RL+ALNSA
Sbjct:  172 IPHSEKRFAGFSKDGKQLDSEVHRKYIYGGHVAAYMNTLMEDEPEKYQSHFSKYIKSGVEADDIEALYKKVHAAIRADPSPKKSEKQPPKEHKRYNLKKLTYEERKAKLIERLQALNSA 290

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. TrEMBL
Match: B9SEY9_RICCO (Ribosomal protein L5, putative OS=Ricinus communis GN=RCOM_1211400 PE=4 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.188e-50
Identity = 92/119 (77.31%), Postives = 109/119 (91.60%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            IPHS+KRFAGF+KE K+LD+E+HRKYI+GGHV AYM+ L+EDEPEKYQ+HFS+YIKKG++ D +EE+YKKVHAAIRADPS KK+ KQPPKEHKRYNLKKLTY+ER+ KLI RL ALNSA
Sbjct:  172 IPHSEKRFAGFNKESKQLDSEVHRKYIYGGHVAAYMRMLLEDEPEKYQSHFSEYIKKGVDPDNMEEMYKKVHAAIRADPSAKKTEKQPPKEHKRYNLKKLTYEERKAKLIERLTALNSA 290

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. TrEMBL
Match: Q38HU5_SOLTU (Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.732e-50
Identity = 93/119 (78.15%), Postives = 107/119 (89.92%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            IPHS+KRFAG+ K+ K+LDAE+HRK+I+GGHVTAYM TL+EDEPEKYQTHFS YIK G+EAD +EE+YKKVHAAIRADP  KKSGKQPPK HKRYNLKKLTY+ER+ KLI RL ALN+A
Sbjct:  172 IPHSEKRFAGYSKDSKQLDAEVHRKFIYGGHVTAYMNTLMEDEPEKYQTHFSLYIKAGLEADNLEEMYKKVHAAIRADPCPKKSGKQPPKTHKRYNLKKLTYEERKAKLIERLNALNAA 290

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. TrEMBL
Match: D7T2H3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_94.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00038188001 PE=4 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.732e-50
Identity = 95/119 (79.83%), Postives = 107/119 (89.92%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            IPHSDKRFAGF K+ K+LDAE+HRKYI+GGHV+AYM TLIEDEPEKYQ+HFS+YIKKG+E D IEE+YKKVHAAIRA+P  KK  KQPPKEHKRYNLKKLTY+ER+ KLI RL ALNSA
Sbjct:  204 IPHSDKRFAGFSKDSKQLDAEVHRKYIYGGHVSAYMGTLIEDEPEKYQSHFSEYIKKGVEPDDIEEMYKKVHAAIRANPIQKKVEKQPPKEHKRYNLKKLTYEERKAKLIERLNALNSA 322

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. TrEMBL
Match: B9IAZ4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_732569 PE=4 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 6.366e-50
Identity = 93/119 (78.15%), Postives = 109/119 (91.60%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            IPHSDKRFAGF+K+ K+LDAE+HRKYI+GGHV AYM+ L+EDEPEKYQ+HFS+YIK+GIE D +EELYKKVHAAIRADP+ KKS KQ PKEHKRYNLKKLTY+ER+ KL+ RL+ALNSA
Sbjct:  172 IPHSDKRFAGFNKDGKQLDAEVHRKYIYGGHVAAYMRNLMEDEPEKYQSHFSEYIKRGIEPDNMEELYKKVHAAIRADPTAKKSEKQLPKEHKRYNLKKLTYEERKAKLVERLKALNSA 290

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. TrEMBL
Match: A9PB43_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 6.366e-50
Identity = 93/119 (78.15%), Postives = 109/119 (91.60%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            IPHSDKRFAGF+K+ K+LDAE+HRKYI+GGHV AYM+ L+EDEPEKYQ+HFS+YIK+GIE D +EELYKKVHAAIRADP+ KKS KQ PKEHKRYNLKKLTY+ER+ KL+ RL+ALNSA
Sbjct:  172 IPHSDKRFAGFNKDGKQLDAEVHRKYIYGGHVAAYMRNLMEDEPEKYQSHFSEYIKRGIEPDNMEELYKKVHAAIRADPTAKKSEKQLPKEHKRYNLKKLTYEERKAKLVERLKALNSA 290

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. TAIR peptide
Match: AT3G25520.2 (| Symbols: ATL5 | ribosomal protein L5 | chr3:9269573-9270434 REVERSE LENGTH=190)

HSP 1 Score: 190.274 bits (482), Expect = 9.608e-49
Identity = 91/119 (76.47%), Postives = 103/119 (86.55%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            IPHSDKRFAGF KE K+LDAEIHR YI+GGHV+ YMK L EDEPEK QTHFS YIKKG+EA+ IEELYKKVHAAIRADP+ KK+ K  PK+HKRYNLKKLTY+ER+ KLI R++ALN A
Sbjct:   61 IPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGA 179

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. TAIR peptide
Match: AT3G25520.1 (| Symbols: ATL5, PGY3, OLI5, RPL5A | ribosomal protein L5 | chr3:9269573-9271327 REVERSE LENGTH=301)

HSP 1 Score: 190.274 bits (482), Expect = 9.608e-49
Identity = 91/119 (76.47%), Postives = 103/119 (86.55%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            IPHSDKRFAGF KE K+LDAEIHR YI+GGHV+ YMK L EDEPEK QTHFS YIKKG+EA+ IEELYKKVHAAIRADP+ KK+ K  PK+HKRYNLKKLTY+ER+ KLI R++ALN A
Sbjct:  172 IPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGA 290

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. TAIR peptide
Match: AT5G39740.2 (| Symbols: RPL5B | ribosomal protein L5 B | chr5:15903484-15905185 FORWARD LENGTH=301)

HSP 1 Score: 189.889 bits (481), Expect = 1.255e-48
Identity = 90/119 (75.63%), Postives = 103/119 (86.55%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            IPHSDKRFAGF KE K+LDAEIHR YI+GGHV+ YMK L EDEPEK QTHFS YIKKG+EA+ IEE+YKKVHAAIRA+P+ KK+ K  PKEHKRYNLKKLTY+ER+ KLI R++ALN A
Sbjct:  172 IPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGA 290

[Close]

BLAST of Lens_culinaris_v1_Contig527 vs. TAIR peptide
Match: AT5G39740.1 (| Symbols: OLI7, RPL5B | ribosomal protein L5 B | chr5:15903365-15905185 FORWARD LENGTH=301)

HSP 1 Score: 189.889 bits (481), Expect = 1.255e-48
Identity = 90/119 (75.63%), Postives = 103/119 (86.55%), Query Frame = 1

Query:   97 IPHSDKRFAGFDKEKKELDAEIHRKYIFGGHVTAYMKTLIEDEPEKYQTHFSQYIKKGIEADGIEELYKKVHAAIRADPSIKKSGKQPPKEHKRYNLKKLTYDERRTKLIARLEALNSA 453
            IPHSDKRFAGF KE K+LDAEIHR YI+GGHV+ YMK L EDEPEK QTHFS YIKKG+EA+ IEE+YKKVHAAIRA+P+ KK+ K  PKEHKRYNLKKLTY+ER+ KLI R++ALN A
Sbjct:  172 IPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGA 290

The following BLAST results are available for this feature:

BLAST of Lens_culinaris_v1_Contig527 vs. SwissProt
BLAST of Lens_culinaris_v1_Contig527 vs. TrEMBL
BLAST of Lens_culinaris_v1_Contig527 vs. TAIR peptide

BLAST of Lens_culinaris_v1_Contig527 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL5_CUCSA	3.320e-48	75.63	60S ribosomal protein L5 OS=Cucumis sativus GN=RPL...	[more]
RL51_ARATH	9.660e-48	76.47	60S ribosomal protein L5-1 OS=Arabidopsis thaliana...	[more]
RL52_ARATH	1.262e-47	75.63	60S ribosomal protein L5-2 OS=Arabidopsis thaliana...	[more]
RL52_ORYSJ	1.542e-45	68.07	60S ribosomal protein L5-2 OS=Oryza sativa subsp. ...	[more]
RL51_ORYSJ	2.014e-45	68.07	60S ribosomal protein L5-1 OS=Oryza sativa subsp. ...	[more]
RL51_ORYSI	2.014e-45	68.07	60S ribosomal protein L5-1 OS=Oryza sativa subsp. ...	[more]
RL5_SOLME	3.010e-41	73.83	60S ribosomal protein L5 (Fragment) OS=Solanum mel...	[more]
RL5_LYSTE	1.713e-28	55.05	60S ribosomal protein L5 OS=Lysiphlebus testaceipe...	[more]
RL5_NEUCR	9.400e-27	47.62	60S ribosomal protein L5 OS=Neurospora crassa GN=r...	[more]
RL5_STYCL	2.094e-26	52.29	60S ribosomal protein L5 OS=Styela clava GN=RPL5 P...	[more]

BLAST of Lens_culinaris_v1_Contig527 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q9AVH1_PEA	1.367e-60	95.83	Putative senescence-associated protein OS=Pisum sa...	[more]
B7FJX5_MEDTR	1.848e-57	88.33	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6TL04_SOYBN	6.573e-55	85.71	Putative uncharacterized protein OS=Glycine max PE...	[more]
A9PFA8_POPTR	1.979e-51	78.99	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9SFU0_RICCO	1.675e-50	79.83	Ribosomal protein L5, putative OS=Ricinus communis...	[more]
B9SEY9_RICCO	2.188e-50	77.31	Ribosomal protein L5, putative OS=Ricinus communis...	[more]
Q38HU5_SOLTU	3.732e-50	78.15	Putative uncharacterized protein OS=Solanum tubero...	[more]
D7T2H3_VITVI	3.732e-50	79.83	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9IAZ4_POPTR	6.366e-50	78.15	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PB43_POPTR	6.366e-50	78.15	Putative uncharacterized protein OS=Populus tricho...	[more]

BLAST of Lens_culinaris_v1_Contig527 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT3G25520.2	9.608e-49	76.47	\| Symbols: ATL5 \| ribosomal protein L5 \| chr3:9269...	[more]
AT3G25520.1	9.608e-49	76.47	\| Symbols: ATL5, PGY3, OLI5, RPL5A \| ribosomal pro...	[more]
AT5G39740.2	1.255e-48	75.63	\| Symbols: RPL5B \| ribosomal protein L5 B \| chr5:1...	[more]
AT5G39740.1	1.255e-48	75.63	\| Symbols: OLI7, RPL5B \| ribosomal protein L5 B \| ...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005485	Ribosomal protein L5, eukaryotic	PRINTS	PR00058	RIBOSOMALL5	coord: 4..23 score: 1.2e-11coord: 46..66 score: 1.2
IPR005485	Ribosomal protein L5, eukaryotic	PANTHER	PTHR23410	RIBOSOMAL PROTEIN L5-RELATED	coord: 8..136 score: 5.4
None	No IPR available	GENE3D	3.30.420.100	no description	coord: 8..91 score: 6.8
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 8..93 score: 2.1

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Lens_culinaris_v1_Contig527 ID=Lens_culinaris_v1_Contig527; Name=Lens_culinaris_v1_Contig527; organism=Lens culinaris; type=contig; length=743bp
CCGAGTCCCTTACCTCCCTTTCCACGGCCAGACATTTTCTCGAGATAATT
TAGAAACAGGTAATTTAGGGATCTAGGGTTTTTCGGAGGTTTGGATATTC
CTCACAGTGACAAAAGGTTTGCTGGTTTTGACAAGGAGAAAAAGGAGCTT
GATGCTGAGATTCACAGGAAGTATATCTTTGGTGGACATGTTACTGCATA
TATGAAGACATTGATTGAAGATGAACCTGAAAAATACCAAACTCACTTCA
GTCAATATATCAAGAAAGGGATAGAAGCTGATGGAATTGAGGAACTTTAC
AAGAAGGTTCATGCTGCTATTCGTGCAGATCCCTCAATCAAAAAGTCTGG
GAAGCAGCCACCTAAAGAACACAAGAGGTACAACCTGAAGAAGCTCACTT
ATGACGAGAGAAGGACAAAGTTGATTGCTCGTTTGGAGGCACTAAATTCT
GCAGTGGATGAAGATGAGGATGACGATGAGTGAATTTGAGTTGTTTGAGT
TGGGAGAGAAGTCAATTGTTAACTTAAGTGTTCATTTTCATTTCCTTAAA
ATTTTTGTTGCTTGTACCTTTTATTTTAGATCAACATTTTTGGGTAATTT
TTATTATCCTAGTTTGACTTGTTTCAATTTACATGAGATGTTTCCCAAAA
ATAATTTCTTGTCGTTGGATCAACTTAAGTTATCATGATAGTTTTGGTGG
GACGAATTTTATTAGAGATGAAAAATTATATCAAGATTTTGTC

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0008097	5S rRNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR005485	Rbsml_L5_euk/L18_arc

Search form

Lens_culinaris_v1_Contig527