GT627577

EST Overview
NameGT627577
Unique NameGT627577
TypeEST
OrganismLens culinaris (lentil)
Sequence length474
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of GT627577 vs. TrEMBL
Match: B7FHB0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.016e-18
Identity = 39/43 (90.70%), Postives = 43/43 (100.00%), Query Frame = 2
Query:    2 WKNRQDLKVEDAGIAVLFGLECFAWFCAGEIVGRGFTFTGYYV 130
            WKN+QDLK+EDAGIAVLFGLEC+AWFCAG+IVGRGFTFTGYYV
Sbjct:   79 WKNKQDLKIEDAGIAVLFGLECYAWFCAGQIVGRGFTFTGYYV 121          
BLAST of GT627577 vs. TrEMBL
Match: A5AY31_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021594 PE=4 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.016e-18
Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 2
Query:    2 WKNRQDLKVEDAGIAVLFGLECFAWFCAGEIVGRGFTFTGYYV 130
            WKNRQ++KVEDAGIA LFGLECFAWFCAGEIVGRGFTFTGYYV
Sbjct:   80 WKNRQEMKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGYYV 122          
BLAST of GT627577 vs. TrEMBL
Match: A5AHC7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001728 PE=4 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.178e-17
Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 2
Query:    2 WKNRQDLKVEDAGIAVLFGLECFAWFCAGEIVGRGFTFTGYYV 130
            WKNRQ+LKVEDAGIA LFGLEC+AWFCAGEIVGRGFTFTGYYV
Sbjct:   80 WKNRQELKVEDAGIAALFGLECYAWFCAGEIVGRGFTFTGYYV 122          
BLAST of GT627577 vs. TrEMBL
Match: C6SYF3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.538e-17
Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 2
Query:    2 WKNRQDLKVEDAGIAVLFGLECFAWFCAGEIVGRGFTFTGYYV 130
            WKNR++LKVEDAGIA LFGLECFAWFCAGEIVGRGFTFTGYYV
Sbjct:   80 WKNRKELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGYYV 122          
BLAST of GT627577 vs. TrEMBL
Match: A9P8J3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_813941 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.538e-17
Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 2
Query:    2 WKNRQDLKVEDAGIAVLFGLECFAWFCAGEIVGRGFTFTGYYV 130
            WKNR++LKVEDAGIA LFGLECFAWFCAGEIVGRGFTFTGYYV
Sbjct:   80 WKNRKELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGYYV 122          
BLAST of GT627577 vs. TrEMBL
Match: A9PAP2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_835756 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.009e-17
Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 2
Query:    2 WKNRQDLKVEDAGIAVLFGLECFAWFCAGEIVGRGFTFTGYYV 130
            WK+RQ+LKVEDAGIA LFGLECFAWFCAGEIVGRGFTFTGYYV
Sbjct:   80 WKHRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGYYV 122          
BLAST of GT627577 vs. TrEMBL
Match: D7U030_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016886001 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.426e-17
Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 2
Query:    2 WKNRQDLKVEDAGIAVLFGLECFAWFCAGEIVGRGFTFTGYYV 130
            WKNRQ+LKVEDAGIA LFGLEC+AWFC GEIVGRGFTFTGYYV
Sbjct:   80 WKNRQELKVEDAGIAALFGLECYAWFCGGEIVGRGFTFTGYYV 122          
BLAST of GT627577 vs. TrEMBL
Match: B9RKB8_RICCO (Hydrogen-transporting ATP synthase, rotational mechanism, putative OS=Ricinus communis GN=RCOM_1048140 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.426e-17
Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 2
Query:    2 WKNRQDLKVEDAGIAVLFGLECFAWFCAGEIVGRGFTFTGYY 127
            WKNRQ+LKVEDAGIA LFGLECFAW+CAGEIVGRGFTFTGYY
Sbjct:   80 WKNRQELKVEDAGIAALFGLECFAWYCAGEIVGRGFTFTGYY 121          
BLAST of GT627577 vs. TrEMBL
Match: A9PBU4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_653926 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.475e-17
Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 2
Query:    2 WKNRQDLKVEDAGIAVLFGLECFAWFCAGEIVGRGFTFTGYYV 130
            WK+RQ+LKVEDAGIA LFGLECFAW+CAGEIVGRGFTFTGYYV
Sbjct:   80 WKHRQELKVEDAGIAALFGLECFAWYCAGEIVGRGFTFTGYYV 122          
BLAST of GT627577 vs. TrEMBL
Match: Q9STR3_ARATH (Copia-like retroelement pol polyprotein OS=Arabidopsis thaliana GN=AT4g26210 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.844e-17
Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 2
Query:    2 WKNRQDLKVEDAGIAVLFGLECFAWFCAGEIVGRGFTFTGYY 127
            WKNR DLKVEDAGIA LFGLECFAW+CAGEIVGRGFTFTGYY
Sbjct:   80 WKNRADLKVEDAGIAALFGLECFAWYCAGEIVGRGFTFTGYY 121          
BLAST of GT627577 vs. TAIR peptide
Match: AT4G26210.2 (| Symbols: | Mitochondrial ATP synthase subunit G protein | chr4:13282370-13283118 FORWARD LENGTH=122)

HSP 1 Score: 90.5077 bits (223), Expect = 4.607e-19
Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 2
Query:    2 WKNRQDLKVEDAGIAVLFGLECFAWFCAGEIVGRGFTFTGYY 127
            WKNR DLKVEDAGIA LFGLECFAW+CAGEIVGRGFTFTGYY
Sbjct:   80 WKNRADLKVEDAGIAALFGLECFAWYCAGEIVGRGFTFTGYY 121          
BLAST of GT627577 vs. TAIR peptide
Match: AT4G26210.1 (| Symbols: | Mitochondrial ATP synthase subunit G protein | chr4:13282370-13283118 FORWARD LENGTH=122)

HSP 1 Score: 90.5077 bits (223), Expect = 4.607e-19
Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 2
Query:    2 WKNRQDLKVEDAGIAVLFGLECFAWFCAGEIVGRGFTFTGYY 127
            WKNR DLKVEDAGIA LFGLECFAW+CAGEIVGRGFTFTGYY
Sbjct:   80 WKNRADLKVEDAGIAALFGLECFAWYCAGEIVGRGFTFTGYY 121          
BLAST of GT627577 vs. TAIR peptide
Match: AT4G29480.1 (| Symbols: | Mitochondrial ATP synthase subunit G protein | chr4:14486265-14487257 REVERSE LENGTH=122)

HSP 1 Score: 86.6557 bits (213), Expect = 6.652e-18
Identity = 37/42 (88.10%), Postives = 38/42 (90.48%), Query Frame = 2
Query:    2 WKNRQDLKVEDAGIAVLFGLECFAWFCAGEIVGRGFTFTGYY 127
            WKNR  LKVEDAGIA LFGLECFAW+CAGEI GRGFTFTGYY
Sbjct:   80 WKNRSGLKVEDAGIAALFGLECFAWYCAGEIAGRGFTFTGYY 121          
BLAST of GT627577 vs. TAIR peptide
Match: AT2G19680.2 (| Symbols: | Mitochondrial ATP synthase subunit G protein | chr2:8501865-8502622 FORWARD LENGTH=122)

HSP 1 Score: 85.5001 bits (210), Expect = 1.482e-17
Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 2
Query:    5 KNRQDLKVEDAGIAVLFGLECFAWFCAGEIVGRGFTFTGYY 127
            KNR +LKVEDAGIA LFGLECFAWFCAGEIVGRGFTFTGYY
Sbjct:   81 KNRANLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGYY 121          
BLAST of GT627577 vs. TAIR peptide
Match: AT2G19680.1 (| Symbols: | Mitochondrial ATP synthase subunit G protein | chr2:8501865-8502622 FORWARD LENGTH=122)

HSP 1 Score: 85.5001 bits (210), Expect = 1.482e-17
Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 2
Query:    5 KNRQDLKVEDAGIAVLFGLECFAWFCAGEIVGRGFTFTGYY 127
            KNR +LKVEDAGIA LFGLECFAWFCAGEIVGRGFTFTGYY
Sbjct:   81 KNRANLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGYY 121          
The following BLAST results are available for this feature:
BLAST of GT627577 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FHB0_MEDTR9.016e-1890.70Putative uncharacterized protein OS=Medicago trunc... [more]
A5AY31_VITVI9.016e-1893.02Putative uncharacterized protein OS=Vitis vinifera... [more]
A5AHC7_VITVI1.178e-1793.02Putative uncharacterized protein OS=Vitis vinifera... [more]
C6SYF3_SOYBN1.538e-1793.02Putative uncharacterized protein OS=Glycine max PE... [more]
A9P8J3_POPTR1.538e-1793.02Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PAP2_POPTR2.009e-1793.02Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7U030_VITVI3.426e-1790.70Whole genome shotgun sequence of line PN40024, sca... [more]
B9RKB8_RICCO3.426e-1792.86Hydrogen-transporting ATP synthase, rotational mec... [more]
A9PBU4_POPTR4.475e-1790.70Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q9STR3_ARATH5.844e-1792.86Copia-like retroelement pol polyprotein OS=Arabido... [more]
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BLAST of GT627577 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G26210.24.607e-1992.86| Symbols: | Mitochondrial ATP synthase subunit G... [more]
AT4G26210.14.607e-1992.86| Symbols: | Mitochondrial ATP synthase subunit G... [more]
AT4G29480.16.652e-1888.10| Symbols: | Mitochondrial ATP synthase subunit G... [more]
AT2G19680.21.482e-1792.68| Symbols: | Mitochondrial ATP synthase subunit G... [more]
AT2G19680.11.482e-1792.68| Symbols: | Mitochondrial ATP synthase subunit G... [more]
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Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT627577 ID=GT627577; Name=GT627577; organism=Lens culinaris; type=EST; length=474bp
CTGGAAGAACAGGCAAGATTTAAAGGTTGAAGATGCAGGTATTGCTGTTT
TGTTTGGCCTGGAATGCTTTGCATGGTTTTGCGCCGGCGAGATTGTTGGA
AGAGGATTTACTTTCACAGGTTACTATGTCTAACAGTAATCATTTATTAA
TGTAGTAATGATTTAGTGCGGCTCTATACTCCTAAGTCCAGGAGTAATGT
CATTTATAACATTAAGTTGATGTTGATTTTGGGCATTCTACAAGCAATTT
GTCATTCTTTGAGGAAAAAAAAGGTTACAAAACTAGTGGTAATAAGCCTC
AGTAACCTCTTGTATTTGAAGCGGGATGAACTATGTGCTGTTCTCTTATC
ATTTGTTAGAAAGCTAGTGGCTGGTTGTTCTCATATCATGTTAGAAAGCT
AGCGGCGGCAAACGACCATAATTATTTTCCTGTGATTTATAATCATTTTT
ATATCCATGTTTTTAGCTTTGCAT
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