Pisum_sativum_v1_Contig825

Contig Overview
NamePisum_sativum_v1_Contig825
Unique NamePisum_sativum_v1_Contig825
Typecontig
OrganismPisum sativum (pea)
Sequence length777
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FG533646FG533646Pisum sativumEST
FG528747FG528747Pisum sativumEST


Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
FG533646ESTFG533646:1..692 +
FG528747ESTFG528747:444..777 +
Homology
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BLAST of Pisum_sativum_v1_Contig825 vs. TrEMBL
Match: B9RVT3_RICCO (Homeobox protein, putative OS=Ricinus communis GN=RCOM_1172170 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.085e-10
Identity = 67/222 (30.18%), Postives = 94/222 (42.34%), Query Frame = 3 
Query:    3 GSNHSHGQRSQGRVAXXXXXXXXXXXXXXXXXIGKLHGWKG-TPYXXXXXXXXXXXXXXXKPAAKMNVINDERDTTKDIMEKTLI--FVREVINEDETEAN---VLNGSNSERSDYEGGLCRATGDECDYLLDNNNDGYRGGFSGKSENLIEQSHYN-XXXXXXXXXXXXXXXXXXXGQADLNVPDYIIGGDSNAGYSREENAEKTEGPD-GVGSTSFDCSD 644
            G +H+ G  S+ R                    G++  WKG +                 KP  +   +  + +  K+I+ + +     RE  N DET        N S+SERS+Y+    +ATGDE D   D   D Y GGF+GKS++L+E S YN                     Q DL+V  Y I GDSN    R+ + E+   PD G GS+S D SD
Sbjct: 1567 GRSHTSGTNSRSRAGSSRSESGKRSLASNNNRSGQVLSWKGQSRARGGRKRGRRSVRSRQKPVKRAVDVAAQTNVAKEIIYEKVPTKLEREDWNIDETRFQSRIAENLSSSERSEYDDENGQATGDEYD---DLPVDDYTGGFNGKSDDLLEGSDYNMDPNEEEDDEDDDEADLDEDDQGDLDVEGY-INGDSNDDGIRDGDGEQNGDPDEGTGSSSSDFSD 1784
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig825 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
B9RVT3_RICCO4.085e-1030.18Homeobox protein, putative OS=Ricinus communis GN=... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 16..32
score: NAcoord: 45..59
score: NAcoord: 152..170
score
NoneNo IPR availableSEGsegsegcoord: 14..41
score: NAcoord: 52..65
score: NAcoord: 78..97
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig825 ID=Pisum_sativum_v1_Contig825; Name=Pisum_sativum_v1_Contig825; organism=Pisum sativum; type=contig; length=777bp
AAGGCAGCAACCACTCTCATGGTCAAAGATCACAGGGAAGAGTTGCTAGT
TCAAGACCCACTTCCAGAAAGAGAAGCACTACATCCAACAGCAGGAGAAT
AGGAAAATTACATGGATGGAAAGGGACACCGTACAGACAAGGACGCGTTC
GTGGTCGGAGGAGCATTAGAAGCAGGCAGAAACCAGCAGCCAAGATGAAT
GTGATTAATGATGAGAGAGATACCACAAAAGACATCATGGAGAAAACACT
AATCTTTGTCAGAGAGGTAATTAATGAAGACGAAACAGAAGCCAATGTTC
TAAATGGTAGCAATTCGGAAAGATCAGACTATGAAGGTGGTCTTTGTCGA
GCAACAGGAGATGAGTGTGATTATTTGTTAGATAATAACAATGATGGATA
TCGGGGTGGATTTAGTGGGAAATCTGAGAATCTAATTGAACAGAGCCACT
ATAATGTAGATGATGAGGAAGATGTGGATATGGATGATGATGTCGATGAT
GACATCGAAGATGGGCAGGCGGATCTTAACGTTCCAGATTATATAATTGG
CGGGGACTCAAATGCAGGGTACAGTAGAGAAGAAAATGCAGAGAAAACTG
AGGGTCCAGATGGTGTTGGGTCTACATCATTTGATTGCAGTGATTAAATG
TAGCACATAATGTATGTAGCATAAAGTTGTAATTTTATTTAGTAGTTATG
TAGGAATAGGCCAAATATCAGGTGCTTGAATGTGAATGATGCAAAATTAT
GAAAGAAAATTCGTCTCTTATGTTTGT
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