GT624551
EST Overview
Unigenes
This EST is part of the following unigenes:
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT624551 vs. TrEMBL
Match: C6TFG3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.450e-31 Identity = 60/76 (78.95%), Postives = 69/76 (90.79%), Query Frame = 2 Query: 2 DHGIQSVQPVLPEFNSPNFSFGGSMELMAVPKRKVSPHRRGIRNGPKALKPVPVLVLCKGCGRVRLPHFYCCSGKP 229 D G++S QPVLPEF+ P+FS+G SMELMAVPKRKVSPH+RGIRNGPKALKP+PV+VLCK CGR RLPHF+CC GKP Sbjct: 39 DLGVRSPQPVLPEFSPPSFSYGSSMELMAVPKRKVSPHKRGIRNGPKALKPIPVIVLCKSCGRARLPHFFCCGGKP 114
BLAST of GT624551 vs. TrEMBL
Match: B9HIA0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_820493 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 7.705e-25 Identity = 49/61 (80.33%), Postives = 56/61 (91.80%), Query Frame = 2 Query: 41 FNSPNFSFGGSMELMAVPKRKVSPHRRGIRNGPKALKPVPVLVLCKGCGRVRLPHFYCCSG 223 F P FSFGGSMELMAVPKRKV+PH+RGIRNGPKALKP+PV++ CK CG+V+LPHFYCCSG Sbjct: 68 FGLPGFSFGGSMELMAVPKRKVTPHKRGIRNGPKALKPIPVIIRCKSCGQVKLPHFYCCSG 128
BLAST of GT624551 vs. TrEMBL
Match: B6EV28_POPAL (Ribosomal protein L32 OS=Populus alba GN=rpl32 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 7.705e-25 Identity = 49/61 (80.33%), Postives = 56/61 (91.80%), Query Frame = 2 Query: 41 FNSPNFSFGGSMELMAVPKRKVSPHRRGIRNGPKALKPVPVLVLCKGCGRVRLPHFYCCSG 223 F P FSFGGSMELMAVPKRKV+PH+RGIRNGPKALKP+PV++ CK CG+V+LPHFYCCSG Sbjct: 68 FTFPGFSFGGSMELMAVPKRKVTPHKRGIRNGPKALKPIPVIIRCKSCGQVKLPHFYCCSG 128
BLAST of GT624551 vs. TrEMBL
Match: B9HXW1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_659270 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.314e-24 Identity = 55/89 (61.80%), Postives = 64/89 (71.91%), Query Frame = 2 Query: 2 DHGIQSVQPVLPEFNS---------------PNFSFGGSMELMAVPKRKVSPHRRGIRNGPKALKPVPVLVLCKGCGRVRLPHFYCCSG 223 + I S Q LPEF++ P FSFGGSMELMAVPKRKV+PH+RGIRNGPKALKP PV++ CK CG+V+LPHFYCCSG Sbjct: 40 ESSIASPQFTLPEFDANQDTSNNSSDFGFTFPGFSFGGSMELMAVPKRKVTPHKRGIRNGPKALKPTPVIIRCKSCGQVKLPHFYCCSG 128
BLAST of GT624551 vs. TrEMBL
Match: B9S906_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0837620 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 8.519e-24 Identity = 54/93 (58.06%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 2 DHGIQSVQPVLPEFNS------------------PNFSFGGSMELMAVPKRKVSPHRRGIRNGPKALKPVPVLVLCKGCGRVRLPHFYCCSGK 226 ++ I Q VLPEFN P+FSFGGSM+LMAVPK+KVS H+RGIRNGPKALKP PV++ C+ CGRV+LPHFYCCSG+ Sbjct: 39 NNAIAPPQMVLPEFNPNHDNSNSSYDNNLEFGFLPSFSFGGSMDLMAVPKKKVSRHKRGIRNGPKALKPTPVIIRCRSCGRVKLPHFYCCSGE 131
BLAST of GT624551 vs. TrEMBL
Match: D7KQM2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_472732 PE=4 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.113e-23 Identity = 52/90 (57.78%), Postives = 64/90 (71.11%), Query Frame = 2 Query: 2 DHGIQSVQPVLPEFNS---------------PNFSFGGSMELMAVPKRKVSPHRRGIRNGPKALKPVPVLVLCKGCGRVRLPHFYCCSGK 226 D I PVLPEF+ P+F+F GSMELMAVPK+K+S H+RGIRNGPKALKPVPV++ C+ CGRV+LPHF+CCSG+ Sbjct: 39 DRPISMPPPVLPEFDQNQPGLIDEKSFGFGLPSFAFNGSMELMAVPKKKISKHKRGIRNGPKALKPVPVIIRCRSCGRVKLPHFFCCSGE 128
BLAST of GT624551 vs. TrEMBL
Match: Q944L5_ARATH (At1g26740/T24P13_11 OS=Arabidopsis thaliana GN=At1g26740 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 9.419e-23 Identity = 45/62 (72.58%), Postives = 56/62 (90.32%), Query Frame = 2 Query: 41 FNSPNFSFGGSMELMAVPKRKVSPHRRGIRNGPKALKPVPVLVLCKGCGRVRLPHFYCCSGK 226 F P+F+F GSMELMAVPK+K+S H+RGIRNGPKALKPVPV++ C+ CGRV+LPHF+CCSG+ Sbjct: 67 FGLPSFAFNGSMELMAVPKKKISKHKRGIRNGPKALKPVPVIIRCRSCGRVKLPHFFCCSGE 128
BLAST of GT624551 vs. TrEMBL
Match: Q8LG83_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.230e-22 Identity = 45/62 (72.58%), Postives = 55/62 (88.71%), Query Frame = 2 Query: 41 FNSPNFSFGGSMELMAVPKRKVSPHRRGIRNGPKALKPVPVLVLCKGCGRVRLPHFYCCSGK 226 F P F+F GSMELMAVPK+K+S H+RGIRNGPKALKPVPV++ C+ CGRV+LPHF+CCSG+ Sbjct: 67 FGLPRFAFNGSMELMAVPKKKISKHKRGIRNGPKALKPVPVIIRCRSCGRVKLPHFFCCSGE 128
BLAST of GT624551 vs. TrEMBL
Match: D7KX19_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_676457 PE=4 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.320e-21 Identity = 45/62 (72.58%), Postives = 53/62 (85.48%), Query Frame = 2 Query: 41 FNSPNFSFGGSMELMAVPKRKVSPHRRGIRNGPKALKPVPVLVLCKGCGRVRLPHFYCCSGK 226 F P FGGSMELMAVPK+K+S H+RGIRNGPKALKP PV++ C+ CGRV+LPHFYCCSG+ Sbjct: 68 FCFPISFFGGSMELMAVPKKKISKHKRGIRNGPKALKPTPVIIRCRSCGRVKLPHFYCCSGE 129
BLAST of GT624551 vs. TrEMBL
Match: A9NSJ5_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.273e-19 Identity = 44/65 (67.69%), Postives = 54/65 (83.08%), Query Frame = 2 Query: 35 PEFNSPNFSFG--GSMELMAVPKRKVSPHRRGIRNGPKALKPVPVLVLCKGCGRVRLPHFYCCSG 223 P+ S FG GSM+LMAVPKRKV+PHR+GIRNGPKALKP P+++ CK CGRV+LPHF+CC+G Sbjct: 9 PQQESGMEEFGPVGSMQLMAVPKRKVTPHRKGIRNGPKALKPAPLIMRCKSCGRVKLPHFFCCTG 73
BLAST of GT624551 vs. TAIR peptide
Match: AT1G26740.1 (| Symbols: | Ribosomal L32p protein family | chr1:9245280-9246555 REVERSE LENGTH=134) HSP 1 Score: 109.768 bits (273), Expect = 4.458e-25 Identity = 45/62 (72.58%), Postives = 56/62 (90.32%), Query Frame = 2 Query: 41 FNSPNFSFGGSMELMAVPKRKVSPHRRGIRNGPKALKPVPVLVLCKGCGRVRLPHFYCCSGK 226 F P+F+F GSMELMAVPK+K+S H+RGIRNGPKALKPVPV++ C+ CGRV+LPHF+CCSG+ Sbjct: 67 FGLPSFAFNGSMELMAVPKKKISKHKRGIRNGPKALKPVPVIIRCRSCGRVKLPHFFCCSGE 128
BLAST of GT624551 vs. TAIR peptide
Match: AT1G69485.1 (| Symbols: | Ribosomal L32p protein family | chr1:26118533-26119342 REVERSE LENGTH=63) HSP 1 Score: 94.7449 bits (234), Expect = 1.484e-20 Identity = 38/51 (74.51%), Postives = 46/51 (90.20%), Query Frame = 2 Query: 74 MELMAVPKRKVSPHRRGIRNGPKALKPVPVLVLCKGCGRVRLPHFYCCSGK 226 MELMAVPK+K+S H+RGIRNGPKA KP PV++ C+ CGRV+LPHFYCCSG+ Sbjct: 1 MELMAVPKKKISKHKRGIRNGPKAFKPTPVIIRCRSCGRVKLPHFYCCSGE 51 The following BLAST results are available for this feature:
BLAST of GT624551 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT624551 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT624551 ID=GT624551; Name=GT624551; organism=Lens culinaris; type=EST; length=383bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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