Lens_culinaris_v1_Contig815

Contig Overview
NameLens_culinaris_v1_Contig815
Unique NameLens_culinaris_v1_Contig815
Typecontig
OrganismLens culinaris (lentil)
Sequence length501
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GT622012GT622012Lens culinarisEST
GT620310GT620310Lens culinarisEST


Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GT622012ESTGT622012:1..461 +
GT620310ESTGT620310:80..501 +
Homology
[Close]
BLAST of Lens_culinaris_v1_Contig815 vs. SwissProt
Match: ATP5E_ARATH (ATP synthase subunit epsilon, mitochondrial OS=Arabidopsis thaliana GN=At1g51650 PE=1 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 1.090e-22
Identity = 46/57 (80.70%), Postives = 52/57 (91.23%), Query Frame = 1 
Query:  109 GMTYITYSNICANLVRNALKEPHKTEAIAREKVHFSLSKWVDGKPEKPTLRSDTPDL 279
            GMTYI+YSNICAN+VRN LKEPHK EA+ REKVHFSLSKW DGKP+KP LRSDTP++
Sbjct:   14 GMTYISYSNICANIVRNCLKEPHKAEALTREKVHFSLSKWADGKPQKPVLRSDTPEV 70
[Close]
BLAST of Lens_culinaris_v1_Contig815 vs. SwissProt
Match: ATP5E_IPOBA (ATP synthase subunit epsilon, mitochondrial OS=Ipomoea batatas PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.332e-20
Identity = 42/54 (77.78%), Postives = 50/54 (92.59%), Query Frame = 1 
Query:  109 GMTYITYSNICANLVRNALKEPHKTEAIAREKVHFSLSKWVDGKPEKPTLRSDT 270
            GMTYITYSN+CAN+VRN LKEP++ EA++REKVHFS SKWVDGKP+KP +RSDT
Sbjct:   14 GMTYITYSNLCANMVRNCLKEPYRAEALSREKVHFSFSKWVDGKPQKPAIRSDT 67
[Close]
BLAST of Lens_culinaris_v1_Contig815 vs. SwissProt
Match: ATP5E_MAIZE (ATP synthase subunit epsilon, mitochondrial OS=Zea mays PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.384e-19
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 1 
Query:  109 GMTYITYSNICANLVRNALKEPHKTEAIAREKVHFSLSKWVDGKPEKPTLRSDTPD 276
            GMTYI YSNICA LVRN LKEP K+EA +REKVHFS+SKW DGK EKPT+R+++ D
Sbjct:   15 GMTYIGYSNICAALVRNCLKEPFKSEAASREKVHFSISKWTDGKQEKPTVRTESDD 70

HSP 2 Score: 25.7942 bits (55), Expect = 1.384e-19
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3 
Query:   72 ASTGAVPFWRAA 107
            A+T AVPFWRAA
Sbjct:    3 ATTAAVPFWRAA 14
[Close]
BLAST of Lens_culinaris_v1_Contig815 vs. TrEMBL
Match: B9RU09_RICCO (ATP synthase epsilon chain, mitochondrial, putative OS=Ricinus communis GN=RCOM_1460050 PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.231e-23
Identity = 49/56 (87.50%), Postives = 54/56 (96.43%), Query Frame = 1 
Query:  109 GMTYITYSNICANLVRNALKEPHKTEAIAREKVHFSLSKWVDGKPEKPTLRSDTPD 276
            GMTYITYSNICANLVRN LKEPHKTEA+ REKVHFS+SKWVDGKP+KPT+RSDTP+
Sbjct:   14 GMTYITYSNICANLVRNCLKEPHKTEALTREKVHFSVSKWVDGKPQKPTMRSDTPE 69
[Close]
BLAST of Lens_culinaris_v1_Contig815 vs. TrEMBL
Match: C6GFP6_GOSHI (ATP synthase epsilon subunit 1 OS=Gossypium hirsutum PE=4 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.573e-22
Identity = 47/56 (83.93%), Postives = 54/56 (96.43%), Query Frame = 1 
Query:  109 GMTYITYSNICANLVRNALKEPHKTEAIAREKVHFSLSKWVDGKPEKPTLRSDTPD 276
            GMTYITYSNICANLVRN LKEP+KTEA++REKVHFS+SKW DGKPEKPT+RSD+P+
Sbjct:   14 GMTYITYSNICANLVRNCLKEPYKTEALSREKVHFSISKWTDGKPEKPTIRSDSPE 69
[Close]
BLAST of Lens_culinaris_v1_Contig815 vs. TrEMBL
Match: C6SVN9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.094e-22
Identity = 48/56 (85.71%), Postives = 53/56 (94.64%), Query Frame = 1 
Query:  109 GMTYITYSNICANLVRNALKEPHKTEAIAREKVHFSLSKWVDGKPEKPTLRSDTPD 276
            GMTYITYSNICANLVRN LKEP+K EAI+REKVHF+LSKWVD KPEKPT+RSDTP+
Sbjct:   14 GMTYITYSNICANLVRNCLKEPYKAEAISREKVHFALSKWVDAKPEKPTIRSDTPE 69
[Close]
BLAST of Lens_culinaris_v1_Contig815 vs. TrEMBL
Match: D7KHU4_ARALY (ATP synthase epsilon chain, mitochondrial OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_474279 PE=4 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.040e-21
Identity = 46/57 (80.70%), Postives = 52/57 (91.23%), Query Frame = 1 
Query:  109 GMTYITYSNICANLVRNALKEPHKTEAIAREKVHFSLSKWVDGKPEKPTLRSDTPDL 279
            GMTYI+YSNICAN+VRN LKEPHK EA+ REKVHFSLSKW DGKP+KP LRSDTP++
Sbjct:   14 GMTYISYSNICANIVRNCLKEPHKAEALTREKVHFSLSKWADGKPQKPVLRSDTPEI 70
[Close]
BLAST of Lens_culinaris_v1_Contig815 vs. TrEMBL
Match: Q8L5Q1_CICAR (Putative epsilon subunit of mitochondrial F1-ATPase OS=Cicer arietinum GN=f19c24.25" PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.738e-21
Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = 1 
Query:  109 GMTYITYSNICANLVRNALKEPHKTEAIAREKVHFSLSKWVDGKPEKPTLRSD 267
            GMTYITYSNICANLVRN LKEPHKTE ++REKVHFSLSKWVDGK +KPTLRSD
Sbjct:   14 GMTYITYSNICANLVRNCLKEPHKTEVLSREKVHFSLSKWVDGKAQKPTLRSD 66
[Close]
BLAST of Lens_culinaris_v1_Contig815 vs. TrEMBL
Match: C6SXM9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.560e-20
Identity = 44/56 (78.57%), Postives = 52/56 (92.86%), Query Frame = 1 
Query:  109 GMTYITYSNICANLVRNALKEPHKTEAIAREKVHFSLSKWVDGKPEKPTLRSDTPD 276
            GMTYITYSNICANL+RN LKEP+K E+++REK+HF LSKWVD KPEKPT+RSDTP+
Sbjct:   14 GMTYITYSNICANLLRNCLKEPYKAESLSREKLHFVLSKWVDAKPEKPTIRSDTPE 69
[Close]
BLAST of Lens_culinaris_v1_Contig815 vs. TrEMBL
Match: C6T434_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.831e-19
Identity = 47/63 (74.60%), Postives = 52/63 (82.54%), Query Frame = 1 
Query:  109 GMTYITYSNICANLVRNALKEPHKTEAIAREKVHFSLSKWVDGKPEKP-------TLRSDTPD 276
            GMTYITYSNICANLVRN LKEP+K EAI+REKVHF+LSKWVD KPEKP        +RSDTP+
Sbjct:   14 GMTYITYSNICANLVRNCLKEPYKAEAISREKVHFALSKWVDAKPEKPMIYILFSAIRSDTPE 76
[Close]
BLAST of Lens_culinaris_v1_Contig815 vs. TrEMBL
Match: Q8H2A3_ANACO (ATP synthase epsilon subunit OS=Ananas comosus PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.307e-19
Identity = 46/84 (54.76%), Postives = 59/84 (70.24%), Query Frame = 1 
Query:   22 LASASSFSTQGLIINLWRQPEQCRSGGQRGMTYITYSNICANLVRNALKEPHKTEAIAREKVHFSLSKWVDGKPEKPTLRSDTP 273
            +ASA++ +  G     WR           GMTYITYSNICA+L+R+ LKEP+K +A +REKVHF++SKW  GKPEKP +RSDTP
Sbjct:    1 MASAAAGAVAGAAAPFWRAA---------GMTYITYSNICASLLRSCLKEPYKADAASREKVHFAISKWAQGKPEKPVIRSDTP 75
[Close]
BLAST of Lens_culinaris_v1_Contig815 vs. TrEMBL
Match: B6T0Y2_MAIZE (ATP synthase epsilon chain, mitochondrial OS=Zea mays PE=4 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.734e-18
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 1 
Query:  109 GMTYITYSNICANLVRNALKEPHKTEAIAREKVHFSLSKWVDGKPEKPTLRSDTPD 276
            GMTYI YSNICA LVRN LKEP K+EA +REKVHFS+SKW DGK EKPT+R+++ D
Sbjct:   15 GMTYIGYSNICAALVRNCLKEPFKSEAASREKVHFSISKWTDGKQEKPTVRTESDD 70

HSP 2 Score: 25.7942 bits (55), Expect = 1.734e-18
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3 
Query:   72 ASTGAVPFWRAA 107
            A+T AVPFWRAA
Sbjct:    3 ATTAAVPFWRAA 14
[Close]
BLAST of Lens_culinaris_v1_Contig815 vs. TrEMBL
Match: Q0J6X7_ORYSJ (Os08g0250200 protein OS=Oryza sativa subsp. japonica GN=Os08g0250200 PE=4 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.818e-18
Identity = 39/53 (73.58%), Postives = 46/53 (86.79%), Query Frame = 1 
Query:  109 GMTYITYSNICANLVRNALKEPHKTEAIAREKVHFSLSKWVDGKPEKPTLRSD 267
            GMTYI YSN+CA LVR  LKEPHK+EA +REKVHF++SKW DGK EKPT+R+D
Sbjct:   15 GMTYIGYSNVCAALVRRCLKEPHKSEAASREKVHFAISKWADGKQEKPTVRTD 67

HSP 2 Score: 25.7942 bits (55), Expect = 3.818e-18
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3 
Query:   72 ASTGAVPFWRAA 107
            A+T AVPFWRAA
Sbjct:    3 ATTAAVPFWRAA 14
[Close]
BLAST of Lens_culinaris_v1_Contig815 vs. TAIR peptide
Match: AT1G51650.1 (| Symbols: | ATP synthase epsilon chain, mitochondrial | chr1:19152680-19153641 FORWARD LENGTH=70)

HSP 1 Score: 105.916 bits (263), Expect = 1.202e-23
Identity = 46/57 (80.70%), Postives = 52/57 (91.23%), Query Frame = 1 
Query:  109 GMTYITYSNICANLVRNALKEPHKTEAIAREKVHFSLSKWVDGKPEKPTLRSDTPDL 279
            GMTYI+YSNICAN+VRN LKEPHK EA+ REKVHFSLSKW DGKP+KP LRSDTP++
Sbjct:   14 GMTYISYSNICANIVRNCLKEPHKAEALTREKVHFSLSKWADGKPQKPVLRSDTPEV 70
The following BLAST results are available for this feature:
BLAST of Lens_culinaris_v1_Contig815 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
ATP5E_ARATH1.090e-2280.70ATP synthase subunit epsilon, mitochondrial OS=Ara... [more]
ATP5E_IPOBA1.332e-2077.78ATP synthase subunit epsilon, mitochondrial OS=Ipo... [more]
ATP5E_MAIZE1.384e-1973.21ATP synthase subunit epsilon, mitochondrial OS=Zea... [more]
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BLAST of Lens_culinaris_v1_Contig815 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9RU09_RICCO3.231e-2387.50ATP synthase epsilon chain, mitochondrial, putativ... [more]
C6GFP6_GOSHI3.573e-2283.93ATP synthase epsilon subunit 1 OS=Gossypium hirsut... [more]
C6SVN9_SOYBN6.094e-2285.71Putative uncharacterized protein OS=Glycine max PE... [more]
D7KHU4_ARALY1.040e-2180.70ATP synthase epsilon chain, mitochondrial OS=Arabi... [more]
Q8L5Q1_CICAR6.738e-2188.68Putative epsilon subunit of mitochondrial F1-ATPas... [more]
C6SXM9_SOYBN2.560e-2078.57Putative uncharacterized protein OS=Glycine max PE... [more]
C6T434_SOYBN2.831e-1974.60Putative uncharacterized protein OS=Glycine max PE... [more]
Q8H2A3_ANACO6.307e-1954.76ATP synthase epsilon subunit OS=Ananas comosus PE=... [more]
B6T0Y2_MAIZE1.734e-1873.21ATP synthase epsilon chain, mitochondrial OS=Zea m... [more]
Q0J6X7_ORYSJ3.818e-1873.58Os08g0250200 protein OS=Oryza sativa subsp. japoni... [more]
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BLAST of Lens_culinaris_v1_Contig815 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G51650.11.202e-2380.70| Symbols: | ATP synthase epsilon chain, mitochon... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006721ATPase, F1 complex, epsilon subunit, mitochondrialGENE3D1.10.1620.20no descriptioncoord: 36..79
score: 1.2
IPR006721ATPase, F1 complex, epsilon subunit, mitochondrialPFAMPF04627ATP-synt_Epscoord: 36..79
score: 3.4
IPR006721ATPase, F1 complex, epsilon subunit, mitochondrialSUPERFAMILY48690Epsilon subunit of mitochondrial F1F0-ATP synthasecoord: 30..76
score: 2.6
NoneNo IPR availablePANTHERPTHR12448ATP SYNTHASE EPSILON CHAIN, MITOCHONDRIALcoord: 37..93
score: 5.8

Sequences
The following sequences are available for this feature:

contig sequence

>Lens_culinaris_v1_Contig815 ID=Lens_culinaris_v1_Contig815; Name=Lens_culinaris_v1_Contig815; organism=Lens culinaris; type=contig; length=501bp
CTGAACCCTCGCCAACTAACCCTAGCTTCTGCCTCTTCATTTTCAACTCA
GGGTCTTATCATCAATCTATGGCGTCAACCGGAGCAGTGCCGTTCTGGAG
GGCAGCGTGGGATGACATACATAACTTACTCCAACATTTGCGCGAATCTT
GTCAGGAATGCCCTCAAGGAACCTCACAAGACTGAAGCTATCGCTCGTGA
GAAAGTCCATTTCTCTCTTTCGAAATGGGTTGACGGAAAACCCGAAAAAC
CTACTCTTCGTTCAGACACCCCAGATCTTTGAGTCGGAATGAGTGGAAGC
TATGCATGCAGAATTCATTGAGATCTGCTGGAAGTTAATTGACATTTTGA
ACCTTGTGGATTTTATGTTTTCTATTGTTGTTTTTTTCCCATGATGTATG
TAGCACATGCAACAAATTTTGGATTTGCATGGTTAATCTTGTAATAATTA
AAGTTTGAACACAACAAAGTTGGGTCACAAGTTTATGAAATAATTTACAT
G
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Biological Process
TermDefinition
GO:0015986proton motive force-driven ATP synthesis
Vocabulary: INTERPRO
TermDefinition
IPR006721ATP_synth_F1_esu_mt