Pisum_sativum_v1_Contig1679

Contig Overview
NamePisum_sativum_v1_Contig1679
Unique NamePisum_sativum_v1_Contig1679
Typecontig
OrganismPisum sativum (pea)
Sequence length588
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FG529265FG529265Pisum sativumEST
FG529592FG529592Pisum sativumEST
FG531794FG531794Pisum sativumEST
FG536627FG536627Pisum sativumEST


Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
FG529265ESTFG529265:1..384 +
FG529592ESTFG529592:67..526 +
FG531794ESTFG531794:74..500 +
FG536627ESTFG536627:74..588 +
Homology
[Close]
BLAST of Pisum_sativum_v1_Contig1679 vs. TrEMBL
Match: Q2PES5_TRIPR (Putative uncharacterized protein OS=Trifolium pratense PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.880e-16
Identity = 47/86 (54.65%), Postives = 49/86 (56.98%), Query Frame = 1 
Query:    1 KVHDDPXXXXXXXXXXXXXXXXXXXXWEERVQSRDQLKAEKQQKRSANIAERINDXXXXXXXXXXXXXXXPGFEGRREGFINDASG 258
            KVHDDP                    WEERVQSR+QLKAEKQ+KRS NIAERIND               PGFEGRREGFIN ASG
Sbjct:  300 KVHDDPKLIKKSIHKGKKRQEKNAEKWEERVQSREQLKAEKQKKRSTNIAERINDKKMRKIAKREKKLLRPGFEGRREGFINGASG 385
[Close]
BLAST of Pisum_sativum_v1_Contig1679 vs. TrEMBL
Match: C6T772_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.016e-12
Identity = 37/83 (44.58%), Postives = 46/83 (55.42%), Query Frame = 1 
Query:    1 KVHDDPXXXXXXXXXXXXXXXXXXXXWEERVQSRDQLKAEKQQKRSANIAERINDXXXXXXXXXXXXXXXPGFEGRREGFIND 249
            KVHDDP                    W++R+Q+RDQLKAEKQQKRS NI+ RI++               PGFEGR+EGF+ND
Sbjct:  265 KVHDDPKLLHKSIHKEKKKQQKNAEKWKDRIQTRDQLKAEKQQKRSENISARIHEKKMRKIAKREKKLMRPGFEGRKEGFMND 347
[Close]
BLAST of Pisum_sativum_v1_Contig1679 vs. TrEMBL
Match: B9RJ85_RICCO (Caldesmon, putative OS=Ricinus communis GN=RCOM_1032260 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.438e-10
Identity = 33/85 (38.82%), Postives = 47/85 (55.29%), Query Frame = 1 
Query:    1 KVHDDPXXXXXXXXXXXXXXXXXXXXWEERVQSRDQLKAEKQQKRSANIAERINDXXXXXXXXXXXXXXXPGFEGRREGFINDAS 255
            KVHD+P                    W+ER++++ ++KAEKQQKRS NIA+RI+                PGFEGR+EG++N+AS
Sbjct:  277 KVHDNPKLLNQSLKKEKKRQQKNAEKWKERLETQQKMKAEKQQKRSQNIADRIHKKKMNKIAKREKKLLRPGFEGRKEGYVNEAS 361
[Close]
BLAST of Pisum_sativum_v1_Contig1679 vs. TrEMBL
Match: D7LYB9_ARALY (Putative uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_487312 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.439e-9
Identity = 34/83 (40.96%), Postives = 41/83 (49.40%), Query Frame = 1 
Query:    1 KVHDDPXXXXXXXXXXXXXXXXXXXXWEERVQSRDQLKAEKQQKRSANIAERINDXXXXXXXXXXXXXXXPGFEGRREGFIND 249
            KVHDDP                    W+ERV+ + + K EKQQKRS NIA+RI                 PGFEGR+EGFIN+
Sbjct:  268 KVHDDPKLLKQSIHKDKKRHEKNAEKWKERVEGQQKFKVEKQQKRSGNIADRIEQNKMRKIAKREKKLLRPGFEGRKEGFINE 350
[Close]
BLAST of Pisum_sativum_v1_Contig1679 vs. TrEMBL
Match: Q9FLD3_ARATH (AT5g05210/K2A11_8 OS=Arabidopsis thaliana GN=At5g05210 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.880e-9
Identity = 33/83 (39.76%), Postives = 41/83 (49.40%), Query Frame = 1 
Query:    1 KVHDDPXXXXXXXXXXXXXXXXXXXXWEERVQSRDQLKAEKQQKRSANIAERINDXXXXXXXXXXXXXXXPGFEGRREGFIND 249
            KVHDDP                    W+ER++ + + K EKQQKRS NIA+RI                 PGFEGR+EGFIN+
Sbjct:  301 KVHDDPKLLKQSIHKDKKRQEKNAEKWKERIEGQQKFKVEKQQKRSGNIADRIEQNKMRKIAKREKKLLRPGFEGRKEGFINE 383
[Close]
BLAST of Pisum_sativum_v1_Contig1679 vs. TrEMBL
Match: B9HKW2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_657330 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.880e-9
Identity = 34/83 (40.96%), Postives = 44/83 (53.01%), Query Frame = 1 
Query:    1 KVHDDPXXXXXXXXXXXXXXXXXXXXWEERVQSRDQLKAEKQQKRSANIAERINDXXXXXXXXXXXXXXXPGFEGRREGFIND 249
            KVHDDP                    W+ERV+++ ++KAEKQQKRS NIA+RI                 PGFEGR+EG+IN+
Sbjct:  262 KVHDDPKLLKQSLKKDSKKHQKNTEKWKERVETQLKMKAEKQQKRSRNIADRIEQKKMRRIEKRERKLTRPGFEGRKEGYINE 344
[Close]
BLAST of Pisum_sativum_v1_Contig1679 vs. TrEMBL
Match: B9HKW1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_766510 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.880e-9
Identity = 34/83 (40.96%), Postives = 44/83 (53.01%), Query Frame = 1 
Query:    1 KVHDDPXXXXXXXXXXXXXXXXXXXXWEERVQSRDQLKAEKQQKRSANIAERINDXXXXXXXXXXXXXXXPGFEGRREGFIND 249
            KVHDDP                    W+ERV+++ ++KAEKQQKRS NIA+RI                 PGFEGR+EG+IN+
Sbjct:  103 KVHDDPKLLKQSLKKDSKKHQKNTEKWKERVETQLKMKAEKQQKRSRNIADRIEQKKMRRIEKRERKLTRPGFEGRKEGYINE 185
[Close]
BLAST of Pisum_sativum_v1_Contig1679 vs. TrEMBL
Match: A8MR82_ARATH (Uncharacterized protein At5g05210.2 OS=Arabidopsis thaliana GN=At5g05210 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.880e-9
Identity = 33/83 (39.76%), Postives = 41/83 (49.40%), Query Frame = 1 
Query:    1 KVHDDPXXXXXXXXXXXXXXXXXXXXWEERVQSRDQLKAEKQQKRSANIAERINDXXXXXXXXXXXXXXXPGFEGRREGFIND 249
            KVHDDP                    W+ER++ + + K EKQQKRS NIA+RI                 PGFEGR+EGFIN+
Sbjct:  293 KVHDDPKLLKQSIHKDKKRQEKNAEKWKERIEGQQKFKVEKQQKRSGNIADRIEQNKMRKIAKREKKLLRPGFEGRKEGFINE 375
[Close]
BLAST of Pisum_sativum_v1_Contig1679 vs. TrEMBL
Match: D7SZQ9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_49.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027946001 PE=4 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 4.188e-9
Identity = 33/81 (40.74%), Postives = 42/81 (51.85%), Query Frame = 1 
Query:    1 KVHDDPXXXXXXXXXXXXXXXXXXXXWEERVQSRDQLKAEKQQKRSANIAERINDXXXXXXXXXXXXXXXPGFEGRREGFI 243
            KVHDDP                    W+ERV++RD+++A+KQQ RS NI ERI+                PGFEGR+EGFI
Sbjct:  256 KVHDDPKLLKQSIHKGKKRHQKNVEKWKERVETRDKMRAQKQQTRSENIGERIHQKKMRRIAKREKKLMRPGFEGRKEGFI 336
[Close]
BLAST of Pisum_sativum_v1_Contig1679 vs. TrEMBL
Match: B9HSV6_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_229960 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.078e-8
Identity = 32/83 (38.55%), Postives = 42/83 (50.60%), Query Frame = 1 
Query:    1 KVHDDPXXXXXXXXXXXXXXXXXXXXWEERVQSRDQLKAEKQQKRSANIAERINDXXXXXXXXXXXXXXXPGFEGRREGFIND 249
            KVHDDP                    W+ER++S+ ++KAEKQQKRS NIA RI                 PGFEG ++G+IN+
Sbjct:  240 KVHDDPKLLKQSLKKGEKRHQKNAEKWKERIESQHKMKAEKQQKRSKNIAGRIEQKKMRKIEKREKKLMRPGFEGPKQGYINE 322
[Close]
BLAST of Pisum_sativum_v1_Contig1679 vs. TAIR peptide
Match: AT5G05210.2 (| Symbols: | Surfeit locus protein 6 | chr5:1548398-1549534 FORWARD LENGTH=378)

HSP 1 Score: 66.2402 bits (160), Expect = 1.432e-11
Identity = 33/83 (39.76%), Postives = 41/83 (49.40%), Query Frame = 1 
Query:    1 KVHDDPXXXXXXXXXXXXXXXXXXXXWEERVQSRDQLKAEKQQKRSANIAERINDXXXXXXXXXXXXXXXPGFEGRREGFIND 249
            KVHDDP                    W+ER++ + + K EKQQKRS NIA+RI                 PGFEGR+EGFIN+
Sbjct:  293 KVHDDPKLLKQSIHKDKKRQEKNAEKWKERIEGQQKFKVEKQQKRSGNIADRIEQNKMRKIAKREKKLLRPGFEGRKEGFINE 375
[Close]
BLAST of Pisum_sativum_v1_Contig1679 vs. TAIR peptide
Match: AT5G05210.1 (| Symbols: | Surfeit locus protein 6 | chr5:1548198-1549534 FORWARD LENGTH=386)

HSP 1 Score: 66.2402 bits (160), Expect = 1.432e-11
Identity = 33/83 (39.76%), Postives = 41/83 (49.40%), Query Frame = 1 
Query:    1 KVHDDPXXXXXXXXXXXXXXXXXXXXWEERVQSRDQLKAEKQQKRSANIAERINDXXXXXXXXXXXXXXXPGFEGRREGFIND 249
            KVHDDP                    W+ER++ + + K EKQQKRS NIA+RI                 PGFEGR+EGFIN+
Sbjct:  301 KVHDDPKLLKQSIHKDKKRQEKNAEKWKERIEGQQKFKVEKQQKRSGNIADRIEQNKMRKIAKREKKLLRPGFEGRKEGFINE 383
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig1679 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q2PES5_TRIPR7.880e-1654.65Putative uncharacterized protein OS=Trifolium prat... [more]
C6T772_SOYBN9.016e-1244.58Putative uncharacterized protein OS=Glycine max PE... [more]
B9RJ85_RICCO8.438e-1038.82Caldesmon, putative OS=Ricinus communis GN=RCOM_10... [more]
D7LYB9_ARALY1.439e-940.96Putative uncharacterized protein (Fragment) OS=Ara... [more]
Q9FLD3_ARATH1.880e-939.76AT5g05210/K2A11_8 OS=Arabidopsis thaliana GN=At5g0... [more]
B9HKW2_POPTR1.880e-940.96Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HKW1_POPTR1.880e-940.96Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A8MR82_ARATH1.880e-939.76Uncharacterized protein At5g05210.2 OS=Arabidopsis... [more]
D7SZQ9_VITVI4.188e-940.74Whole genome shotgun sequence of line PN40024, sca... [more]
B9HSV6_POPTR2.078e-838.55Predicted protein (Fragment) OS=Populus trichocarp... [more]
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BLAST of Pisum_sativum_v1_Contig1679 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G05210.21.432e-1139.76| Symbols: | Surfeit locus protein 6 | chr5:15483... [more]
AT5G05210.11.432e-1139.76| Symbols: | Surfeit locus protein 6 | chr5:15481... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007019Surfeit locus 6PANTHERPTHR14369SURFEIT LOCUS PROTEIN 6coord: 1..85
score: 1.5
IPR007019Surfeit locus 6PFAMPF04935SURF6coord: 1..67
score: 2.1
NoneNo IPR availableSEGsegsegcoord: 7..26
score: NAcoord: 56..70
score
NoneNo IPR availableSEGsegsegcoord: 19..43
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig1679 ID=Pisum_sativum_v1_Contig1679; Name=Pisum_sativum_v1_Contig1679; organism=Pisum sativum; type=contig; length=588bp
AAGGTCCACGATGATCCCAAGCTGATAAAAAAGAGCATACAGAAGGGGAA
GAAGAAACACGAGAAAAATGCAGGGAAATGGGAAGAAAGAGTTCAATCAA
GGGATCAGTTGAAGGCAGAGAAACAACAGAAAAGGTCGGCTAATATAGCT
GAGAGGATTAATGATAAGAAAAAGAGGAAGATTGCTAAGAGAGAGAAAAA
GCTATTACGGCCTGGCTTTGAAGGTCGCAGGGAAGGTTTTATTAATGATG
CTTCCGGCTAACACTGCTGCGAAAATTATTGATTTGTGCCTCTTTGCAAT
GTTATCAGAGGCAACCAAACATCTATCAACTTCAATGTGGGTTGATTTGT
TGTGGCTCATCTGTGCATTGTTATCCTAGGCAACCAAACATCCATGGGGT
TTTAGAAGATTTCTTTACATTGAAAAATTGTTGTTTAGTGTTATTAACCC
CCATGGTATATTTTGGGAATTATGCATCCTTTTTTGACTTTTCGTTATCA
CTGGAATGCAAGAATTTTGTTGAATGATAGTTAATCACATGTTTGTTTAC
AGATTTGTATGTCCATCGGATTAGGTTAAACNNNNNAN
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR007019SURF6