GT622645

EST Overview


Name	GT622645
Unique Name	GT622645
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	357

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT622645 vs. TrEMBL
Match: D7STF8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_55.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029801001 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.413e-18
Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 3

Query:    3 QKHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGVMI 185
            QKHL+ FEKV +T K+EA+V FKVDVCKDLS+VDELG RKVALG HVLHVG+LKH L V I
Sbjct:  273 QKHLLGFEKVFVTAKAEALVRFKVDVCKDLSIVDELGTRKVALGLHVLHVGNLKHSLNVRI 333

[Close]

BLAST of GT622645 vs. TrEMBL
Match: D7UD72_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_121.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00013328001 PE=4 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.021e-18
Identity = 45/61 (73.77%), Postives = 52/61 (85.25%), Query Frame = 3

Query:    3 QKHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGVMI 185
            QKHL+ FEKV +T K++A+V FKVDVCKDLS+VDELG RKVALG HVLHVG+LKH L V I
Sbjct:  691 QKHLLGFEKVFVTAKAKALVRFKVDVCKDLSIVDELGTRKVALGLHVLHVGNLKHSLNVRI 751

[Close]

BLAST of GT622645 vs. TrEMBL
Match: A5BC37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030325 PE=4 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.021e-18
Identity = 45/61 (73.77%), Postives = 52/61 (85.25%), Query Frame = 3

Query:    3 QKHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGVMI 185
            QKHL+ FEKV +T K++A+V FKVDVCKDLS+VDELG RKVALG HVLHVG+LKH L V I
Sbjct:  639 QKHLLGFEKVFVTAKAKALVRFKVDVCKDLSIVDELGTRKVALGLHVLHVGNLKHSLNVRI 699

[Close]

BLAST of GT622645 vs. TrEMBL
Match: D7U8Q0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_32.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022541001 PE=4 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.170e-18
Identity = 45/61 (73.77%), Postives = 51/61 (83.61%), Query Frame = 3

Query:    3 QKHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGVMI 185
            QKHL+ FEKV +T K+EA+V FKVDVCKDLS+VDELG +KVALG HVLHVG LKH L V I
Sbjct:  714 QKHLLGFEKVFVTAKAEALVRFKVDVCKDLSIVDELGTQKVALGLHVLHVGSLKHSLNVRI 774

[Close]

BLAST of GT622645 vs. TrEMBL
Match: Q76MS4_SOLLC (LEXYL2 protein (Fragment) OS=Solanum lycopersicum GN=LEXYL2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.668e-17
Identity = 43/61 (70.49%), Postives = 51/61 (83.61%), Query Frame = 3

Query:    3 QKHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGVMI 185
            QKHL+ F+K+HLT +SE VV F +DVCK LSVVDE+GNRKVALG HVLH+GDLKH L + I
Sbjct:  573 QKHLLDFQKIHLTPQSEGVVKFNLDVCKHLSVVDEVGNRKVALGLHVLHIGDLKHSLTLRI 633

[Close]

BLAST of GT622645 vs. TrEMBL
Match: Q76MS5_SOLLC (LEXYL1 protein OS=Solanum lycopersicum GN=LEXYL1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.944e-17
Identity = 44/61 (72.13%), Postives = 49/61 (80.33%), Query Frame = 3

Query:    3 QKHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGVMI 185
            +KHL+ FEKVHLT + E VV F V+VCK LSV DELGNRKVALG HVLH+GDLKH L V I
Sbjct:  710 KKHLLGFEKVHLTPQGEGVVKFNVNVCKHLSVHDELGNRKVALGPHVLHIGDLKHSLTVRI 770

[Close]

BLAST of GT622645 vs. TrEMBL
Match: Q2MCJ5_9ROSI (Xylan 1,4-beta-xylosidase OS=Populus tremula x Populus alba GN=BXL4 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.763e-17
Identity = 43/61 (70.49%), Postives = 51/61 (83.61%), Query Frame = 3

Query:    3 QKHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGVMI 185
            QKHLV FEKV L  ++++ V FKVDVCKDLSVVDELG++KVALGEHVLH+G LKH + V I
Sbjct:  697 QKHLVGFEKVFLHAQTDSHVGFKVDVCKDLSVVDELGSKKVALGEHVLHIGSLKHSMTVRI 757

[Close]

BLAST of GT622645 vs. TrEMBL
Match: B9GF88_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_171426 PE=4 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.763e-17
Identity = 43/61 (70.49%), Postives = 51/61 (83.61%), Query Frame = 3

Query:    3 QKHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGVMI 185
            QKHLV FEKV L  ++++ V FKVDVCKDLSVVDELG++KVALGEHVLH+G LKH + V I
Sbjct:  681 QKHLVGFEKVFLHAQTDSHVGFKVDVCKDLSVVDELGSKKVALGEHVLHIGSLKHSMTVRI 741

[Close]

BLAST of GT622645 vs. TrEMBL
Match: Q7X6F6_ORYSJ (OSJNBb0079B02.3 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0079B02.3 PE=4 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.729e-16
Identity = 43/60 (71.67%), Postives = 47/60 (78.33%), Query Frame = 3

Query:    6 KHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGVMI 185
            KHL+ FEKV L      VV+FKVDVCKDLSVVDELGNRKVALG H LHVGDLKH L + +
Sbjct:  706 KHLLGFEKVSLEPGQAGVVAFKVDVCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLRV 765

[Close]

BLAST of GT622645 vs. TrEMBL
Match: Q5JQX8_ORYSA (OSJNBb0003B01.27 protein OS=Oryza sativa GN=OSJNBb0003B01.27 PE=4 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.729e-16
Identity = 43/60 (71.67%), Postives = 47/60 (78.33%), Query Frame = 3

Query:    6 KHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGVMI 185
            KHL+ FEKV L      VV+FKVDVCKDLSVVDELGNRKVALG H LHVGDLKH L + +
Sbjct:  780 KHLLGFEKVSLEPGQAGVVAFKVDVCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLRV 839

[Close]

BLAST of GT622645 vs. SwissProt
Match: XYL2_MEDVA (Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago varia GN=Xyl2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.535e-24
Identity = 53/61 (86.89%), Postives = 58/61 (95.08%), Query Frame = 3

Query:    3 QKHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGVMI 185
            QKHL+AFEKV LTGKSEA+VSFKVDVCKDL +VDELGNRKVALG+H+LHVGDLKHPL VMI
Sbjct:  714 QKHLLAFEKVLLTGKSEALVSFKVDVCKDLGLVDELGNRKVALGKHMLHVGDLKHPLSVMI 774

[Close]

BLAST of GT622645 vs. SwissProt
Match: XYL1_MEDVA (Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago varia GN=Xyl1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.282e-20
Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 3

Query:    3 QKHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGVMI 185
            QKHL+ FEKV L GKSE +V FKVDVC DLSVVDELGNRKV LG+H+LHVG+LKH L V I
Sbjct:  714 QKHLLGFEKVQLAGKSEGMVRFKVDVCNDLSVVDELGNRKVPLGDHMLHVGNLKHSLSVRI 774

[Close]

BLAST of GT622645 vs. SwissProt
Match: BXL4_ARATH (Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL4 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.944e-18
Identity = 40/61 (65.57%), Postives = 50/61 (81.97%), Query Frame = 3

Query:    3 QKHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGVMI 185
            +KHLV FEK+ L  + EAVV FKV++CKDLSVVDE+G RK+ LG+H+LHVGDLKH L + I
Sbjct:  724 RKHLVGFEKIRLGKREEAVVRFKVEICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI 784

[Close]

BLAST of GT622645 vs. SwissProt
Match: BXL3_ARATH (Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.116e-15
Identity = 37/60 (61.67%), Postives = 44/60 (73.33%), Query Frame = 3

Query:    6 KHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGVMI 185
            K L+ FEK+ L    EAVV F V+VCKDLSVVDE G RK+ALG H+LHVG LKH L + +
Sbjct:  714 KQLLGFEKIRLGKSEEAVVRFNVNVCKDLSVVDETGKRKIALGHHLLHVGSLKHSLNISV 773

[Close]

BLAST of GT622645 vs. SwissProt
Match: BXL1_ARATH (Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.294e-12
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 3

Query:    6 KHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPL 173
            K L+AFEKVH+   ++  V   VD CK L VVDE G R++ +GEH LH+GDLKH +
Sbjct:  713 KQLIAFEKVHVMAGAKQTVQVDVDACKHLGVVDEYGKRRIPMGEHKLHIGDLKHTI 768

[Close]

BLAST of GT622645 vs. SwissProt
Match: BXL2_ARATH (Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana GN=BXL2 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 4.195e-9
Identity = 26/59 (44.07%), Postives = 39/59 (66.10%), Query Frame = 3

Query:    3 QKHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGV 179
            +K LVAFE+VH+    +  V   + VCK LSVVD  GNR++ +G+H +H+GD  H + +
Sbjct:  700 KKQLVAFERVHVAVGEKKRVQVNIHVCKYLSVVDRAGNRRIPIGDHGIHIGDESHTVSL 758

[Close]

BLAST of GT622645 vs. SwissProt
Match: XYNB_PRUPE (Putative beta-D-xylosidase (Fragment) OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 5.479e-9
Identity = 28/54 (51.85%), Postives = 34/54 (62.96%), Query Frame = 3

Query:    6 KHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKH 167
            K L+ F K+H+   SE  V   V VCK LSVVD  G R++ LGEH L +GDL H
Sbjct:  395 KQLMGFHKIHIATGSEKRVRIAVHVCKHLSVVDRFGIRRIPLGEHKLQIGDLSH 448

[Close]

BLAST of GT622645 vs. SwissProt
Match: BXL6_ARATH (Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana GN=BXL6 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 3.551e-8
Identity = 24/59 (40.68%), Postives = 37/59 (62.71%), Query Frame = 3

Query:    3 QKHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGV 179
            +K L+ +++VH+         F +D CK LSV +++G R + LG HVL +GDL+H L V
Sbjct:  732 EKQLIGYDRVHVRSNEMMETVFVIDPCKQLSVANDVGKRVIPLGSHVLFLGDLQHSLSV 790

[Close]

BLAST of GT622645 vs. TAIR peptide
Match: AT5G64570.1 (| Symbols: XYL4, ATBXL4 | beta-D-xylosidase 4 | chr5:25810227-25813309 REVERSE LENGTH=784)

HSP 1 Score: 89.7373 bits (221), Expect = 3.807e-19
Identity = 40/61 (65.57%), Postives = 50/61 (81.97%), Query Frame = 3

Query:    3 QKHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGVMI 185
            +KHLV FEK+ L  + EAVV FKV++CKDLSVVDE+G RK+ LG+H+LHVGDLKH L + I
Sbjct:  724 RKHLVGFEKIRLGKREEAVVRFKVEICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI 784

[Close]

BLAST of GT622645 vs. TAIR peptide
Match: AT5G09700.1 (| Symbols: | Glycosyl hydrolase family protein | chr5:3003720-3005566 REVERSE LENGTH=526)

HSP 1 Score: 81.6481 bits (200), Expect = 1.037e-16
Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 3

Query:    3 QKHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGVMI 185
            +K L+ FEK+ L  K E VV FKVDVCKDL VVDE+G RK+ALG H+LHVG LKH   + +
Sbjct:  466 RKQLLGFEKIRLGKKEETVVRFKVDVCKDLGVVDEIGKRKLALGHHLLHVGSLKHSFNISV 526

[Close]

BLAST of GT622645 vs. TAIR peptide
Match: AT5G09730.1 (| Symbols: BXL3, ATBXL3, XYL3, ATBX3, BX3 | beta-xylosidase 3 | chr5:3015319-3018226 REVERSE LENGTH=773)

HSP 1 Score: 79.7221 bits (195), Expect = 3.939e-16
Identity = 37/60 (61.67%), Postives = 44/60 (73.33%), Query Frame = 3

Query:    6 KHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGVMI 185
            K L+ FEK+ L    EAVV F V+VCKDLSVVDE G RK+ALG H+LHVG LKH L + +
Sbjct:  714 KQLLGFEKIRLGKSEEAVVRFNVNVCKDLSVVDETGKRKIALGHHLLHVGSLKHSLNISV 773

[Close]

BLAST of GT622645 vs. TAIR peptide
Match: AT5G49360.1 (| Symbols: BXL1, ATBXL1 | beta-xylosidase 1 | chr5:20012179-20016659 REVERSE LENGTH=774)

HSP 1 Score: 69.707 bits (169), Expect = 4.077e-13
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 3

Query:    6 KHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPL 173
            K L+AFEKVH+   ++  V   VD CK L VVDE G R++ +GEH LH+GDLKH +
Sbjct:  713 KQLIAFEKVHVMAGAKQTVQVDVDACKHLGVVDEYGKRRIPMGEHKLHIGDLKHTI 768

[Close]

BLAST of GT622645 vs. TAIR peptide
Match: AT1G02640.1 (| Symbols: BXL2, ATBXL2 | beta-xylosidase 2 | chr1:564293-567580 FORWARD LENGTH=768)

HSP 1 Score: 60.077 bits (144), Expect = 3.230e-10
Identity = 26/59 (44.07%), Postives = 39/59 (66.10%), Query Frame = 3

Query:    3 QKHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGV 179
            +K LVAFE+VH+    +  V   + VCK LSVVD  GNR++ +G+H +H+GD  H + +
Sbjct:  700 KKQLVAFERVHVAVGEKKRVQVNIHVCKYLSVVDRAGNRRIPIGDHGIHIGDESHTVSL 758

[Close]

BLAST of GT622645 vs. TAIR peptide
Match: AT5G10560.1 (| Symbols: | Glycosyl hydrolase family protein | chr5:3336335-3339351 REVERSE LENGTH=792)

HSP 1 Score: 56.9954 bits (136), Expect = 2.734e-9
Identity = 24/59 (40.68%), Postives = 37/59 (62.71%), Query Frame = 3

Query:    3 QKHLVAFEKVHLTGKSEAVVSFKVDVCKDLSVVDELGNRKVALGEHVLHVGDLKHPLGV 179
            +K L+ +++VH+         F +D CK LSV +++G R + LG HVL +GDL+H L V
Sbjct:  732 EKQLIGYDRVHVRSNEMMETVFVIDPCKQLSVANDVGKRVIPLGSHVLFLGDLQHSLSV 790

The following BLAST results are available for this feature:

BLAST of GT622645 vs. TrEMBL
BLAST of GT622645 vs. SwissProt
BLAST of GT622645 vs. TAIR peptide

BLAST of GT622645 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7STF8_VITVI	2.413e-18	75.41	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7UD72_VITVI	7.021e-18	73.77	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5BC37_VITVI	7.021e-18	73.77	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7U8Q0_VITVI	9.170e-18	73.77	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q76MS4_SOLLC	2.668e-17	70.49	LEXYL2 protein (Fragment) OS=Solanum lycopersicum ...	[more]
Q76MS5_SOLLC	5.944e-17	72.13	LEXYL1 protein OS=Solanum lycopersicum GN=LEXYL1 P...	[more]
Q2MCJ5_9ROSI	7.763e-17	70.49	Xylan 1,4-beta-xylosidase OS=Populus tremula x Pop...	[more]
B9GF88_POPTR	7.763e-17	70.49	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
Q7X6F6_ORYSJ	1.729e-16	71.67	OSJNBb0079B02.3 protein OS=Oryza sativa subsp. jap...	[more]
Q5JQX8_ORYSA	1.729e-16	71.67	OSJNBb0003B01.27 protein OS=Oryza sativa GN=OSJNBb...	[more]

BLAST of GT622645 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 8


Match Name	E-value	Identity	Description
XYL2_MEDVA	3.535e-24	86.89	Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=M...	[more]
XYL1_MEDVA	5.282e-20	75.41	Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fra...	[more]
BXL4_ARATH	4.944e-18	65.57	Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL...	[more]
BXL3_ARATH	5.116e-15	61.67	Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL...	[more]
BXL1_ARATH	5.294e-12	53.57	Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL...	[more]
BXL2_ARATH	4.195e-9	44.07	Probable beta-D-xylosidase 2 OS=Arabidopsis thalia...	[more]
XYNB_PRUPE	5.479e-9	51.85	Putative beta-D-xylosidase (Fragment) OS=Prunus pe...	[more]
BXL6_ARATH	3.551e-8	40.68	Probable beta-D-xylosidase 6 OS=Arabidopsis thalia...	[more]

BLAST of GT622645 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT5G64570.1	3.807e-19	65.57	\| Symbols: XYL4, ATBXL4 \| beta-D-xylosidase 4 \| ch...	[more]
AT5G09700.1	1.037e-16	60.66	\| Symbols: \| Glycosyl hydrolase family protein \| ...	[more]
AT5G09730.1	3.939e-16	61.67	\| Symbols: BXL3, ATBXL3, XYL3, ATBX3, BX3 \| beta-x...	[more]
AT5G49360.1	4.077e-13	53.57	\| Symbols: BXL1, ATBXL1 \| beta-xylosidase 1 \| chr5...	[more]
AT1G02640.1	3.230e-10	44.07	\| Symbols: BXL2, ATBXL2 \| beta-xylosidase 2 \| chr1...	[more]
AT5G10560.1	2.734e-9	40.68	\| Symbols: \| Glycosyl hydrolase family protein \| ...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 14..32 score: NAcoord: 60..71 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT622645 ID=GT622645; Name=GT622645; organism=Lens culinaris; type=EST; length=357bp
CTCAGAAACACTTGGTGGCTTTTGAGAAAGTGCACTTGACAGGAAAATCA
GAAGCAGTGGTTAGTTTCAAAGTAGATGTTTGTAAGGATTTGAGTGTGGT
TGATGAACTTGGTAACAGAAAAGTAGCCTTAGGAGAACATGTGCTTCATG
TAGGAGACTTGAAGCATCCTTTAGGTGTGATGATATAAAGCAATCATCAG
TCTTTTTTTTTACATCATTGCTTTCCTTAGAAAATTTAAGGGAATCATAG
ATTGAATATAAAAGGGGAAGACTAAGAATAAGTTTGAGAGGTGGTTCTGT
AATTGAAACAAATTGCTCTCTACTTCTAAGCTTTCAAATAAAAAAATCAA
TATTAAC

Search form