Pisum_sativum_v1_Contig2724

Contig Overview
NamePisum_sativum_v1_Contig2724
Unique NamePisum_sativum_v1_Contig2724
Typecontig
OrganismPisum sativum (pea)
Sequence length500
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GH720191GH720191Pisum sativumEST
AM161654AM161654Pisum sativumEST


Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GH720191ESTGH720191:6..476 +
AM161654ESTAM161654:1..500 -
Homology
[Close]
BLAST of Pisum_sativum_v1_Contig2724 vs. TrEMBL
Match: B7FGR5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.501e-49
Identity = 98/122 (80.33%), Postives = 107/122 (87.70%), Query Frame = -1 
Query:   27 LPQMMEEDVIPSLKTILESNKDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTGITGPKGFSLSSYNSGASTVEPFLIDEKKITSKHIVFWVEKRLAAQGIIPVWKD*FIKNEFSFCLQMM 392
            LPQMMEEDVIPSLK ILE+ +DLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTG+TGPKGFSLSSYNSGASTVEPFL+DEKK+ SK IVFWVEKRLAAQ      +   + N+FSF LQM+
Sbjct:  105 LPQMMEEDVIPSLKAILEAQQDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTGLTGPKGFSLSSYNSGASTVEPFLVDEKKVNSKLIVFWVEKRLAAQRDYSCMERLILINKFSFWLQMV 226
[Close]
BLAST of Pisum_sativum_v1_Contig2724 vs. TrEMBL
Match: C6SVB3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.891e-47
Identity = 92/109 (84.40%), Postives = 103/109 (94.50%), Query Frame = -1 
Query:   69 LPQMMEEDVIPSLKTILESNKDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTG-ITGPKGFSLSSYNSGASTVEPFLIDEKKITSKHIVFWVEKRLAAQGIIPVWKD 392
            LPQMMEEDVIPSLK+I E+ +D S+IELVF+DNKLEGSFLKKGNPYSFWAFFPTG + GPKGFSLSS NSGASTVEPFLIDEKKIT++HI+FWV+KRLAAQGIIPVW+D
Sbjct:  106 LPQMMEEDVIPSLKSIFEAQEDFSNIELVFKDNKLEGSFLKKGNPYSFWAFFPTGNLIGPKGFSLSSNNSGASTVEPFLIDEKKITARHIIFWVKKRLAAQGIIPVWED 214
[Close]
BLAST of Pisum_sativum_v1_Contig2724 vs. TrEMBL
Match: D7SZ84_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2377.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00006115001 PE=4 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.226e-46
Identity = 91/109 (83.49%), Postives = 101/109 (92.66%), Query Frame = -1 
Query:   69 LPQMMEEDVIPSLKTILESNKDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTGI-TGPKGFSLSSYNSGASTVEPFLIDEKKITSKHIVFWVEKRLAAQGIIPVWKD 392
            LPQMMEEDVIPSLK+ILE+  DLS+IEL FQDN+LEGSF KKG PYSFWAFFP G+ TGPKGFSLSSY SG+STVEPFLIDEK+IT+KH+VFWVEKRLAAQGIIPVWK+
Sbjct:   57 LPQMMEEDVIPSLKSILEAQDDLSEIELSFQDNRLEGSFQKKGIPYSFWAFFPNGVLTGPKGFSLSSYGSGSSTVEPFLIDEKRITAKHVVFWVEKRLAAQGIIPVWKE 165
[Close]
BLAST of Pisum_sativum_v1_Contig2724 vs. TrEMBL
Match: A5ATF4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015578 PE=4 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.038e-45
Identity = 90/109 (82.57%), Postives = 100/109 (91.74%), Query Frame = -1 
Query:   69 LPQMMEEDVIPSLKTILESNKDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTGI-TGPKGFSLSSYNSGASTVEPFLIDEKKITSKHIVFWVEKRLAAQGIIPVWKD 392
            LPQMMEEDVIPSLK+ILE+  DLS+IEL FQDN+LEGSF KKG PYSFWAFF  G+ TGPKGFSLSSY SG+STVEPFLIDEK+IT+KH+VFWVEKRLAAQGIIPVWK+
Sbjct:  112 LPQMMEEDVIPSLKSILEAQDDLSEIELSFQDNRLEGSFQKKGIPYSFWAFFXNGVLTGPKGFSLSSYGSGSSTVEPFLIDEKRITAKHVVFWVEKRLAAQGIIPVWKE 220
[Close]
BLAST of Pisum_sativum_v1_Contig2724 vs. TrEMBL
Match: B9SF00_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1211510 PE=4 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 6.725e-45
Identity = 87/109 (79.82%), Postives = 99/109 (90.83%), Query Frame = -1 
Query:   69 LPQMMEEDVIPSLKTILESNKDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTGI-TGPKGFSLSSYNSGASTVEPFLIDEKKITSKHIVFWVEKRLAAQGIIPVWKD 392
            LPQ+MEEDVIPSLK I E+ +D++++EL F DN+LEGSF KKGNPYSFWAFFP+G+ TG KGFSLSSY  GASTVEPFLIDEKKIT+KHIVFWVEKRLAAQGIIPVWK+
Sbjct:   94 LPQLMEEDVIPSLKAIFETEQDITELELSFNDNRLEGSFRKKGNPYSFWAFFPSGVLTGTKGFSLSSYGLGASTVEPFLIDEKKITAKHIVFWVEKRLAAQGIIPVWKE 202
[Close]
BLAST of Pisum_sativum_v1_Contig2724 vs. TrEMBL
Match: B9IAY1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_573153 PE=4 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 6.725e-45
Identity = 86/107 (80.37%), Postives = 95/107 (88.79%), Query Frame = -1 
Query:   72 LPQMMEEDVIPSLKTILESNKDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTGITGPKGFSLSSYNSGASTVEPFLIDEKKITSKHIVFWVEKRLAAQGIIPVWK 392
            L Q+MEEDVIPSLK  LE+  D++++EL F DN+LEGSFL+KG PYSFWAFFP G+TGPKGFSLSSY SG STVEPFLIDEKKIT KHIVFWVEKRLAAQGIIPVWK
Sbjct:   86 LAQLMEEDVIPSLKATLEAQDDITELELSFTDNRLEGSFLQKGTPYSFWAFFPDGLTGPKGFSLSSYGSGVSTVEPFLIDEKKITEKHIVFWVEKRLAAQGIIPVWK 192
[Close]
BLAST of Pisum_sativum_v1_Contig2724 vs. TrEMBL
Match: B9GTF4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_552682 PE=4 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.402e-42
Identity = 84/108 (77.78%), Postives = 94/108 (87.04%), Query Frame = -1 
Query:   72 LPQMMEEDVIPSLKTILESNKDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTGI-TGPKGFSLSSYNSGASTVEPFLIDEKKITSKHIVFWVEKRLAAQGIIPVWK 392
            L Q+MEEDVIPSLK  LE+   ++++EL F+D +LEGSFLKKG PYSFWAFFP G+ TGPKGFSLSSY SG STVEPFLIDEKKIT KHIVFWVEKRLAAQGIIPVW+
Sbjct:   49 LSQLMEEDVIPSLKATLEAQDHITELELPFEDKRLEGSFLKKGTPYSFWAFFPDGVLTGPKGFSLSSYGSGVSTVEPFLIDEKKITEKHIVFWVEKRLAAQGIIPVWR 156
[Close]
BLAST of Pisum_sativum_v1_Contig2724 vs. TrEMBL
Match: D7T599_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_227.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00004126001 PE=4 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.714e-40
Identity = 82/102 (80.39%), Postives = 92/102 (90.20%), Query Frame = -1 
Query:   69 DVIPSLKTILESNKDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTGI-TGPKGFSLSSYNSGASTVEPFLIDEKKITSKHIVFWVEKRLAAQGIIPVWKD 371
            DVIPSLK+I E+  DLS+IEL FQDN+LEGSF KKG PYSFWAFF  G+ TGPKGFSLSSY SG+STVEPFLIDEK+IT+KH+VFWVEKRLAAQGIIPVWK+
Sbjct:   42 DVIPSLKSIPEAQDDLSEIELSFQDNRLEGSFQKKGIPYSFWAFFLNGVLTGPKGFSLSSYGSGSSTVEPFLIDEKRITAKHVVFWVEKRLAAQGIIPVWKE 143
[Close]
BLAST of Pisum_sativum_v1_Contig2724 vs. TrEMBL
Match: Q93Z84_ARATH (At2g04039/At2g04039 OS=Arabidopsis thaliana GN=At2g04039 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.514e-40
Identity = 81/107 (75.70%), Postives = 92/107 (85.98%), Query Frame = -1 
Query:   75 LPQMMEEDVIPSLKTILESNKDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTG-ITGPKGFSLSSYNSGASTVEPFLIDEKKITSKHIVFWVEKRLAAQGIIPVW 392
            L QMMEEDVIP L+ ILES  D+SDI+L FQD+KLEG FLKK  PYSFWAFFPTG +TG KGFS+SS+ SG STVEPFL+DE+K T+ H+VFWVEKRLAAQGIIPVW
Sbjct:   91 LRQMMEEDVIPPLQAILESQDDISDIDLSFQDDKLEGFFLKKSIPYSFWAFFPTGNLTGAKGFSISSHGSGPSTVEPFLVDERKPTANHVVFWVEKRLAAQGIIPVW 197
[Close]
BLAST of Pisum_sativum_v1_Contig2724 vs. TrEMBL
Match: Q3EC70_ARATH (Putative uncharacterized protein At2g04039.2 OS=Arabidopsis thaliana GN=At2g04039 PE=4 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.514e-40
Identity = 81/107 (75.70%), Postives = 92/107 (85.98%), Query Frame = -1 
Query:   75 LPQMMEEDVIPSLKTILESNKDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTG-ITGPKGFSLSSYNSGASTVEPFLIDEKKITSKHIVFWVEKRLAAQGIIPVW 392
            L QMMEEDVIP L+ ILES  D+SDI+L FQD+KLEG FLKK  PYSFWAFFPTG +TG KGFS+SS+ SG STVEPFL+DE+K T+ H+VFWVEKRLAAQGIIPVW
Sbjct:   57 LRQMMEEDVIPPLQAILESQDDISDIDLSFQDDKLEGFFLKKSIPYSFWAFFPTGNLTGAKGFSISSHGSGPSTVEPFLVDERKPTANHVVFWVEKRLAAQGIIPVW 163
[Close]
BLAST of Pisum_sativum_v1_Contig2724 vs. TAIR peptide
Match: AT2G04039.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 157 Blast hits to 157 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). | chr2:1333714-1334438 FORWARD LENGTH=165)

HSP 1 Score: 166.777 bits (421), Expect = 5.663e-42
Identity = 81/107 (75.70%), Postives = 92/107 (85.98%), Query Frame = -1 
Query:   75 LPQMMEEDVIPSLKTILESNKDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTG-ITGPKGFSLSSYNSGASTVEPFLIDEKKITSKHIVFWVEKRLAAQGIIPVW 392
            L QMMEEDVIP L+ ILES  D+SDI+L FQD+KLEG FLKK  PYSFWAFFPTG +TG KGFS+SS+ SG STVEPFL+DE+K T+ H+VFWVEKRLAAQGIIPVW
Sbjct:   57 LRQMMEEDVIPPLQAILESQDDISDIDLSFQDDKLEGFFLKKSIPYSFWAFFPTGNLTGAKGFSISSHGSGPSTVEPFLVDERKPTANHVVFWVEKRLAAQGIIPVW 163
[Close]
BLAST of Pisum_sativum_v1_Contig2724 vs. TAIR peptide
Match: AT2G04039.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 159 Blast hits to 159 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). | chr2:1333464-1334438 FORWARD LENGTH=199)

HSP 1 Score: 166.777 bits (421), Expect = 5.663e-42
Identity = 81/107 (75.70%), Postives = 92/107 (85.98%), Query Frame = -1 
Query:   75 LPQMMEEDVIPSLKTILESNKDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTG-ITGPKGFSLSSYNSGASTVEPFLIDEKKITSKHIVFWVEKRLAAQGIIPVW 392
            L QMMEEDVIP L+ ILES  D+SDI+L FQD+KLEG FLKK  PYSFWAFFPTG +TG KGFS+SS+ SG STVEPFL+DE+K T+ H+VFWVEKRLAAQGIIPVW
Sbjct:   91 LRQMMEEDVIPPLQAILESQDDISDIDLSFQDDKLEGFFLKKSIPYSFWAFFPTGNLTGAKGFSISSHGSGPSTVEPFLVDERKPTANHVVFWVEKRLAAQGIIPVW 197
[Close]
BLAST of Pisum_sativum_v1_Contig2724 vs. TAIR peptide
Match: AT2G04039.3 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:1333464-1334457 FORWARD LENGTH=206)

HSP 1 Score: 88.1965 bits (217), Expect = 2.560e-18
Identity = 44/59 (74.58%), Postives = 49/59 (83.05%), Query Frame = -1 
Query:  219 LPQMMEEDVIPSLKTILESNKDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTG-ITG 392
            L QMMEEDVIP L+ ILES  D+SDI+L FQD+KLEG FLKK  PYSFWAFFPTG +TG
Sbjct:   91 LRQMMEEDVIPPLQAILESQDDISDIDLSFQDDKLEGFFLKKSIPYSFWAFFPTGNLTG 149
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2724 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FGR5_MEDTR4.501e-4980.33Putative uncharacterized protein OS=Medicago trunc... [more]
C6SVB3_SOYBN1.891e-4784.40Putative uncharacterized protein OS=Glycine max PE... [more]
D7SZ84_VITVI1.226e-4683.49Whole genome shotgun sequence of line PN40024, sca... [more]
A5ATF4_VITVI1.038e-4582.57Putative uncharacterized protein OS=Vitis vinifera... [more]
B9SF00_RICCO6.725e-4579.82Putative uncharacterized protein OS=Ricinus commun... [more]
B9IAY1_POPTR6.725e-4580.37Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GTF4_POPTR1.402e-4277.78Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7T599_VITVI1.714e-4080.39Whole genome shotgun sequence of line PN40024, sca... [more]
Q93Z84_ARATH6.514e-4075.70At2g04039/At2g04039 OS=Arabidopsis thaliana GN=At2... [more]
Q3EC70_ARATH6.514e-4075.70Putative uncharacterized protein At2g04039.2 OS=Ar... [more]
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BLAST of Pisum_sativum_v1_Contig2724 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT2G04039.25.663e-4275.70| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT2G04039.15.663e-4275.70| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT2G04039.32.560e-1874.58| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021374Protein of unknown function DUF2996PFAMPF11210DUF2996coord: 32..140
score: 3.7
NoneNo IPR availableSEGsegsegcoord: 3..36
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig2724 ID=Pisum_sativum_v1_Contig2724; Name=Pisum_sativum_v1_Contig2724; organism=Pisum sativum; type=contig; length=500bp
ACAGGAGAATATTGAACTTTATGCTACATCATTTGTAAACAAAAAGAAAA
TTCATTTTTGATGAATCAATCTTTCCATACAGGAATAATCCCCTGTGCTG
CCAAACGTTTTTCAACCCAAAAGACTATGTGTTTTGAAGTGATTTTCTTC
TCATCAATGAGAAACGGTTCAACCGTGCTTGCTCCTGAGTTATAAGATGA
CAGTGAAAACCCCTTTGGACCAGTAATTCCTGTGGGAAAAAAGGCCCAAA
ATGAATAGGGATTGCCTTTTTTCAGAAATGAACCTTCCAACTTATTGTCC
TGAAAAACCAACTCAATATCAGAGAGATCCTTATTGGATTCCAAAATTGT
TTTCAACGAAGGAATCACATCCTCTTCCATCATCTGAGGTAAAGGCTTAA
CCGGAGCTTTAGCAGGTGGAGCCTTCTTCCCTGTTGCTGCTTTTGGAGCT
GCTGCTGCTGCTGCCTTTACCTCCCCCTTTGTTTCAGCAGTAGCTGATGT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR021374DUF2996