GT620578
EST Overview
Unigenes
This EST is part of the following unigenes:
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT620578 vs. TrEMBL
Match: C6SZ30_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 8.925e-36 Identity = 78/129 (60.47%), Postives = 89/129 (68.99%), Query Frame = 2 Query: 59 MASLNSHHF----SXXXXXXXXXXXXXHPASTSVH-QP----RELLYEEKNKLGSIPPSCHSKCHECHPCMAVQVPSVPSHDSLPPQLTKASPMEKLVAPSVQGSANNRYSNYKPLGWKCHCGDHFFNP 418 MASLNS+H+ S AS S H QP RELL+EEKN+LGSIPPSCH+KC++CHPCMAVQVP++PSHDS PP LTK + M + PS NRYSNYKPLGWKCHCGDHFFNP Sbjct: 1 MASLNSYHYYTNTSLLIILLLHNLFSLSLASASNHPQPAISTRELLFEEKNRLGSIPPSCHNKCNDCHPCMAVQVPTLPSHDSNPPDLTKTAAMATFLNPS--SPQGNRYSNYKPLGWKCHCGDHFFNP 127
BLAST of GT620578 vs. TrEMBL
Match: B9T3Q4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0038230 PE=4 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 9.890e-27 Identity = 53/83 (63.86%), Postives = 64/83 (77.11%), Query Frame = 2 Query: 170 YEEKNKLGSIPPSCHSKCHECHPCMAVQVPSVPSHDSLPPQLTKASPMEKLVAPSVQGSANNRYSNYKPLGWKCHCGDHFFNP 418 +E+K +LGS PPSCH+KC+ CHPCMAVQVP+VPSH+ + P L K++ E L P G NRYSNYKPLGWKCHCG HF+NP Sbjct: 9 FEDKTRLGSTPPSCHNKCNGCHPCMAVQVPTVPSHNRVEPGLAKSATTEFLFDPYPSG---NRYSNYKPLGWKCHCGGHFYNP 88
BLAST of GT620578 vs. TrEMBL
Match: B9HFE6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_562574 PE=4 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.023e-23 Identity = 51/84 (60.71%), Postives = 62/84 (73.81%), Query Frame = 2 Query: 170 YEEKNKLGSIPPSCHSKCHECHPCMAVQVPSVPSHD-SLPPQLTKASPMEKLVAPSVQGSANNRYSNYKPLGWKCHCGDHFFNP 418 +EEK +LGS PPSCH+KC+ CHPCMAVQVP++P+ + P TK S ++ P G NNRYSNYKPLGWKC CGDHF+NP Sbjct: 43 FEEKARLGSTPPSCHNKCNGCHPCMAVQVPTLPNQNRPAQPVSTKTSIIDPFFDPYPAG--NNRYSNYKPLGWKCRCGDHFYNP 124
BLAST of GT620578 vs. TrEMBL
Match: D7M2V8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_487859 PE=4 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.359e-20 Identity = 43/92 (46.74%), Postives = 63/92 (68.48%), Query Frame = 2 Query: 149 HQPRELLYEEKNKLGSIPPSCHSKCHECHPCMAVQVPSVPSHDSLPPQLTKASPMEK--LVAPSVQGSANNRYSNYKPLGWKCHCGDHFFNP 418 + P+ L E+K +LGS PPSCH++C+ CHPCMA+QVP++P+ + T+ +P + PS + ++YSNYKP+GWKCHC HF+NP Sbjct: 31 NSPQVALIEDKARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRS----RFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 118
BLAST of GT620578 vs. TrEMBL
Match: B9H4S2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1077355 PE=4 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.966e-20 Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 2 Query: 155 PRELLYEEKNKLGSIPPSCHSKCHECHPCMAVQVPSVPSHDSLPPQL--TKASPMEKLVAPSVQGSANNRYSNYKPLGWKCHCGDHFFNP 418 P+ + +EEK +LGS PPSCH+KC+ CHPC+AVQVP++PS + P Q+ K S +++ A NR+ +Y+PLGWKC C DHF+NP Sbjct: 41 PQGIAFEEKARLGSTPPSCHNKCNGCHPCIAVQVPALPSQNE-PVQMGSAKTSSIDEFFD---SYPAGNRFPDYRPLGWKCRCADHFYNP 126
BLAST of GT620578 vs. TrEMBL
Match: Q4ABN9_BRARP (80A08_28 OS=Brassica rapa subsp. pekinensis GN=80A08_28 PE=4 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.407e-19 Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 2 Query: 149 HQPRELLYEEKNKLGSIPPSCHSKCHECHPCMAVQVPSVPSHDSLPPQLTKASPMEK--LVAPSVQGSANNRYSNYKPLGWKCHCGDHFFNP 418 + P+ L E+K +LGS PPSCH+ C+ CHPCM QVP++PS + T+ P + PS + ++YSNYKP+GWKCHC HF+NP Sbjct: 33 NSPQVALVEDKARLGSTPPSCHNSCNGCHPCMPTQVPTLPSRS----RFTRVDPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 120
BLAST of GT620578 vs. TrEMBL
Match: D5ABF8_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 8.392e-18 Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 173 EEKNKLGSIPPSCHSKCHECHPCMAVQVPSVPSHDSLPPQLTKASPMEKLVAPSVQGSANNRYSNYKPLGWKCHCGDHFFNP 418 E+ +LGSIPPSC +KC+ C+PC A+QVP++P+HD Q+ K S PS A+ +Y+NYKP+GWKC CG+ FNP Sbjct: 39 EDMTRLGSIPPSCRNKCNACNPCKAIQVPTLPNHD----QVHKVSQ-----RPSPSTEASKKYTNYKPIGWKCKCGNRLFNP 111
BLAST of GT620578 vs. TrEMBL
Match: C5XYC0_SORBI (Putative uncharacterized protein Sb04g027410 OS=Sorghum bicolor GN=Sb04g027410 PE=4 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.481e-14 Identity = 39/93 (41.94%), Postives = 57/93 (61.29%), Query Frame = 2 Query: 140 TSVHQPRELLYEEKNKLGSIPPSCHSKCHECHPCMAVQVPSVPSHDSLPPQLTKASPMEKLVAPSVQGSANNRYSNYKPLGWKCHCGDHFFNP 418 T+ P + L E+K++LGS PPSCH++C C+PCM VQV + P L +A+ ++ +V + +RYSNYKPLGWKC C ++P Sbjct: 29 TATFSPSQNLAEDKSRLGSTPPSCHNRCSACNPCMPVQVTTAPG-------LGRAA---RVADDTVTVAGFSRYSNYKPLGWKCRCDGRLYDP 111
BLAST of GT620578 vs. TrEMBL
Match: D7TG21_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_391.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00006628001 PE=4 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.765e-13 Identity = 34/55 (61.82%), Postives = 41/55 (74.55%), Query Frame = 2 Query: 158 RELLYEEKNKLGSIPPSCHSKCHECHPCMAVQVPSVPSHDSLPPQLTKASPMEKL 322 R LL+EEK +LGS PPSCH+KC+ECHPCMAVQVP++PSH LT P + L Sbjct: 61 RGLLFEEKTRLGSTPPSCHNKCNECHPCMAVQVPTLPSHSGPRLGLTATGPWDSL 115
BLAST of GT620578 vs. TrEMBL
Match: B6UFK7_MAIZE (Putative uncharacterized protein OS=Zea mays PE=4 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 6.224e-13 Identity = 40/95 (42.11%), Postives = 58/95 (61.05%), Query Frame = 2 Query: 134 ASTSVHQPRELLYEEKNKLGSIPPSCHSKCHECHPCMAVQVPSVPSHDSLPPQLTKASPMEKLVAPSVQGSANNRYSNYKPLGWKCHCGDHFFNP 418 A+ S Q +E L E+K++LGS PP C ++C C+PCM VQV + P+ L +A+ + A +V G +RYS+YKPLGWKC C ++P Sbjct: 29 ATFSPSQAQENLAEDKSRLGSTPPICRNRCSACNPCMPVQVTTAPA------GLGRAARVTDADADAVAGF--SRYSDYKPLGWKCGCDGRLYDP 115
BLAST of GT620578 vs. SwissProt
Match: EPFL1_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana GN=EPFL1 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.028e-21 Identity = 43/90 (47.78%), Postives = 62/90 (68.89%), Query Frame = 2 Query: 155 PRELLYEEKNKLGSIPPSCHSKCHECHPCMAVQVPSVPSHDSLPPQLTKASPMEK--LVAPSVQGSANNRYSNYKPLGWKCHCGDHFFNP 418 P+ L E+K +LGS PPSCH++C+ CHPCMA+QVP++P+ + T+ +P + PS + ++YSNYKP+GWKCHC HF+NP Sbjct: 37 PQVALIEDKARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRS----RFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122
BLAST of GT620578 vs. SwissProt
Match: EPFL3_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana GN=EPFL3 PE=3 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 1.781e-9 Identity = 27/83 (32.53%), Postives = 42/83 (50.60%), Query Frame = 2 Query: 149 HQPRELLYEEKNKLGSIPPSCHSKCHECHPCMAVQVPSVPSHDSLPPQLTKASPMEKLVAPSVQGSANNRYSNYKPLGWKCHC 397 ++ +E + + + ++GS PPSC KC+ C PC A+Q P++ S L P Y+NY+P GW+CHC Sbjct: 44 NENKEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFPTISSIPHLSP----------------------HYANYQPEGWRCHC 104
BLAST of GT620578 vs. SwissProt
Match: EPFL2_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana GN=EPFL2 PE=2 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 5.729e-8 Identity = 27/78 (34.62%), Postives = 41/78 (52.56%), Query Frame = 2 Query: 188 LGSIPPSCHS-KCHECHPCMAVQVPSVPSHDSLPPQLTKASPMEKLVAPSVQGSANNRYSNYKPLGWKCHCGDHFFNP 418 +GS PP C +C C C A+QVP+ P P T +S + + + + + +NYKP+ WKC CG+ +NP Sbjct: 53 IGSRPPRCERVRCRSCGHCEAIQVPTNPQTKLHSPLTTSSSSSSETI--HLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128
BLAST of GT620578 vs. TAIR peptide
Match: AT5G10310.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:3241666-3242127 REVERSE LENGTH=122) HSP 1 Score: 102.834 bits (255), Expect = 2.017e-22 Identity = 43/90 (47.78%), Postives = 62/90 (68.89%), Query Frame = 2 Query: 155 PRELLYEEKNKLGSIPPSCHSKCHECHPCMAVQVPSVPSHDSLPPQLTKASPMEK--LVAPSVQGSANNRYSNYKPLGWKCHCGDHFFNP 418 P+ L E+K +LGS PPSCH++C+ CHPCMA+QVP++P+ + T+ +P + PS + ++YSNYKP+GWKCHC HF+NP Sbjct: 37 PQVALIEDKARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRS----RFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122
BLAST of GT620578 vs. TAIR peptide
Match: AT3G13898.1 (| Symbols: | unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). | chr3:4584011-4584334 FORWARD LENGTH=107) HSP 1 Score: 63.1586 bits (152), Expect = 1.771e-10 Identity = 27/83 (32.53%), Postives = 42/83 (50.60%), Query Frame = 2 Query: 149 HQPRELLYEEKNKLGSIPPSCHSKCHECHPCMAVQVPSVPSHDSLPPQLTKASPMEKLVAPSVQGSANNRYSNYKPLGWKCHC 397 ++ +E + + + ++GS PPSC KC+ C PC A+Q P++ S L P Y+NY+P GW+CHC Sbjct: 44 NENKEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFPTISSIPHLSP----------------------HYANYQPEGWRCHC 104
BLAST of GT620578 vs. TAIR peptide
Match: AT4G37810.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:17780970-17781544 FORWARD LENGTH=128) HSP 1 Score: 58.151 bits (139), Expect = 5.698e-9 Identity = 27/78 (34.62%), Postives = 41/78 (52.56%), Query Frame = 2 Query: 188 LGSIPPSCHS-KCHECHPCMAVQVPSVPSHDSLPPQLTKASPMEKLVAPSVQGSANNRYSNYKPLGWKCHCGDHFFNP 418 +GS PP C +C C C A+QVP+ P P T +S + + + + + +NYKP+ WKC CG+ +NP Sbjct: 53 IGSRPPRCERVRCRSCGHCEAIQVPTNPQTKLHSPLTTSSSSSSETI--HLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128 The following BLAST results are available for this feature:
BLAST of GT620578 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT620578 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 3
BLAST of GT620578 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT620578 ID=GT620578; Name=GT620578; organism=Lens culinaris; type=EST; length=743bpback to top |