Lens_culinaris_v1_Contig617

Contig Overview


Name	Lens_culinaris_v1_Contig617
Unique Name	Lens_culinaris_v1_Contig617
Type	contig
Organism	Lens culinaris (lentil)
Sequence length	661

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	contig

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GT622967	GT622967	Lens culinaris	EST
GT625825	GT625825	Lens culinaris	EST
GT627790	GT627790	Lens culinaris	EST

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
KEGG analysis for Lens culinaris unigene v1	2011-01-05
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
GT622967	EST	GT622967:1..581 +
GT625825	EST	GT625825:138..618 +
GT627790	EST	GT627790:11..661 +

Homology

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. SwissProt
Match: RL27_PEA (60S ribosomal protein L27 OS=Pisum sativum GN=RPL27 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.821e-52
Identity = 104/135 (77.04%), Postives = 106/135 (78.52%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            MVKFLKPNKAVI+LQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKK+P                RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTAL             GKNRWFFTKLRF
Sbjct:    1 MVKFLKPNKAVILLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. SwissProt
Match: RL273_ARATH (60S ribosomal protein L27-3 OS=Arabidopsis thaliana GN=RPL27C PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.055e-44
Identity = 89/135 (65.93%), Postives = 97/135 (71.85%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            MVKFLK NKAVI+LQGRYAGKKAVI+K+FDDG R++PYGHCLVAG+KKYP                RVK F+KLVNYQHLMPTRYTLDVDLK+    D LQSKDKKV AL             GKNRWFFTKLRF
Sbjct:    1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. SwissProt
Match: RL272_ARATH (60S ribosomal protein L27-2 OS=Arabidopsis thaliana GN=RPL27B PE=2 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.166e-43
Identity = 88/135 (65.19%), Postives = 97/135 (71.85%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            MVKFLK NKAVI+LQGRYAGKKAVI+K+FDDGT ++ YGHCLVAG+KKYP                RVK F+KLVNYQHLMPTRYTLDVDLK+    D L+SKDKKVTAL             GKNRWFFTKLRF
Sbjct:    1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. SwissProt
Match: RL271_ARATH (60S ribosomal protein L27-1 OS=Arabidopsis thaliana GN=RPL27A PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.431e-41
Identity = 84/135 (62.22%), Postives = 94/135 (69.63%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            MVK +KP KAVI+LQGRY GKKAVIVK+FDDGT EK YGHCLVAG+KKYP                RVK F K++NYQH+MPTRYTLD+DLK+ V  D + SKDKKVTAL             GKNRWFFTKLRF
Sbjct:    1 MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. SwissProt
Match: RL27_SOLTU (60S ribosomal protein L27 OS=Solanum tuberosum GN=RPL27 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.989e-40
Identity = 85/139 (61.15%), Postives = 97/139 (69.78%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVV----PDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            M KFLKPNKAVI+LQG+YAG+KAVIV+ FD+GTR++PYGHCLVAGI +YP                RVKAF+KLVNY H+MPTRYTLD DLKD V      DVLQ++DKKVTA              GKNRWFFTKLRF
Sbjct:    1 MEKFLKPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISRYPKKVIRKDSAKKAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVTA-RRTKARLAERFKTGKNRWFFTKLRF 138

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. SwissProt
Match: RL27_PYRST (60S ribosomal protein L27 OS=Pyrobotrys stellata GN=RPL27 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.979e-31
Identity = 70/135 (51.85%), Postives = 81/135 (60.00%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            MVKFLK  K V+VL GR+AGKKAVIV+ FDDGT  +PYGH LV G++K P                 +K F+K VNY HLMPTRYTLDVD K  V  +  ++  KKV A              GKNRWFFTKLRF
Sbjct:    1 MVKFLKSGKVVVVLSGRFAGKKAVIVRNFDDGTSSRPYGHALVVGLQKEPRKVTKRQSQKKQAKKSTLKTFIKTVNYNHLMPTRYTLDVDFK-GVAAEAQENPTKKVEARKECKKLLEEKFKTGKNRWFFTKLRF 134

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. SwissProt
Match: RL27_HIPCM (60S ribosomal protein L27 OS=Hippocampus comes GN=rpl27 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.060e-28
Identity = 66/136 (48.53%), Postives = 80/136 (58.82%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVV-PDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            M KF+KP K V+VL GRYAG+KAVIVK  DDGT ++PY H LVAGI +YP                ++KAFVK+ NY HLMPTRY++D+ L   VV  DV +    K  A              GKN+WFF KLRF
Sbjct:    1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTAPMGKKKIAKRSKIKAFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKSKARREAKVKFEERYKTGKNKWFFQKLRF 136

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. SwissProt
Match: RL27_DANRE (60S ribosomal protein L27 OS=Danio rerio GN=rpl27 PE=2 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 1.384e-28
Identity = 66/136 (48.53%), Postives = 80/136 (58.82%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVV-PDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            M KF+KP K V+VL GRYAG+KAVIVK  DDGT ++PY H LVAGI +YP                ++KAFVK+ NY HLMPTRY++D+ L   VV  DV +    K  A              GKN+WFF KLRF
Sbjct:    1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTATMGKKKIAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. SwissProt
Match: RL27_ICTPU (60S ribosomal protein L27 OS=Ictalurus punctatus GN=rpl27 PE=2 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 4.027e-28
Identity = 64/136 (47.06%), Postives = 80/136 (58.82%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVV-PDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            M KF+KP K V+VL GRYAG+KAVIVK  DDGT ++PY H LV+GI +YP                ++KAFVK+ NY HLMPTRY++D+ L   +V  DV +    K  A              GKN+WFF KLRF
Sbjct:    1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVSGIDRYPRKVTATMGKKKVAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTIVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. SwissProt
Match: RL27_RAT (60S ribosomal protein L27 OS=Rattus norvegicus GN=Rpl27 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 5.259e-28
Identity = 64/136 (47.06%), Postives = 80/136 (58.82%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVV-PDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            M KF+KP K V+VL GRY+G+KAVIVK  DDGT ++PY H LVAGI +YP                ++K+FVK+ NY HLMPTRY++D+ L   VV  DV +    K  A              GKN+WFF KLRF
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. TrEMBL
Match: C6TMU7_SOYBN (60S ribosomal protein L27 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.217e-48
Identity = 100/135 (74.07%), Postives = 104/135 (77.04%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            MVKFLKPNKAVIVLQGRYAGKKAVIV+TFD+GTRE+PYGHCLVAGIKKYP                RVKAFVKLVNYQHLMPTRYTLDVDLKDAV PDVL +KDKKVTAL             GKNRWFFTKLRF
Sbjct:    1 MVKFLKPNKAVIVLQGRYAGKKAVIVRTFDEGTRERPYGHCLVAGIKKYPAKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVNPDVLNAKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. TrEMBL
Match: C6T3R4_SOYBN (60S ribosomal protein L27 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.589e-48
Identity = 99/135 (73.33%), Postives = 104/135 (77.04%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            MVKFLKPNKAVIVLQGRYAG+KAVIV+TFD+GTRE+PYGHCLVAGIKKYP                RVKAFVKLVNYQHLMPTRYTLDVDLKDAV PDVL +KDKKVTAL             GKNRWFFTKLRF
Sbjct:    1 MVKFLKPNKAVIVLQGRYAGRKAVIVRTFDEGTRERPYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVTPDVLATKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. TrEMBL
Match: B7FH51_MEDTR (60S ribosomal protein L27 OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.295e-47
Identity = 99/135 (73.33%), Postives = 101/135 (74.81%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            MVKFLKPNKAVIVLQGRYAGKKAVIVK FDDGTRE+ YGHCLVAGIKKYP                RVKAFVKLVNYQHLMPTRYTLDVDLK+ V  DVLQSKDKKVTAL             GKNRWFFTKLRF
Sbjct:    1 MVKFLKPNKAVIVLQGRYAGKKAVIVKNFDDGTRERAYGHCLVAGIKKYPAKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKEVVTTDVLQSKDKKVTALKEAKKRFEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. TrEMBL
Match: B7FN57_MEDTR (60S ribosomal protein L27 OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.487e-46
Identity = 97/135 (71.85%), Postives = 101/135 (74.81%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            MVKFLKPNKAVIVLQGRYAGKKAVIVK FDDGTR++ YGHCLVAGIKKYP                RV+AFVKLVNYQHLMPTRYTLDVDLK+ V  DVLQSKDKKVTAL             GKNRWFFTKLRF
Sbjct:    1 MVKFLKPNKAVIVLQGRYAGKKAVIVKNFDDGTRDRAYGHCLVAGIKKYPAKVIKKDSAKKTAKKSRVEAFVKLVNYQHLMPTRYTLDVDLKEVVTTDVLQSKDKKVTALKEAKKRFEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. TrEMBL
Match: A9PBR8_POPTR (60S ribosomal protein L27 OS=Populus trichocarpa GN=POPTRDRAFT_824991 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.805e-45
Identity = 93/135 (68.89%), Postives = 99/135 (73.33%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            MVKFLKPNKAVI+LQGRYAG+KAVIVK FDDGTR++PYGHCLVAGIKKYP                RVK F+KLVNYQHLMPTRYTLDVDLKDAV  D L +KDKKVTA              GKNRWFFTKLRF
Sbjct:    1 MVKFLKPNKAVIILQGRYAGRKAVIVKHFDDGTRDRPYGHCLVAGIKKYPSKVIKKDSTKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKDAVTADSLTTKDKKVTACKDTKARFEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. TrEMBL
Match: B9HD67_POPTR (60S ribosomal protein L27 OS=Populus trichocarpa GN=POPTRDRAFT_560241 PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.785e-45
Identity = 93/135 (68.89%), Postives = 98/135 (72.59%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            MVKFLKPNKAVIVLQGRYAG+KAVIVK FDDGTR++PYGHCLVAGIKKYP                RVK FVK+VNYQHLMPTRYTLDVDLKD V PD L +KDKKV A              GKNRWFFTKLRF
Sbjct:    1 MVKFLKPNKAVIVLQGRYAGRKAVIVKHFDDGTRDRPYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKCFVKVVNYQHLMPTRYTLDVDLKDLVTPDCLATKDKKVVACKETKTRFEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. TrEMBL
Match: A9PB88_POPTR (60S ribosomal protein L27 OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.066e-44
Identity = 92/135 (68.15%), Postives = 98/135 (72.59%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            MVKFL+PNKAVIVLQGRYAG+KAVIVK FDDGTR++PYGHCLVAGIKKYP                RVK FVK+VNYQHLMPTRYTLDVDLKD V PD L +KDKKV A              GKNRWFFTKLRF
Sbjct:    1 MVKFLRPNKAVIVLQGRYAGRKAVIVKHFDDGTRDRPYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKCFVKVVNYQHLMPTRYTLDVDLKDLVTPDCLATKDKKVVACKETKTRFGERFKTGKNRWFFTKLRF 135

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. TrEMBL
Match: A5C1Z2_VITVI (60S ribosomal protein L27 OS=Vitis vinifera GN=VITISV_032808 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.290e-44
Identity = 88/135 (65.19%), Postives = 101/135 (74.81%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            MVKFLKPNKAV++LQGR+AG+KAVIV++FDDGTR++PYGHCLVAGI KYP                RVKAF+KLVNY H+MPTRYTLDV+LKD V PDVLQS+DKKVTA              GKNRWFF+KLRF
Sbjct:    1 MVKFLKPNKAVVLLQGRFAGRKAVIVRSFDDGTRDRPYGHCLVAGIAKYPKKVIRKDSAKKTAKKSRVKAFIKLVNYNHIMPTRYTLDVNLKDVVSPDVLQSRDKKVTAAKETKKKLEERFKTGKNRWFFSKLRF 135

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. TrEMBL
Match: Q0WRB8_ARATH (60S ribosomal protein L27 OS=Arabidopsis thaliana GN=At4g15000 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.539e-43
Identity = 89/135 (65.93%), Postives = 97/135 (71.85%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            MVKFLK NKAVI+LQGRYAGKKAVI+K+FDDG R++PYGHCLVAG+KKYP                RVK F+KLVNYQHLMPTRYTLDVDLK+    D LQSKDKKV AL             GKNRWFFTKLRF
Sbjct:    1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. TrEMBL
Match: B9RI41_RICCO (60S ribosomal protein L27 OS=Ricinus communis GN=RCOM_1576060 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.010e-43
Identity = 88/135 (65.19%), Postives = 98/135 (72.59%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            MVKFLKPNKAVI+LQGRYAG+KAVIV++FDDGTR++PYGHCLVAGI KYP                RVKAF+K+VNY HLMPTRYTLDVDLKD   PD L +KDKKVTA              GKNRWFF+KLRF
Sbjct:    1 MVKFLKPNKAVILLQGRYAGRKAVIVRSFDDGTRDRPYGHCLVAGISKYPAKVIKKDSAKKTAKKSRVKAFMKVVNYSHLMPTRYTLDVDLKDVATPDALVTKDKKVTAAKEIKKRLEDRFKTGKNRWFFSKLRF 135

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. TAIR peptide
Match: AT4G15000.1 (| Symbols: | Ribosomal L27e protein family | chr4:8571896-8572303 FORWARD LENGTH=135)

HSP 1 Score: 179.874 bits (455), Expect = 1.088e-45
Identity = 89/135 (65.93%), Postives = 97/135 (71.85%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            MVKFLK NKAVI+LQGRYAGKKAVI+K+FDDG R++PYGHCLVAG+KKYP                RVK F+KLVNYQHLMPTRYTLDVDLK+    D LQSKDKKV AL             GKNRWFFTKLRF
Sbjct:    1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. TAIR peptide
Match: AT3G22230.1 (| Symbols: | Ribosomal L27e protein family | chr3:7844136-7844543 REVERSE LENGTH=135)

HSP 1 Score: 176.407 bits (446), Expect = 1.202e-44
Identity = 88/135 (65.19%), Postives = 97/135 (71.85%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            MVKFLK NKAVI+LQGRYAGKKAVI+K+FDDGT ++ YGHCLVAG+KKYP                RVK F+KLVNYQHLMPTRYTLDVDLK+    D L+SKDKKVTAL             GKNRWFFTKLRF
Sbjct:    1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of Lens_culinaris_v1_Contig617 vs. TAIR peptide
Match: AT2G32220.1 (| Symbols: | Ribosomal L27e protein family | chr2:13678945-13679352 FORWARD LENGTH=135)

HSP 1 Score: 168.703 bits (426), Expect = 2.507e-42
Identity = 84/135 (62.22%), Postives = 94/135 (69.63%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALXXXXXXXXXXXXXGKNRWFFTKLRF 435
            MVK +KP KAVI+LQGRY GKKAVIVK+FDDGT EK YGHCLVAG+KKYP                RVK F K++NYQH+MPTRYTLD+DLK+ V  D + SKDKKVTAL             GKNRWFFTKLRF
Sbjct:    1 MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEERFKTGKNRWFFTKLRF 135

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BLAST of Lens_culinaris_v1_Contig617 vs. TAIR peptide
Match: AT4G15000.2 (| Symbols: | Ribosomal L27e protein family | chr4:8571896-8572387 FORWARD LENGTH=131)

HSP 1 Score: 157.918 bits (398), Expect = 4.426e-39
Identity = 77/110 (70.00%), Postives = 85/110 (77.27%), Query Frame = 1

Query:   31 MVKFLKPNKAVIVLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKYPXXXXXXXXXXXXXXXXRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTAL 360
            MVKFLK NKAVI+LQGRYAGKKAVI+K+FDDG R++PYGHCLVAG+KKYP                RVK F+KLVNYQHLMPTRYTLDVDLK+    D LQSKDKKV AL
Sbjct:    1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAAL 110

The following BLAST results are available for this feature:

BLAST of Lens_culinaris_v1_Contig617 vs. SwissProt
BLAST of Lens_culinaris_v1_Contig617 vs. TrEMBL
BLAST of Lens_culinaris_v1_Contig617 vs. TAIR peptide

BLAST of Lens_culinaris_v1_Contig617 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL27_PEA	6.821e-52	77.04	60S ribosomal protein L27 OS=Pisum sativum GN=RPL2...	[more]
RL273_ARATH	1.055e-44	65.93	60S ribosomal protein L27-3 OS=Arabidopsis thalian...	[more]
RL272_ARATH	1.166e-43	65.19	60S ribosomal protein L27-2 OS=Arabidopsis thalian...	[more]
RL271_ARATH	2.431e-41	62.22	60S ribosomal protein L27-1 OS=Arabidopsis thalian...	[more]
RL27_SOLTU	5.989e-40	61.15	60S ribosomal protein L27 OS=Solanum tuberosum GN=...	[more]
RL27_PYRST	2.979e-31	51.85	60S ribosomal protein L27 OS=Pyrobotrys stellata G...	[more]
RL27_HIPCM	1.060e-28	48.53	60S ribosomal protein L27 OS=Hippocampus comes GN=...	[more]
RL27_DANRE	1.384e-28	48.53	60S ribosomal protein L27 OS=Danio rerio GN=rpl27 ...	[more]
RL27_ICTPU	4.027e-28	47.06	60S ribosomal protein L27 OS=Ictalurus punctatus G...	[more]
RL27_RAT	5.259e-28	47.06	60S ribosomal protein L27 OS=Rattus norvegicus GN=...	[more]

BLAST of Lens_culinaris_v1_Contig617 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TMU7_SOYBN	1.217e-48	74.07	60S ribosomal protein L27 OS=Glycine max PE=2 SV=1	[more]
C6T3R4_SOYBN	1.589e-48	73.33	60S ribosomal protein L27 OS=Glycine max PE=2 SV=1	[more]
B7FH51_MEDTR	2.295e-47	73.33	60S ribosomal protein L27 OS=Medicago truncatula P...	[more]
B7FN57_MEDTR	1.487e-46	71.85	60S ribosomal protein L27 OS=Medicago truncatula P...	[more]
A9PBR8_POPTR	2.805e-45	68.89	60S ribosomal protein L27 OS=Populus trichocarpa G...	[more]
B9HD67_POPTR	4.785e-45	68.89	60S ribosomal protein L27 OS=Populus trichocarpa G...	[more]
A9PB88_POPTR	1.066e-44	68.15	60S ribosomal protein L27 OS=Populus trichocarpa P...	[more]
A5C1Z2_VITVI	5.290e-44	65.19	60S ribosomal protein L27 OS=Vitis vinifera GN=VIT...	[more]
Q0WRB8_ARATH	1.539e-43	65.93	60S ribosomal protein L27 OS=Arabidopsis thaliana ...	[more]
B9RI41_RICCO	2.010e-43	65.19	60S ribosomal protein L27 OS=Ricinus communis GN=R...	[more]

BLAST of Lens_culinaris_v1_Contig617 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT4G15000.1	1.088e-45	65.93	\| Symbols: \| Ribosomal L27e protein family \| chr4...	[more]
AT3G22230.1	1.202e-44	65.19	\| Symbols: \| Ribosomal L27e protein family \| chr3...	[more]
AT2G32220.1	2.507e-42	62.22	\| Symbols: \| Ribosomal L27e protein family \| chr2...	[more]
AT4G15000.2	4.426e-39	70.00	\| Symbols: \| Ribosomal L27e protein family \| chr4...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001141	Ribosomal protein L27e	PANTHER	PTHR10497	60S RIBOSOMAL PROTEIN L27E	coord: 12..145 score: 4.9
IPR001141	Ribosomal protein L27e	PFAM	PF01777	Ribosomal_L27e	coord: 62..145 score: 1.5
IPR005824	KOW	PFAM	PF00467	KOW	coord: 17..42 score: 1.1
IPR005824	KOW	SMART	SM00739	no description	coord: 14..41 score: 0.
IPR014722	Translation protein SH3-like, subgroup	GENE3D	2.30.30.30	no description	coord: 13..117 score: 7.3
IPR018262	Ribosomal protein L27e, conserved site	PROSITE	PS01107	RIBOSOMAL_L27E	coord: 134..145 score
None	No IPR available	SEG	seg	seg	coord: 61..76 score: NAcoord: 121..133 score
None	No IPR available	SEG	seg	seg	coord: 36..47 score
None	No IPR available	SEG	seg	seg	coord: 25..42 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Lens_culinaris_v1_Contig617 ID=Lens_culinaris_v1_Contig617; Name=Lens_culinaris_v1_Contig617; organism=Lens culinaris; type=contig; length=661bp
TCTGAACCAGAGAAAGGCGTAGGGTTGAAAATGGTGAAGTTTTTGAAACC
TAACAAGGCGGTGATTGTCTTGCAAGGCCGATACGCCGGCAAGAAGGCCG
TGATCGTCAAGACCTTCGACGACGGAACCCGTGAGAAGCCTTACGGGCAT
TGTCTCGTTGCTGGAATCAAGAAGTACCCCAGCAAAGTTATCAAGAAAGA
CTCCGCGAAGAAGACGGCGAAGAAATCTAGGGTAAAGGCATTCGTGAAGC
TGGTGAATTATCAACACCTGATGCCAACTAGGTATACCCTGGATGTGGAT
CTGAAGGACGCCGTTGTTCCTGATGTTCTTCAATCAAAGGATAAGAAGGT
GACTGCATTGAAGGAGACCAAGAAGAGGTTTGAAGAGAGGTTCAAAACAG
GGAAGAACAGGTGGTTTTTCACTAAGCTTAGGTTTTGAATAGGTTTTGAA
TAGGTTTTGAATTTTTGCTGTTTTGTTTCTAGTTATGCATTTTGGTATTT
GATTATCATGAATAAGTTATGGATGAACTTGTTGTTTAGTTTTAATTATG
CAAGAGATTTTGTTTTTTCTGGATTTTGAATTATGATTATGAGTAGATTT
TTTAGTATTTTGATCGAAACAAAAATAAGTGTTATATATATTGAATAATC
TAATTTTACCT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR001141	Ribosomal_L27e
IPR005824	KOW
IPR014722	Rib_L2_dom2
IPR018262	Ribosomal_L27e_CS

Search form

Lens_culinaris_v1_Contig617