Lens_culinaris_v1_Contig599

Contig Overview


Name	Lens_culinaris_v1_Contig599
Unique Name	Lens_culinaris_v1_Contig599
Type	contig
Organism	Lens culinaris (lentil)
Sequence length	1270

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	contig

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GT623146	GT623146	Lens culinaris	EST
GT623216	GT623216	Lens culinaris	EST
GT619504	GT619504	Lens culinaris	EST
GT623215	GT623215	Lens culinaris	EST
GT627116	GT627116	Lens culinaris	EST
GT625437	GT625437	Lens culinaris	EST
GT625525	GT625525	Lens culinaris	EST
GT619685	GT619685	Lens culinaris	EST
GT624778	GT624778	Lens culinaris	EST
GT619482	GT619482	Lens culinaris	EST

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
GT623146	EST	GT623146:1..775 +
GT623216	EST	GT623216:666..1181 +
GT619504	EST	GT619504:673..1145 +
GT623215	EST	GT623215:666..1181 +
GT627116	EST	GT627116:660..1180 +
GT625437	EST	GT625437:649..1254 +
GT625525	EST	GT625525:666..1252 +
GT619685	EST	GT619685:659..1254 +
GT624778	EST	GT624778:649..1259 +
GT619482	EST	GT619482:735..1270 +

Homology

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. SwissProt
Match: SNAK2_SOLTU (Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 5.870e-29
Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = 2

Query:  767 QKIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            +KIDC G+C ARCRLSSRPRLC+RACGTCC +CNCVPPGT+GN E CPCYASLTTHG KRKCP
Sbjct:   42 KKIDCGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. SwissProt
Match: GASA1_ARATH (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 1.708e-28
Identity = 51/73 (69.86%), Postives = 61/73 (83.56%), Query Frame = 2

Query:  737 KHAKTQGSLLQKIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            ++++ +    +KIDC  +CVARCRLS RPRLCHRACGTCC +CNCVPPGT GN +KC CYASLTTHGG+RKCP
Sbjct:   26 ENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. SwissProt
Match: GASA3_ARATH (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.829e-22
Identity = 44/67 (65.67%), Postives = 49/67 (73.13%), Query Frame = 2

Query:  755 GSLLQKIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            G  + KIDC G C  RC  SSRP LC RAC +CC +CNCVPPGTAGN   CPCYAS+TT GG+ KCP
Sbjct:   33 GEGVVKIDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. SwissProt
Match: GASA2_ARATH (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.074e-22
Identity = 43/67 (64.18%), Postives = 50/67 (74.63%), Query Frame = 2

Query:  755 GSLLQKIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            G  + KIDC G C  RC  SSR +LC RAC +CC +CNCVPPGT+GN   CPCYAS+TTHGG+ KCP
Sbjct:   33 GEGVVKIDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. SwissProt
Match: SNAK1_SOLTU (Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.208e-11
Identity = 26/59 (44.07%), Postives = 32/59 (54.24%), Query Frame = 2

Query:  779 CNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            C+  C  RC  +     C + CG CC +C CVP GT GN+ +CPCY       GK KCP
Sbjct:   30 CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. SwissProt
Match: RSI1_SOLLC (Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.414e-11
Identity = 28/64 (43.75%), Postives = 34/64 (53.12%), Query Frame = 2

Query:  764 LQKIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            L+  DC   C  RC  +S  + C   C  CC  C CVP G  GN++ CPCY +  T  GK KCP
Sbjct:   33 LRPTDCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. SwissProt
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.606e-10
Identity = 28/60 (46.67%), Postives = 33/60 (55.00%), Query Frame = 2

Query:  776 DCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            DC   C  RC  +S  + C   C  CC KC CVP GT GN++ CPCY +  T  G  KCP
Sbjct:   53 DCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. SwissProt
Match: GASA4_ARATH (Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.097e-10
Identity = 27/64 (42.19%), Postives = 35/64 (54.69%), Query Frame = 2

Query:  764 LQKIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            L++  C   C  RC+ +   + C   C  CCRKC CVPPG  GN++ C CY +  T  G  KCP
Sbjct:   43 LKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TrEMBL
Match: B7FLS1_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 4.154e-39
Identity = 81/86 (94.19%), Postives = 83/86 (96.51%), Query Frame = -2

Query:  391 ASVLPKLVANLHAMKAKYLKAPQPVSPNTQGKKWDFSFTSIWNTVVWLMLMNFFIKIVNSTAQTHLKKQQESELAALTKKSDSDTQ 648
            ASVLPKL ANLHAMK KYLKAP PVSPNT+GKKWDFSFTSIWNTVVWLMLMNFFIKIVNSTAQTHLKKQQESE+AALTKKSDSDTQ
Sbjct:  332 ASVLPKLTANLHAMKDKYLKAPHPVSPNTKGKKWDFSFTSIWNTVVWLMLMNFFIKIVNSTAQTHLKKQQESEVAALTKKSDSDTQ 417

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TrEMBL
Match: C6SWR9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 6.632e-37
Identity = 68/76 (89.47%), Postives = 71/76 (93.42%), Query Frame = 2

Query:  728 DQSKHAKTQGSLLQKIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            DQS H +TQGSLLQKIDCNG+C ARCRLSSRPRLC RACGTCCR+CNCVPPGTAGNQE CPCYASLTTHGGKRKCP
Sbjct:   24 DQSAHVQTQGSLLQKIDCNGACAARCRLSSRPRLCKRACGTCCRRCNCVPPGTAGNQEVCPCYASLTTHGGKRKCP 99

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TrEMBL
Match: C6T0H8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 3.291e-36
Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 2

Query:  728 DQSKHAKTQGSLLQKIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            DQS HA+T GSLLQ+IDCNG+C ARCRLSSRPRLC RACGTCCR+CNCVPPGTAGNQE CPCYASLTTHGGKRKCP
Sbjct:   24 DQSAHAQTLGSLLQQIDCNGACAARCRLSSRPRLCQRACGTCCRRCNCVPPGTAGNQEVCPCYASLTTHGGKRKCP 99

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TrEMBL
Match: C6TBK8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 2.608e-33
Identity = 60/76 (78.95%), Postives = 70/76 (92.11%), Query Frame = 2

Query:  728 DQSKHAKTQGSLLQKIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            DQS +A+TQGSL+Q+IDCN +C ARCRL+SR R+CHRACGTCCR+CNCVPPGT+GNQE CPCYASL THGG+RKCP
Sbjct:   25 DQSAYAQTQGSLVQQIDCNAACAARCRLASRQRMCHRACGTCCRRCNCVPPGTSGNQEVCPCYASLRTHGGRRKCP 100

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TrEMBL
Match: B7FMS2_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.897e-29
Identity = 65/104 (62.50%), Postives = 77/104 (74.04%), Query Frame = 2

Query:  728 DQSKHAKTQGSLLQKIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP*KNKNYLKW-NLDTE-SFILNIQKGTMH 1033
            DQS +A+TQGSLLQ+IDC+G+CVARCRLSSRP LC RACGTCCR+CNCVPPGT+GN+EKCPCYA L            N +   W NLD + S+ +NI   TMH
Sbjct:   26 DQSAYAQTQGSLLQQIDCDGACVARCRLSSRPNLCQRACGTCCRRCNCVPPGTSGNKEKCPCYARLPVVA--------NPSAPNWRNLDHKYSYEINIHTVTMH 121

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TrEMBL
Match: O49134_FRAAN (GAST-like gene product OS=Fragaria ananassa PE=4 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 9.599e-28
Identity = 53/66 (80.30%), Postives = 59/66 (89.39%), Query Frame = 2

Query:  758 SLLQKIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            SLL KIDC G+C ARCRLSSRP LC RACGTCC++C+CVPPGTAGN + CPCYA+LTTHGGKRKCP
Sbjct:   26 SLLAKIDCGGACKARCRLSSRPHLCKRACGTCCQRCSCVPPGTAGNYDVCPCYATLTTHGGKRKCP 91

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TrEMBL
Match: Q8L8X0_ARATH (GAST1-like protein OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 3.648e-27
Identity = 51/73 (69.86%), Postives = 61/73 (83.56%), Query Frame = 2

Query:  737 KHAKTQGSLLQKIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            ++++ +    +KIDC  +CVARCRLS RPRLCHRACGTCC +CNCVPPGT GN +KC CYASLTTHGG+RKCP
Sbjct:   26 ENSQKKNGYAKKIDCXSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TrEMBL
Match: Q8L7E2_ARATH (Expressed protein OS=Arabidopsis thaliana GN=At1g75750 PE=4 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 3.648e-27
Identity = 51/73 (69.86%), Postives = 60/73 (82.19%), Query Frame = 2

Query:  737 KHAKTQGSLLQKIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            ++++ +    +KIDC   CVARCRLS RPRLCHRACGTCC +CNCVPPGT GN +KC CYASLTTHGG+RKCP
Sbjct:   26 ENSQKKNGYAKKIDCGSGCVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TrEMBL
Match: D7KT64_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_895447 PE=4 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.222e-27
Identity = 51/76 (67.11%), Postives = 62/76 (81.58%), Query Frame = 2

Query:  728 DQSKHAKTQGSLLQKIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            D  ++++ +    +KIDC  +CVARCRLS RPRLCHRACGTCC +CNCVPPGT GN +KC CYA+LTTHGG+RKCP
Sbjct:   24 DVFENSQKKKGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYATLTTHGGRRKCP 99

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TrEMBL
Match: C6TG23_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.222e-27
Identity = 63/90 (70.00%), Postives = 76/90 (84.44%), Query Frame = -2

Query:  391 ASVLPKLVANLHAMKAKYLKAPQ-PVSPNTQGKKWDFSFTSIWNTVVWLMLMNFFIKIVNSTAQTHLKKQQESELAALTKKS---DSDTQ 648
            ASVLP++ ++L AMK KYLK    PVSPN QG+KWDFSFT +WNTVVWLMLMNFF+KIVN+TAQ +LKKQQE++L+ALT+KS   DSD Q
Sbjct:  336 ASVLPRVTSSLRAMKDKYLKKDSHPVSPNKQGEKWDFSFTLVWNTVVWLMLMNFFVKIVNATAQRYLKKQQETQLSALTEKSTPTDSDAQ 425

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TAIR peptide
Match: AT1G75750.2 (| Symbols: GASA1 | GAST1 protein homolog 1 | chr1:28441813-28442284 REVERSE LENGTH=97)

HSP 1 Score: 127.487 bits (319), Expect = 1.616e-29
Identity = 51/73 (69.86%), Postives = 61/73 (83.56%), Query Frame = 2

Query:  737 KHAKTQGSLLQKIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            ++++ +    +KIDC  +CVARCRLS RPRLCHRACGTCC +CNCVPPGT GN +KC CYASLTTHGG+RKCP
Sbjct:   25 ENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 97

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TAIR peptide
Match: AT1G75750.1 (| Symbols: GASA1 | GAST1 protein homolog 1 | chr1:28441813-28442284 REVERSE LENGTH=98)

HSP 1 Score: 127.487 bits (319), Expect = 1.616e-29
Identity = 51/73 (69.86%), Postives = 61/73 (83.56%), Query Frame = 2

Query:  737 KHAKTQGSLLQKIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            ++++ +    +KIDC  +CVARCRLS RPRLCHRACGTCC +CNCVPPGT GN +KC CYASLTTHGG+RKCP
Sbjct:   26 ENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TAIR peptide
Match: AT2G18420.1 (| Symbols: | Gibberellin-regulated family protein | chr2:7993861-7994334 FORWARD LENGTH=94)

HSP 1 Score: 121.324 bits (303), Expect = 1.158e-27
Identity = 48/62 (77.42%), Postives = 52/62 (83.87%), Query Frame = 2

Query:  770 KIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            KIDCN  C  RC LSSRP LCHRACGTCC +CNCV PGT+GN +KCPCY SLTTHGG+RKCP
Sbjct:   33 KIDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TAIR peptide
Match: AT4G14950.1 (| Symbols: | SNARE associated Golgi protein family | chr4:8545517-8547722 FORWARD LENGTH=416)

HSP 1 Score: 113.235 bits (282), Expect = 3.154e-25
Identity = 52/78 (66.67%), Postives = 62/78 (79.49%), Query Frame = -2

Query:  415 ASVLPKLVANLHAMKAKYLKAPQPVSPNTQGKKWDFSFTSIWNTVVWLMLMNFFIKIVNSTAQTHLKKQQESELAALT 648
            AS+LP L A LHAMK KY+ AP PV  + + KKWDFSF SIWN +VWLML+NFF+KIV +TAQ HLKK+QE E+A LT
Sbjct:  336 ASMLPGLTAKLHAMKEKYIDAPSPVPSHIKVKKWDFSFASIWNGIVWLMLLNFFVKIVTATAQRHLKKKQEKEMATLT 413

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TAIR peptide
Match: AT4G14950.3 (| Symbols: | SNARE associated Golgi protein family | chr4:8545551-8547722 FORWARD LENGTH=406)

HSP 1 Score: 113.235 bits (282), Expect = 3.154e-25
Identity = 52/78 (66.67%), Postives = 62/78 (79.49%), Query Frame = -2

Query:  415 ASVLPKLVANLHAMKAKYLKAPQPVSPNTQGKKWDFSFTSIWNTVVWLMLMNFFIKIVNSTAQTHLKKQQESELAALT 648
            AS+LP L A LHAMK KY+ AP PV  + + KKWDFSF SIWN +VWLML+NFF+KIV +TAQ HLKK+QE E+A LT
Sbjct:  326 ASMLPGLTAKLHAMKEKYIDAPSPVPSHIKVKKWDFSFASIWNGIVWLMLLNFFVKIVTATAQRHLKKKQEKEMATLT 403

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TAIR peptide
Match: AT4G09600.1 (| Symbols: GASA3 | GAST1 protein homolog 3 | chr4:6073014-6073516 REVERSE LENGTH=99)

HSP 1 Score: 107.457 bits (267), Expect = 1.731e-23
Identity = 44/67 (65.67%), Postives = 49/67 (73.13%), Query Frame = 2

Query:  755 GSLLQKIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            G  + KIDC G C  RC  SSRP LC RAC +CC +CNCVPPGTAGN   CPCYAS+TT GG+ KCP
Sbjct:   33 GEGVVKIDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TAIR peptide
Match: AT4G09610.1 (| Symbols: GASA2 | GAST1 protein homolog 2 | chr4:6074927-6075573 REVERSE LENGTH=99)

HSP 1 Score: 106.301 bits (264), Expect = 3.856e-23
Identity = 43/67 (64.18%), Postives = 50/67 (74.63%), Query Frame = 2

Query:  755 GSLLQKIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            G  + KIDC G C  RC  SSR +LC RAC +CC +CNCVPPGT+GN   CPCYAS+TTHGG+ KCP
Sbjct:   33 GEGVVKIDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TAIR peptide
Match: AT1G05360.1 (| Symbols: | BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT4G14950.1); Has 332 Blast hits to 326 proteins in 115 species: Archae - 0; Bacteria - 11; Metazoa - 174; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). | chr1:1564816-1567278 FORWARD LENGTH=416)

HSP 1 Score: 104.375 bits (259), Expect = 1.465e-22
Identity = 53/81 (65.43%), Postives = 59/81 (72.84%), Query Frame = -2

Query:  406 ASVLPKLVANLHAMKAKYLKAPQPVSPNTQGKKWDFSFTSIWNTVVWLMLMNFFIKIVNSTAQTHLKKQQESELAALTKKS 648
            AS LP+L A L  MK KYL A  PVS +   KKWD SF S+WN VVWLML+NFF +IV STAQ +LKKQQE EL ALT KS
Sbjct:  328 ASALPELTAKLRLMKEKYLIASPPVSSDINVKKWDLSFASVWNGVVWLMLLNFFGQIVTSTAQRYLKKQQEEELDALTNKS 408

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TAIR peptide
Match: AT1G22690.3 (| Symbols: | Gibberellin-regulated family protein | chr1:8027328-8027961 FORWARD LENGTH=119)

HSP 1 Score: 101.679 bits (252), Expect = 9.497e-22
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 2

Query:  770 KIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            +I+C  +C  RC  +SR ++CHRACG+CC KC CVPPGT+GN   CPCYAS+ THG K KCP
Sbjct:   58 RINCGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Lens_culinaris_v1_Contig599 vs. TAIR peptide
Match: AT1G22690.2 (| Symbols: | Gibberellin-regulated family protein | chr1:8027328-8027961 FORWARD LENGTH=119)

HSP 1 Score: 101.679 bits (252), Expect = 9.497e-22
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 2

Query:  770 KIDCNGSCVARCRLSSRPRLCHRACGTCCRKCNCVPPGTAGNQEKCPCYASLTTHGGKRKCP 955
            +I+C  +C  RC  +SR ++CHRACG+CC KC CVPPGT+GN   CPCYAS+ THG K KCP
Sbjct:   58 RINCGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

The following BLAST results are available for this feature:

BLAST of Lens_culinaris_v1_Contig599 vs. SwissProt
BLAST of Lens_culinaris_v1_Contig599 vs. TrEMBL
BLAST of Lens_culinaris_v1_Contig599 vs. TAIR peptide

BLAST of Lens_culinaris_v1_Contig599 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 8


Match Name	E-value	Identity	Description
SNAK2_SOLTU	5.870e-29	82.54	Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1	[more]
GASA1_ARATH	1.708e-28	69.86	Gibberellin-regulated protein 1 OS=Arabidopsis tha...	[more]
GASA3_ARATH	1.829e-22	65.67	Gibberellin-regulated protein 3 OS=Arabidopsis tha...	[more]
GASA2_ARATH	4.074e-22	64.18	Gibberellin-regulated protein 2 OS=Arabidopsis tha...	[more]
SNAK1_SOLTU	7.208e-11	44.07	Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1	[more]
RSI1_SOLLC	9.414e-11	43.75	Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=...	[more]
GAST1_SOLLC	1.606e-10	46.67	Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=...	[more]
GASA4_ARATH	2.097e-10	42.19	Gibberellin-regulated protein 4 OS=Arabidopsis tha...	[more]

BLAST of Lens_culinaris_v1_Contig599 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FLS1_MEDTR	4.154e-39	94.19	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6SWR9_SOYBN	6.632e-37	89.47	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6T0H8_SOYBN	3.291e-36	88.16	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TBK8_SOYBN	2.608e-33	78.95	Putative uncharacterized protein OS=Glycine max PE...	[more]
B7FMS2_MEDTR	3.897e-29	62.50	Putative uncharacterized protein OS=Medicago trunc...	[more]
O49134_FRAAN	9.599e-28	80.30	GAST-like gene product OS=Fragaria ananassa PE=4 S...	[more]
Q8L8X0_ARATH	3.648e-27	69.86	GAST1-like protein OS=Arabidopsis thaliana PE=4 SV...	[more]
Q8L7E2_ARATH	3.648e-27	69.86	Expressed protein OS=Arabidopsis thaliana GN=At1g7...	[more]
D7KT64_ARALY	6.222e-27	67.11	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
C6TG23_SOYBN	6.222e-27	70.00	Putative uncharacterized protein OS=Glycine max PE...	[more]

BLAST of Lens_culinaris_v1_Contig599 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT1G75750.2	1.616e-29	69.86	\| Symbols: GASA1 \| GAST1 protein homolog 1 \| chr1:...	[more]
AT1G75750.1	1.616e-29	69.86	\| Symbols: GASA1 \| GAST1 protein homolog 1 \| chr1:...	[more]
AT2G18420.1	1.158e-27	77.42	\| Symbols: \| Gibberellin-regulated family protein...	[more]
AT4G14950.1	3.154e-25	66.67	\| Symbols: \| SNARE associated Golgi protein famil...	[more]
AT4G14950.3	3.154e-25	66.67	\| Symbols: \| SNARE associated Golgi protein famil...	[more]
AT4G09600.1	1.731e-23	65.67	\| Symbols: GASA3 \| GAST1 protein homolog 3 \| chr4:...	[more]
AT4G09610.1	3.856e-23	64.18	\| Symbols: GASA2 \| GAST1 protein homolog 2 \| chr4:...	[more]
AT1G05360.1	1.465e-22	65.43	\| Symbols: \| BEST Arabidopsis thaliana protein ma...	[more]
AT1G22690.3	9.497e-22	61.29	\| Symbols: \| Gibberellin-regulated family protein...	[more]
AT1G22690.2	9.497e-22	61.29	\| Symbols: \| Gibberellin-regulated family protein...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 31..124 score: 1.3
None	No IPR available	SEG	seg	seg	coord: 26..48 score
None	No IPR available	SEG	seg	seg	coord: 44..55 score
None	No IPR available	SEG	seg	seg	coord: 1..20 score
None	No IPR available	SEG	seg	seg	coord: 2..13 score
None	No IPR available	SEG	seg	seg	coord: 34..45 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Lens_culinaris_v1_Contig599 ID=Lens_culinaris_v1_Contig599; Name=Lens_culinaris_v1_Contig599; organism=Lens culinaris; type=contig; length=1270bp
AAATCCATAAAAATTATATACATTGTGTCAAAATCACCAGACATGTTTTA
TATTTGATTTATAGCACTTGATAATTGATATACTTCTTGAAGTGATTTAA
CAGAAATAAAGGAACTAATAATAATTTTGGAATCAATGCCCATGATTCCA
AAATGTAACAGTAGCTAATATATTAAGAGGTTAAATTAATATCTATAATA
ATAAATCTAATATCCAAACAATGGTTGCCCCCAAGTTACACTTTTCAAAT
AAAACTGGAAACTTTTGTTACCAACTCTATATAGAAGAAGCAATAGCTTC
AAGTTTTGGAGTAACTTCCATGGAGGCGCTTCAGGAATAGCTTCAAATTT
CATCTTGCCAGAGGAACCGCAAAAATAATAACGCATTTCATTGTGTATCT
GAATCTGACTTTTTGGTTAATGCGGCTAGCTCACTCTCCTGCTGTTTCTT
CAGATGCGTCTGCGCGGTTGAATTCACTATCTTGATGAAGAAGTTCATGA
GCATGAGCCATACCACAGTATTCCAGATTGAAGTAAAAGAGAAATCCCAC
TTTTTCCCCTGAGTATTTGGAGAAACTGGTTGAGGTGCTTTCAGATACTT
AGCTTTCATTGCATGGAGATTAGCAACCAGTTTAGGCAAAACAGATGCCT
CAATCATGGCTTTCTCTAAGCTTCTAGCTGCTTCACTTCTTGCATCACTT
CTCCTTCTCCATCTTGTTGATGCAGCAGATCAATCGAAACATGCAAAAAC
ACAAGGTTCTCTTCTTCAAAAAATAGATTGTAATGGATCATGTGTTGCAA
GGTGCCGTTTATCATCTCGACCAAGATTGTGTCACAGAGCATGTGGGACT
TGTTGCAGAAAATGTAACTGCGTGCCACCTGGCACTGCTGGTAACCAAGA
AAAGTGTCCTTGTTATGCCAGCTTGACAACTCATGGTGGCAAACGCAAGT
GCCCTTAAAAAAACAAAAACTACCTTAAATGGAATTTGGACACAGAATCT
TTTATCTTAAATATCCAAAAGGGTACCATGCATTAGTAATAAAAATATAA
GTATTCCTTAGTCACTGTGGTCTGATGAACTACATGAAAAATATATAAAA
TCTGTACGTTTTCAATACCTGTTGGTTTTTTATAGAGTGTTGGTTCAAAA
AGTTAATAATCTTATTTCATGTATCGTTTTCAATTCTTGTCTGTTGTATT
CACTTCTTTTGTACTACTACCTATCATTTGTATTAATGAGAATTTCTTGT
GGGATACTGTAAATTTGAGA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR003854	GASA

Search form

Lens_culinaris_v1_Contig599