Pisum_sativum_v1_Contig1479
Contig Overview
Unigenes
This contig is part of the following unigenes:
Relationships
The following EST feature(s) are a part of this contig:
Analyses
This contig is derived from or has results from the following analyses
Alignments
The following features are aligned
Homology
BLAST of Pisum_sativum_v1_Contig1479 vs. SwissProt
Match: UGPI7_ARATH (Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana GN=At4g28100 PE=1 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 2.618e-63 Identity = 117/158 (74.05%), Postives = 136/158 (86.08%), Query Frame = 3 Query: 525 QPLKPGEYPPSNTVPAFPVQTQAQICKLDLSNELFGGVKDACGKDLDRSRCCPVLAAWLFAAHARSALEVTADAPAPSSGEL--PMMPDDSQKCVNSLQDSILTRNIRIPQPNATCDAILCFCGIRLHQISSLSCPAAFNVSGSQKNATPTAAVRNLE 992 +P++P NTVPAFPV+TQAQ C+LDLSNELFGGV +ACG++LDRSRCCPVLAAWLFAAHARSAL++ A AP P S + PM PDDSQKCVN+LQ ++LT+ I+IPQPN++CDAILCFCGIRLHQISSLSCPAAFNVS KNATPTAAV+NLE Sbjct: 27 EPVQP------NTVPAFPVETQAQSCRLDLSNELFGGVNEACGRNLDRSRCCPVLAAWLFAAHARSALQLPAPAPTPESSDPDEPMKPDDSQKCVNTLQSALLTKQIKIPQPNSSCDAILCFCGIRLHQISSLSCPAAFNVSSGFKNATPTAAVKNLE 178
BLAST of Pisum_sativum_v1_Contig1479 vs. TrEMBL
Match: B9RW84_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1176610 PE=4 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 2.207e-71 Identity = 126/165 (76.36%), Postives = 147/165 (89.09%), Query Frame = 3 Query: 504 QPVTDPNQPLKPGEYPPSNTVPAFPVQTQAQICKLDLSNELFGGVKDACGKDLDRSRCCPVLAAWLFAAHARSALEVTADAPAPSSGELPMMPDDSQKCVNSLQDSILTRNIRIPQPNATCDAILCFCGIRLHQISSLSCPAAFNVSGSQKNATPTAAVRNLENN 998 +PV+ NQPLKPG+Y NTVPAFPVQT++Q+C+LDLS ELFGGV DACG++LDRSRCCPVLAAWLFAAHAR AL+V+A APA + +LPMMPDDSQKCVNSLQ ++L+RN++IPQPNA+CDAILCFCGIRLHQI+SLSCPAAFNVS NATPTAAV+NLE N Sbjct: 24 EPVSGSNQPLKPGDYSSPNTVPAFPVQTESQVCRLDLSAELFGGVNDACGRELDRSRCCPVLAAWLFAAHARYALQVSASAPASAEEDLPMMPDDSQKCVNSLQSALLSRNVKIPQPNASCDAILCFCGIRLHQITSLSCPAAFNVSSGFHNATPTAAVKNLEKN 188
BLAST of Pisum_sativum_v1_Contig1479 vs. TrEMBL
Match: A9PHL6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1108791 PE=2 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 1.582e-69 Identity = 127/165 (76.97%), Postives = 146/165 (88.48%), Query Frame = 3 Query: 504 QPVTDPNQPLKPGEYPPSNTVPAFPVQTQAQICKLDLSNELFGGVKDACGKDLDRSRCCPVLAAWLFAAHARSALEVTADAPAPSSGELPMMPDDSQKCVNSLQDSILTRNIRIPQPNATCDAILCFCGIRLHQISSLSCPAAFNVSGSQKNATPTAAVRNLENN 998 +PV+ NQPLKPG+Y NTVPAFPVQT++QIC LDLS ELFGGV DACG+DLDRSRCCPVLAAWLFAAHARSAL+V A AP S+ +LPMMPDDSQKCVNSLQ ++L++N+++ QPNA+CDAILCFCGIRLHQISSLSCPAAFNVS + NATPTAAV+NLE N Sbjct: 24 EPVSGQNQPLKPGDYSNPNTVPAFPVQTESQICHLDLSAELFGGVNDACGRDLDRSRCCPVLAAWLFAAHARSALQVQAPAPT-SAPDLPMMPDDSQKCVNSLQSALLSKNVKLAQPNASCDAILCFCGIRLHQISSLSCPAAFNVSSAFHNATPTAAVKNLEKN 187
BLAST of Pisum_sativum_v1_Contig1479 vs. TrEMBL
Match: B9I6H4_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_729171 PE=4 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 4.602e-69 Identity = 126/165 (76.36%), Postives = 142/165 (86.06%), Query Frame = 3 Query: 504 QPVTDPNQPLKPGEYPPSNTVPAFPVQTQAQICKLDLSNELFGGVKDACGKDLDRSRCCPVLAAWLFAAHARSALEVTADAPAPSSGELPMMPDDSQKCVNSLQDSILTRNIRIPQPNATCDAILCFCGIRLHQISSLSCPAAFNVSGSQKNATPTAAVRNLENN 998 +PV+ NQPLKPG+Y NTVPA PVQT++QIC LDLS ELFGGV DACG+DLDRSRCCPVLAAWLFAAHARSAL+V A AP PS + PMMPDDSQKCVNSLQ ++L++N+++PQPNA+CDAILCFCGIRLH ISSLSCPAAFNVS NATPTAAV NLE N Sbjct: 24 EPVSGQNQPLKPGDYSNPNTVPAIPVQTESQICHLDLSAELFGGVNDACGRDLDRSRCCPVLAAWLFAAHARSALQVHASAPTPSP-DFPMMPDDSQKCVNSLQSALLSKNVKLPQPNASCDAILCFCGIRLHHISSLSCPAAFNVSSGFHNATPTAAVTNLEKN 187
BLAST of Pisum_sativum_v1_Contig1479 vs. TrEMBL
Match: D7SQS7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_134.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000458001 PE=4 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 9.596e-67 Identity = 124/156 (79.49%), Postives = 139/156 (89.10%), Query Frame = 3 Query: 531 LKPGEYPPSNTVPAFPVQTQAQICKLDLSNELFGGVKDACGKDLDRSRCCPVLAAWLFAAHARSALEVTADAPAPSSGELPMMPDDSQKCVNSLQDSILTRNIRIPQPNATCDAILCFCGIRLHQISSLSCPAAFNVSGSQKNATPTAAVRNLENN 998 +KPG+Y NTVPAFPVQT+ Q C+LDLS ELFGGV DACG++LDRSRCCPVLAAWLFAAHARSAL+V APAP+S +LPMMPDDSQKCVNSLQ S+ +RNI IPQPNATCDAILCFCGIRLHQI+SLSCPAAFN+S S +NATPTAAV+NLE N Sbjct: 1 MKPGDYSTPNTVPAFPVQTETQTCRLDLSAELFGGVNDACGRNLDRSRCCPVLAAWLFAAHARSALQVA--APAPASSDLPMMPDDSQKCVNSLQSSLQSRNIHIPQPNATCDAILCFCGIRLHQITSLSCPAAFNIS-SYRNATPTAAVKNLERN 153
BLAST of Pisum_sativum_v1_Contig1479 vs. TrEMBL
Match: D7MDM9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_491965 PE=4 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 2.071e-61 Identity = 116/158 (73.42%), Postives = 135/158 (85.44%), Query Frame = 3 Query: 525 QPLKPGEYPPSNTVPAFPVQTQAQICKLDLSNELFGGVKDACGKDLDRSRCCPVLAAWLFAAHARSALEVTADAPAPSSGEL--PMMPDDSQKCVNSLQDSILTRNIRIPQPNATCDAILCFCGIRLHQISSLSCPAAFNVSGSQKNATPTAAVRNLE 992 +P++P NTVPAFPV+TQAQ C+LDLSNELFGGV +ACG++LDRSRCCPVLAAWLFAAHARSAL++ A AP P S + PM PDDSQKCVN+LQ ++L + I+IPQPN++CDAILCFCGIRLHQISSLSCPAAFNVS KNATPTAAV+NLE Sbjct: 27 EPVQP------NTVPAFPVETQAQSCRLDLSNELFGGVNEACGRNLDRSRCCPVLAAWLFAAHARSALQLPAPAPTPESSDPDEPMKPDDSQKCVNTLQSALLIKQIKIPQPNSSCDAILCFCGIRLHQISSLSCPAAFNVSSGFKNATPTAAVKNLE 178
BLAST of Pisum_sativum_v1_Contig1479 vs. TrEMBL
Match: A2YMK6_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26458 PE=4 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 2.015e-40 Identity = 94/175 (53.71%), Postives = 115/175 (65.71%), Query Frame = 3 Query: 519 PNQPLKPGEYPPSNTVPAFPVQTQAQICKLDLSNELFGGVKDACGK-----DLDRSRCCPVLAAWLFAAHARSALEVTADAPAPSSGEL------PMMPDDSQKCVNSLQDSILTRNIRIPQPNATCDAILCFCGIRLHQISSLSCPAAFNVSG----SQKNATPTAAVRNLENN 998 P+ PL + P+NT + + C LDLS ELFGGV ACG LDR RCCPVLAAWLFAAHAR+AL V A APA + L PM+P D+Q+CV++L ++ R + +P+PNATCD +LCFCGIRLHQI SL CPAAF V G + KNATPTAAV+ LE + Sbjct: 24 PSYPLSQAQ-SPANTSSG---SSTSPPCHLDLSAELFGGVAAACGAGGGPGSLDRGRCCPVLAAWLFAAHARTALSVPAPAPALAGEGLDGREDEPMVPYDNQRCVDALGSALERRGVALPRPNATCDTVLCFCGIRLHQIGSLRCPAAFAVGGGGAAAAKNATPTAAVKELEKS 194
BLAST of Pisum_sativum_v1_Contig1479 vs. TrEMBL
Match: Q6Z418_ORYSJ (Os07g0557700 protein OS=Oryza sativa subsp. japonica GN=P0567H04.2 PE=4 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.437e-40 Identity = 92/175 (52.57%), Postives = 114/175 (65.14%), Query Frame = 3 Query: 519 PNQPLKPGEYPPSNTVPAFPVQTQAQICKLDLSNELFGGVKDACGK-----DLDRSRCCPVLAAWLFAAHARSALEVTADAPAPSSGEL------PMMPDDSQKCVNSLQDSILTRNIRIPQPNATCDAILCFCGIRLHQISSLSCPAAFNVSG----SQKNATPTAAVRNLENN 998 P+ PL + P + + + + C LDLS ELFGGV ACG LDR RCCPVLAAWLFAAHAR+AL V A APA + L PM+P D+Q+CV++L ++ R + +P+PNATCD +LCFCGIRLHQI SL CPAAF V G + KNATPTAAV+ LE + Sbjct: 24 PSYPLSQAQSPANTSSGG----STSPPCHLDLSAELFGGVAAACGAGGGPGSLDRGRCCPVLAAWLFAAHARTALSVPAPAPALAGEGLDGGEDEPMVPYDNQRCVDALGSALERRGVALPRPNATCDTVLCFCGIRLHQIGSLRCPAAFAVGGGGAAAAKNATPTAAVKELEKS 194
BLAST of Pisum_sativum_v1_Contig1479 vs. TrEMBL
Match: C5XBI6_SORBI (Putative uncharacterized protein Sb02g036230 OS=Sorghum bicolor GN=Sb02g036230 PE=4 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.000e-39 Identity = 92/178 (51.69%), Postives = 118/178 (66.29%), Query Frame = 3 Query: 519 PNQPLKPGEYPPSNTVPAFPVQTQAQICKLDLSNELFGGVKDACGK-----DLDRSRCCPVLAAWLFAAHARSALEVTADAPAPSS-----------GELPMMPDDSQKCVNSLQDSILTRNIRIPQPNATCDAILCFCGIRLHQISSLSCPAAFNV--SGSQKNATPTAAVRNLENN 998 P+ PL + P +++ P+ + + C LDLS ELFGGV ACG LDR RCCPVLAAWLFAAHAR+AL V APAPS+ + PM+P D+Q+CV++L ++ R + +P+PNATCD +LCFCGIRLHQI SL CPAAF V + KNATPTAAV++LE + Sbjct: 25 PSFPLSQAQSPSNSSSPS---NSSSPPCHLDLSAELFGGVAAACGAGGGPGSLDRGRCCPVLAAWLFAAHARTALSVPP-APAPSALAGEEGLGPGGDDGPMVPYDNQRCVDALGAALEKRGVALPRPNATCDTVLCFCGIRLHQIGSLRCPAAFAVGAGAAAKNATPTAAVKDLEKS 198
BLAST of Pisum_sativum_v1_Contig1479 vs. TrEMBL
Match: D7SJ88_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00008405001 PE=4 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.002e-31 Identity = 77/160 (48.12%), Postives = 102/160 (63.75%), Query Frame = 3 Query: 507 PVTDPNQ--PLKPGEYPPSNTVPAFPVQTQAQICKLDLSNELFGGVKDAC--GK----DLDRSRCCPVLAAWLFAAHARSALEVTADAPAPSSG--ELPMMPDDSQKCVNSLQDSILTRNIRIPQPNATCDAILCFCGIRLHQISSLSCPAAFNVSGSQK 956 P DP + P P PP T+PAFP Q+ C L+L +ELF G+K AC GK +L RSRCCPVLAAWL++A++ +AL AP + +LP++PDDS+ CVN L+ S+ +R + + +PN TCD + CFCGIRLH LSCP AF+VS K Sbjct: 21 PEPDPVKIHPFHPNPSPPE-TIPAFPEQSDVAGCPLNLPDELFHGIKTACSAGKGASGELRRSRCCPVLAAWLYSAYSGTALGRAKRGLAPEATPYDLPLLPDDSETCVNDLEKSLKSRGVELVKPNETCDVVYCFCGIRLH---PLSCPEAFSVSSKGK 176
BLAST of Pisum_sativum_v1_Contig1479 vs. TrEMBL
Match: B9I2G6_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_423355 PE=4 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 6.497e-31 Identity = 77/178 (43.26%), Postives = 106/178 (59.55%), Query Frame = 3 Query: 507 PVTDPN--QPLKPGEYPPSNTVPAFPVQTQAQICKLDLSNELFGGVKDACGKD------LDRSRCCPVLAAWLFAAHARSALE-VTADAPAPSSG-----ELPMMPDDSQKCVNSLQDSILTRNIRIPQPNATCDAILCFCGIRLHQISSLSCPAAFNVSGSQKNATPTAAVRNLENN 998 P DP QP KPG PP+ T+PA P Q+ C L+L NELF G+K ACG L R+RCCPVLAAWL++A++ +AL PA ++G ++P++PDDS+ CV+ L + + I + +PN TCD + C+CGIRLH LSCP AF+++ K V+ LE N Sbjct: 13 PNPDPATIQPFKPGPTPPA-TIPASPEQSNLAGCPLELPNELFNGIKSACGSGSSASGHLHRTRCCPVLAAWLYSAYSATALSRANKVIPATTTGRSPSYDMPLLPDDSETCVDGLSKGLKEKGIELVKPNETCDVVYCYCGIRLH---PLSCPEAFSLNRKGK-LVGDKRVKKLERN 185
BLAST of Pisum_sativum_v1_Contig1479 vs. TAIR peptide
Match: AT4G28100.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:13965300-13966697 REVERSE LENGTH=304) HSP 1 Score: 242.662 bits (618), Expect = 2.505e-64 Identity = 117/158 (74.05%), Postives = 136/158 (86.08%), Query Frame = 3 Query: 525 QPLKPGEYPPSNTVPAFPVQTQAQICKLDLSNELFGGVKDACGKDLDRSRCCPVLAAWLFAAHARSALEVTADAPAPSSGEL--PMMPDDSQKCVNSLQDSILTRNIRIPQPNATCDAILCFCGIRLHQISSLSCPAAFNVSGSQKNATPTAAVRNLE 992 +P++P NTVPAFPV+TQAQ C+LDLSNELFGGV +ACG++LDRSRCCPVLAAWLFAAHARSAL++ A AP P S + PM PDDSQKCVN+LQ ++LT+ I+IPQPN++CDAILCFCGIRLHQISSLSCPAAFNVS KNATPTAAV+NLE Sbjct: 27 EPVQP------NTVPAFPVETQAQSCRLDLSNELFGGVNEACGRNLDRSRCCPVLAAWLFAAHARSALQLPAPAPTPESSDPDEPMKPDDSQKCVNTLQSALLTKQIKIPQPNSSCDAILCFCGIRLHQISSLSCPAAFNVSSGFKNATPTAAVKNLE 178
BLAST of Pisum_sativum_v1_Contig1479 vs. TAIR peptide
Match: AT3G18050.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28100.1); Has 67 Blast hits to 66 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:6180931-6182593 FORWARD LENGTH=335) HSP 1 Score: 130.568 bits (327), Expect = 1.387e-30 Identity = 69/159 (43.40%), Postives = 97/159 (61.01%), Query Frame = 3 Query: 504 QPVTDPNQPLKPGEYPPSNTVPAFPVQTQAQICKLDLSNELFGGVKDAC-GKDLDRSRCCPVLAAWLFAAHARSALEVTADAPAPSSG-----------ELPMMPDDSQKCVNSLQDSILTRNIRIPQPNATCDAILCFCGIRLHQISSLSCPAAFNVS 944 +PVT QP + PP+ T+PAFP Q+ C LDL +LF G+K AC GK L + +CCPVL AWL++A++ +AL + A A +S ++P++PDDS+ CV+ L S+ R I + +PN TCD + C+CGIRLH LSC AF V+ Sbjct: 26 EPVTV--QPFRVKSSPPA-TIPAFPEQSDFSGCPLDLPEDLFHGIKSACSGKKLHKGKCCPVLGAWLYSAYSTTALSRSISAAARNSSSSSAAVTTPEEDMPLLPDDSETCVDGLGKSLRQRGIELTRPNETCDVVYCYCGIRLH---PLSCSEAFRVN 178 The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig1479 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 1
BLAST of Pisum_sativum_v1_Contig1479 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of Pisum_sativum_v1_Contig1479 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Sequences
The
following sequences are available for this feature:
contig sequence >Pisum_sativum_v1_Contig1479 ID=Pisum_sativum_v1_Contig1479; Name=Pisum_sativum_v1_Contig1479; organism=Pisum sativum; type=contig; length=1000bpback to top |