GT623343

EST Overview
NameGT623343
Unique NameGT623343
TypeEST
OrganismLens culinaris (lentil)
Sequence length579
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT623343 vs. TrEMBL
Match: B9T892_RICCO (Putative uncharacterized protein (Fragment) OS=Ricinus communis GN=RCOM_0251910 PE=4 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.416e-38
Identity = 86/128 (67.19%), Postives = 104/128 (81.25%), Query Frame = 3
Query:   21 FHSHHSLPS--IAKWGWRREQDAGMASHRTQSQAFRVLANPNVSSGKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLFVK 398
            FHSH    S  + KWG+RR++D+   S RT+SQAFR+LANPNVS GK   +K+VIMVDP+EAKRLAAKQM  I+AKEK K+RR+IEAINGAWAMIGLT GLVIEGQTGKSI+ QL  Y+ AI+H F++
Sbjct:   22 FHSHILQRSAHVVKWGFRRDKDS---SSRTKSQAFRILANPNVS-GKRDFQKEVIMVDPLEAKRLAAKQMKEIQAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKSILDQLAGYWSAIVHFFLR 145          
BLAST of GT623343 vs. TrEMBL
Match: D7T0R2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_65.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032307001 PE=4 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.914e-35
Identity = 76/117 (64.96%), Postives = 91/117 (77.78%), Query Frame = 3
Query:   60 GWRREQDAGMA----SHRTQSQAFRVLANPNVSSGKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLFVK 398
            G RR QDA +     +H T+ QAF++LANPNVS+GK  S K+V+MVDP+EAKRLAAKQM   KAKEKLK+RR IEAINGAWAM+GLT GLVIEG TG  I+ QL  Y+GAI+  FV+
Sbjct:   28 GLRRGQDASLVIPRTAHSTRGQAFQILANPNVSAGKGNSDKEVVMVDPLEAKRLAAKQMQEFKAKEKLKRRRRIEAINGAWAMLGLTAGLVIEGHTGNGILAQLAGYWGAIVRFFVR 144          
BLAST of GT623343 vs. TrEMBL
Match: Q8LBN1_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.516e-32
Identity = 76/133 (57.14%), Postives = 98/133 (73.68%), Query Frame = 3
Query:    9 QFATFHSHHSLPSIAKW-GWRREQDAGMASHRTQSQAFRVLANPNVSS----GKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLF 392
            QF++ +   ++PS +   G RR QDA +  +RT+    RVLANPNVS     GK   KK+VIMVDP+EAKRLA+KQM+ IK +EK ++RREIEAINGAWA+IGL +GLVIE QTGK I+ QL  Y+ A++HLF
Sbjct:   21 QFSSSNGRFAIPSSSLVKGLRRHQDAKLVGNRTRVGVVRVLANPNVSPPPPPGKAKVKKEVIMVDPLEAKRLASKQMEEIKGREKQQRRREIEAINGAWAIIGLMIGLVIEAQTGKGILAQLAGYWSAVVHLF 153          
BLAST of GT623343 vs. TrEMBL
Match: Q9C5F3_ARATH (Putative uncharacterized protein At4g28025 OS=Arabidopsis thaliana GN=At4g28025 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.762e-32
Identity = 75/133 (56.39%), Postives = 97/133 (72.93%), Query Frame = 3
Query:    9 QFATFHSHHSLPSIAKW-GWRREQDAGMASHRTQSQAFRVLANPNVSS----GKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLF 392
            QF++ +   ++PS +   G RR QDA +  +R +    RVLANPNVS     GK   KK+VIMVDP+EAKRLA+KQM+ IK +EK ++RREIEAINGAWA+IGL +GLVIE QTGK I+ QL  Y+ A++HLF
Sbjct:   21 QFSSSNGRFAIPSSSLVKGLRRHQDAKLVGNRARVGVVRVLANPNVSPPPPPGKAKVKKEVIMVDPLEAKRLASKQMEEIKGREKQQRRREIEAINGAWAIIGLMIGLVIEAQTGKGILAQLAGYWSAVVHLF 153          
BLAST of GT623343 vs. TrEMBL
Match: D7MDN9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_491980 PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.762e-32
Identity = 78/134 (58.21%), Postives = 96/134 (71.64%), Query Frame = 3
Query:    3 NLQFATFHSHHSLPSIAKWGWRREQDAGMASHRTQSQAFRVLANPNVSS---GKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLFV 395
            N++F T  S     S+ K G RR QD  +  +R +    RVLANPNVS    GK   KK+VIMVDP+EAKRLA KQM+ IK +EK ++RREIEAINGAWA+IGLT+GLVIE QTGK I+ QL  Y+ A++HLFV
Sbjct:   26 NVRFTTPSS-----SLVK-GLRRHQDVKLVGNRARVGVVRVLANPNVSPPPPGKAKVKKEVIMVDPLEAKRLAGKQMEEIKGREKQQRRREIEAINGAWAIIGLTIGLVIEAQTGKGILAQLAGYWSAVVHLFV 153          
BLAST of GT623343 vs. TrEMBL
Match: Q6K9C2_ORYSJ (Os02g0610700 protein OS=Oryza sativa subsp. japonica GN=OJ1476_F05.21-1 PE=4 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.520e-27
Identity = 65/119 (54.62%), Postives = 83/119 (69.75%), Query Frame = 3
Query:   36 SLPSIAKWGWRREQDAGMASHRTQSQAFRVLANPNVSSGKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLF 392
            S PS ++W  + +Q       RT  Q+F   A+ + S GK  S  +V+MVDP+EAKRLAA+QM +I+A+EKLK+RR  EAINGA AMIGLTVGLV+EGQTGK I+ QL  Y  A+  LF
Sbjct:   36 SAPSTSRWTVQYKQPGHTFYRRTHVQSFLAFASTDASEGKRSSGDNVVMVDPLEAKRLAAQQMQQIQAREKLKRRRRAEAINGALAMIGLTVGLVLEGQTGKGILAQLAGYLTALSSLF 154          
BLAST of GT623343 vs. TrEMBL
Match: B8AFD5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08027 PE=4 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.520e-27
Identity = 65/119 (54.62%), Postives = 83/119 (69.75%), Query Frame = 3
Query:   36 SLPSIAKWGWRREQDAGMASHRTQSQAFRVLANPNVSSGKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLF 392
            S PS ++W  + +Q       RT  Q+F   A+ + S GK  S  +V+MVDP+EAKRLAA+QM +I+A+EKLK+RR  EAINGA AMIGLTVGLV+EGQTGK I+ QL  Y  A+  LF
Sbjct:   36 SAPSTSRWTVQYKQPGHTFYRRTHVQSFLAFASTDASEGKRSSGDNVVMVDPLEAKRLAAQQMQQIQAREKLKRRRRAEAINGALAMIGLTVGLVLEGQTGKGILAQLAGYLTALSSLF 154          
BLAST of GT623343 vs. TrEMBL
Match: B9HBP2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819391 PE=4 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.795e-25
Identity = 58/90 (64.44%), Postives = 71/90 (78.89%), Query Frame = 3
Query:  147 SGKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLFVK*TVQKV 416
            SGK    K+VIMVDP+EAKRLAAKQM  I+ +E+ K+RR+IEAINGAWAMIGLT GLVIEG TGKSI+ QL  Y+ AI+H FV+  +  +
Sbjct:   19 SGKSSPMKEVIMVDPLEAKRLAAKQMKEIQKRERFKRRRQIEAINGAWAMIGLTAGLVIEGHTGKSILEQLAGYWFAIVHFFVRPKISSI 108          
BLAST of GT623343 vs. TrEMBL
Match: B6UBB3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.823e-25
Identity = 67/127 (52.76%), Postives = 85/127 (66.93%), Query Frame = 3
Query:   12 FATFHSHHSLPSIAKWGWRREQDAGMASHRTQSQAFRVLANPNVSSGKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLF 392
            F T      +PS+++W  R +Q  G A  R+   AF   A+ + S GK  S ++V+MVDP+EAKRLAAKQM  I+AKEKLK+R + EAINGA AMIGLT GL++E QTGK I+ QL  Y  AI  LF
Sbjct:   29 FLTMERVSYVPSLSRWTIRYKQ-LGHAYQRSHVLAF---ASADASQGKRSSGENVVMVDPLEAKRLAAKQMQEIRAKEKLKRRSQAEAINGALAMIGLTAGLIVEAQTGKGILGQLAGYLTAISSLF 151          
BLAST of GT623343 vs. TrEMBL
Match: B4FDN0_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.195e-23
Identity = 62/119 (52.10%), Postives = 81/119 (68.07%), Query Frame = 3
Query:   36 SLPSIAKWGWRREQDAGMASHRTQSQAFRVLANPNVSSGKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLF 392
            S PS+++W  + +Q       R+   AF   A+ +   GK  S ++V+MVDP+EAKRLAAKQM  I+AKEKLK+RR+ EAINGA A+IGLT GL++E QTGK I+ QL  Y  AI  LF
Sbjct:   35 SAPSLSRWTIQYKQLGHTIYRRSHVLAF---ASADAPQGKRSSGENVVMVDPLEAKRLAAKQMQEIRAKEKLKRRRQAEAINGALAVIGLTAGLLVEAQTGKDILGQLAGYLTAISSLF 150          
BLAST of GT623343 vs. TAIR peptide
Match: AT4G28025.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:13935836-13937367 REVERSE LENGTH=157)

HSP 1 Score: 140.969 bits (354), Expect = 4.394e-34
Identity = 75/133 (56.39%), Postives = 97/133 (72.93%), Query Frame = 3
Query:    9 QFATFHSHHSLPSIAKW-GWRREQDAGMASHRTQSQAFRVLANPNVSS----GKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLF 392
            QF++ +   ++PS +   G RR QDA +  +R +    RVLANPNVS     GK   KK+VIMVDP+EAKRLA+KQM+ IK +EK ++RREIEAINGAWA+IGL +GLVIE QTGK I+ QL  Y+ A++HLF
Sbjct:   21 QFSSSNGRFAIPSSSLVKGLRRHQDAKLVGNRARVGVVRVLANPNVSPPPPPGKAKVKKEVIMVDPLEAKRLASKQMEEIKGREKQQRRREIEAINGAWAIIGLMIGLVIEAQTGKGILAQLAGYWSAVVHLF 153          
BLAST of GT623343 vs. TAIR peptide
Match: AT4G28025.2 (| Symbols: | unknown protein. | chr4:13935836-13937367 REVERSE LENGTH=148)

HSP 1 Score: 138.272 bits (347), Expect = 2.848e-33
Identity = 71/115 (61.74%), Postives = 87/115 (75.65%), Query Frame = 3
Query:   60 GWRREQDAGMASHRTQSQAFRVLANPNVSS----GKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLF 392
            G RR QDA +  +R +    RVLANPNVS     GK   KK+VIMVDP+EAKRLA+KQM+ IK +EK ++RREIEAINGAWA+IGL +GLVIE QTGK I+ QL  Y+ A++HLF
Sbjct:   30 GLRRHQDAKLVGNRARVGVVRVLANPNVSPPPPPGKAKVKKEVIMVDPLEAKRLASKQMEEIKGREKQQRRREIEAINGAWAIIGLMIGLVIEAQTGKGILAQLAGYWSAVVHLF 144          
The following BLAST results are available for this feature:
BLAST of GT623343 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9T892_RICCO1.416e-3867.19Putative uncharacterized protein (Fragment) OS=Ric... [more]
D7T0R2_VITVI1.914e-3564.96Whole genome shotgun sequence of line PN40024, sca... [more]
Q8LBN1_ARATH1.516e-3257.14Putative uncharacterized protein OS=Arabidopsis th... [more]
Q9C5F3_ARATH5.762e-3256.39Putative uncharacterized protein At4g28025 OS=Arab... [more]
D7MDN9_ARALY5.762e-3258.21Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q6K9C2_ORYSJ9.520e-2754.62Os02g0610700 protein OS=Oryza sativa subsp. japoni... [more]
B8AFD5_ORYSI9.520e-2754.62Putative uncharacterized protein OS=Oryza sativa s... [more]
B9HBP2_POPTR1.795e-2564.44Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B6UBB3_MAIZE6.823e-2552.76Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
B4FDN0_MAIZE2.195e-2352.10Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
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BLAST of GT623343 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G28025.14.394e-3456.39| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT4G28025.22.848e-3361.74| Symbols: | unknown protein. | chr4:13935836-139... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 17..36
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT623343 ID=GT623343; Name=GT623343; organism=Lens culinaris; type=EST; length=579bp
CAAACCTTCAATTCGCTACCTTTCATTCTCACCACTCTCTTCCATCCATC
GCCAAGTGGGGATGGAGAAGAGAGCAAGATGCAGGCATGGCTTCACATAG
AACCCAAAGTCAAGCATTTCGAGTCCTTGCTAATCCCAATGTGTCTTCAG
GAAAAGATGGCTCAAAAAAGGATGTAATCATGGTTGATCCTGTGGAAGCC
AAGCGATTAGCGGCCAAACAAATGGACAGAATTAAAGCAAAAGAAAAACT
CAAGAAAAGACGCGAAATTGAAGCAATTAATGGAGCTTGGGCAATGATTG
GCCTCACGGTGGGCCTAGTTATTGAAGGTCAAACTGGAAAAAGTATTATA
ACTCAGCTGCAAGACTACTTTGGAGCGATTATTCACCTTTTTGTGAAGTA
GACAGTCCAAAAGGTGCATGGATACATACTAAGAAATGCAGATTCTTTCT
CACATTCTTTGTGAATATATCTGTTAAAGGTTTACTGATAAGGTTTTTTC
TTAACACACCAAACCATACAATTTTCACTACTCATTTTTCCTTGTTACCT
GTTAATTCTACATATGTAACATGATTTCA
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