Pisum_sativum_v1_Contig2146

Contig Overview
NamePisum_sativum_v1_Contig2146
Unique NamePisum_sativum_v1_Contig2146
Typecontig
OrganismPisum sativum (pea)
Sequence length476
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GH719574GH719574Pisum sativumEST
CD861239CD861239Pisum sativumEST
GH719811GH719811Pisum sativumEST
GH720178GH720178Pisum sativumEST
CD861019CD861019Pisum sativumEST
CD861127CD861127Pisum sativumEST
CD860324CD860324Pisum sativumEST


Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GH719574ESTGH719574:1..421 +
CD861239ESTCD861239:2..421 -
GH719811ESTGH719811:32..376 +
GH720178ESTGH720178:6..420 +
CD861019ESTCD861019:16..441 +
CD861127ESTCD861127:25..448 +
CD860324ESTCD860324:37..476 -
Homology
[Close]
BLAST of Pisum_sativum_v1_Contig2146 vs. TrEMBL
Match: C6SZB0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.060e-18
Identity = 54/88 (61.36%), Postives = 63/88 (71.59%), Query Frame = 3 
Query:   45 MADFQQKLEALKNLVGLLNNMEDKGETEPQNASPS-------TPQHGANHPRSSGKYSNSGIQNIKGLSNQTGFTEGDANGTINLGDL 287
            MAD Q++L+ALK LVG+LNNM D+GET   NA+ S        P  G N  RS GKY+NSG Q IKGLSNQTGFTEG+ANG IN G+L
Sbjct:    1 MADLQERLDALKGLVGVLNNM-DEGETHNNNATSSPNNSHSPAPMPGRN--RSVGKYNNSGTQKIKGLSNQTGFTEGNANGAINFGNL 85
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2146 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
C6SZB0_SOYBN1.060e-1861.36Putative uncharacterized protein OS=Glycine max PE... [more]
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Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig2146 ID=Pisum_sativum_v1_Contig2146; Name=Pisum_sativum_v1_Contig2146; organism=Pisum sativum; type=contig; length=476bp
CAAAATAAACACATACAAATTATTAGCAGAGTGAATTCCATTCCATGGCT
GATTTTCAACAAAAACTGGAAGCACTGAAGAATCTTGTTGGTTTGCTAAA
CAACATGGAGGATAAAGGTGAAACTGAACCTCAAAACGCTTCACCTTCAA
CACCTCAGCATGGAGCGAACCATCCTCGCTCATCTGGAAAATATAGCAAC
TCTGGGATACAGAATATAAAAGGCTTAAGTAATCAAACTGGTTTCACTGA
AGGCGATGCTAATGGAACTATCAACCTTGGTGATTTACGTGTGTAAAATT
CACTAATGCCTATGTATGAATAAGTTACTAGAATAAGTGCTTTTACGCAC
GCCTCCAATGCCTATGTATGAATAAGTTACTAGAATAAGTGCTTTTATGC
ACGCCTCCAATATCTATCAAGTTTTATTATATGTCTACTTTAATTAACAG
AAGCAATAATATATTAGCTTTCTACC
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