GT623343
EST Overview
Unigenes
This EST is part of the following unigenes:
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT623343 vs. TrEMBL
Match: B9T892_RICCO (Putative uncharacterized protein (Fragment) OS=Ricinus communis GN=RCOM_0251910 PE=4 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.416e-38 Identity = 86/128 (67.19%), Postives = 104/128 (81.25%), Query Frame = 3 Query: 21 FHSHHSLPS--IAKWGWRREQDAGMASHRTQSQAFRVLANPNVSSGKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLFVK 398 FHSH S + KWG+RR++D+ S RT+SQAFR+LANPNVS GK +K+VIMVDP+EAKRLAAKQM I+AKEK K+RR+IEAINGAWAMIGLT GLVIEGQTGKSI+ QL Y+ AI+H F++ Sbjct: 22 FHSHILQRSAHVVKWGFRRDKDS---SSRTKSQAFRILANPNVS-GKRDFQKEVIMVDPLEAKRLAAKQMKEIQAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKSILDQLAGYWSAIVHFFLR 145
BLAST of GT623343 vs. TrEMBL
Match: D7T0R2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_65.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032307001 PE=4 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.914e-35 Identity = 76/117 (64.96%), Postives = 91/117 (77.78%), Query Frame = 3 Query: 60 GWRREQDAGMA----SHRTQSQAFRVLANPNVSSGKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLFVK 398 G RR QDA + +H T+ QAF++LANPNVS+GK S K+V+MVDP+EAKRLAAKQM KAKEKLK+RR IEAINGAWAM+GLT GLVIEG TG I+ QL Y+GAI+ FV+ Sbjct: 28 GLRRGQDASLVIPRTAHSTRGQAFQILANPNVSAGKGNSDKEVVMVDPLEAKRLAAKQMQEFKAKEKLKRRRRIEAINGAWAMLGLTAGLVIEGHTGNGILAQLAGYWGAIVRFFVR 144
BLAST of GT623343 vs. TrEMBL
Match: Q8LBN1_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.516e-32 Identity = 76/133 (57.14%), Postives = 98/133 (73.68%), Query Frame = 3 Query: 9 QFATFHSHHSLPSIAKW-GWRREQDAGMASHRTQSQAFRVLANPNVSS----GKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLF 392 QF++ + ++PS + G RR QDA + +RT+ RVLANPNVS GK KK+VIMVDP+EAKRLA+KQM+ IK +EK ++RREIEAINGAWA+IGL +GLVIE QTGK I+ QL Y+ A++HLF Sbjct: 21 QFSSSNGRFAIPSSSLVKGLRRHQDAKLVGNRTRVGVVRVLANPNVSPPPPPGKAKVKKEVIMVDPLEAKRLASKQMEEIKGREKQQRRREIEAINGAWAIIGLMIGLVIEAQTGKGILAQLAGYWSAVVHLF 153
BLAST of GT623343 vs. TrEMBL
Match: Q9C5F3_ARATH (Putative uncharacterized protein At4g28025 OS=Arabidopsis thaliana GN=At4g28025 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.762e-32 Identity = 75/133 (56.39%), Postives = 97/133 (72.93%), Query Frame = 3 Query: 9 QFATFHSHHSLPSIAKW-GWRREQDAGMASHRTQSQAFRVLANPNVSS----GKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLF 392 QF++ + ++PS + G RR QDA + +R + RVLANPNVS GK KK+VIMVDP+EAKRLA+KQM+ IK +EK ++RREIEAINGAWA+IGL +GLVIE QTGK I+ QL Y+ A++HLF Sbjct: 21 QFSSSNGRFAIPSSSLVKGLRRHQDAKLVGNRARVGVVRVLANPNVSPPPPPGKAKVKKEVIMVDPLEAKRLASKQMEEIKGREKQQRRREIEAINGAWAIIGLMIGLVIEAQTGKGILAQLAGYWSAVVHLF 153
BLAST of GT623343 vs. TrEMBL
Match: D7MDN9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_491980 PE=4 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.762e-32 Identity = 78/134 (58.21%), Postives = 96/134 (71.64%), Query Frame = 3 Query: 3 NLQFATFHSHHSLPSIAKWGWRREQDAGMASHRTQSQAFRVLANPNVSS---GKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLFV 395 N++F T S S+ K G RR QD + +R + RVLANPNVS GK KK+VIMVDP+EAKRLA KQM+ IK +EK ++RREIEAINGAWA+IGLT+GLVIE QTGK I+ QL Y+ A++HLFV Sbjct: 26 NVRFTTPSS-----SLVK-GLRRHQDVKLVGNRARVGVVRVLANPNVSPPPPGKAKVKKEVIMVDPLEAKRLAGKQMEEIKGREKQQRRREIEAINGAWAIIGLTIGLVIEAQTGKGILAQLAGYWSAVVHLFV 153
BLAST of GT623343 vs. TrEMBL
Match: Q6K9C2_ORYSJ (Os02g0610700 protein OS=Oryza sativa subsp. japonica GN=OJ1476_F05.21-1 PE=4 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.520e-27 Identity = 65/119 (54.62%), Postives = 83/119 (69.75%), Query Frame = 3 Query: 36 SLPSIAKWGWRREQDAGMASHRTQSQAFRVLANPNVSSGKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLF 392 S PS ++W + +Q RT Q+F A+ + S GK S +V+MVDP+EAKRLAA+QM +I+A+EKLK+RR EAINGA AMIGLTVGLV+EGQTGK I+ QL Y A+ LF Sbjct: 36 SAPSTSRWTVQYKQPGHTFYRRTHVQSFLAFASTDASEGKRSSGDNVVMVDPLEAKRLAAQQMQQIQAREKLKRRRRAEAINGALAMIGLTVGLVLEGQTGKGILAQLAGYLTALSSLF 154
BLAST of GT623343 vs. TrEMBL
Match: B8AFD5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08027 PE=4 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.520e-27 Identity = 65/119 (54.62%), Postives = 83/119 (69.75%), Query Frame = 3 Query: 36 SLPSIAKWGWRREQDAGMASHRTQSQAFRVLANPNVSSGKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLF 392 S PS ++W + +Q RT Q+F A+ + S GK S +V+MVDP+EAKRLAA+QM +I+A+EKLK+RR EAINGA AMIGLTVGLV+EGQTGK I+ QL Y A+ LF Sbjct: 36 SAPSTSRWTVQYKQPGHTFYRRTHVQSFLAFASTDASEGKRSSGDNVVMVDPLEAKRLAAQQMQQIQAREKLKRRRRAEAINGALAMIGLTVGLVLEGQTGKGILAQLAGYLTALSSLF 154
BLAST of GT623343 vs. TrEMBL
Match: B9HBP2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819391 PE=4 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.795e-25 Identity = 58/90 (64.44%), Postives = 71/90 (78.89%), Query Frame = 3 Query: 147 SGKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLFVK*TVQKV 416 SGK K+VIMVDP+EAKRLAAKQM I+ +E+ K+RR+IEAINGAWAMIGLT GLVIEG TGKSI+ QL Y+ AI+H FV+ + + Sbjct: 19 SGKSSPMKEVIMVDPLEAKRLAAKQMKEIQKRERFKRRRQIEAINGAWAMIGLTAGLVIEGHTGKSILEQLAGYWFAIVHFFVRPKISSI 108
BLAST of GT623343 vs. TrEMBL
Match: B6UBB3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.823e-25 Identity = 67/127 (52.76%), Postives = 85/127 (66.93%), Query Frame = 3 Query: 12 FATFHSHHSLPSIAKWGWRREQDAGMASHRTQSQAFRVLANPNVSSGKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLF 392 F T +PS+++W R +Q G A R+ AF A+ + S GK S ++V+MVDP+EAKRLAAKQM I+AKEKLK+R + EAINGA AMIGLT GL++E QTGK I+ QL Y AI LF Sbjct: 29 FLTMERVSYVPSLSRWTIRYKQ-LGHAYQRSHVLAF---ASADASQGKRSSGENVVMVDPLEAKRLAAKQMQEIRAKEKLKRRSQAEAINGALAMIGLTAGLIVEAQTGKGILGQLAGYLTAISSLF 151
BLAST of GT623343 vs. TrEMBL
Match: B4FDN0_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.195e-23 Identity = 62/119 (52.10%), Postives = 81/119 (68.07%), Query Frame = 3 Query: 36 SLPSIAKWGWRREQDAGMASHRTQSQAFRVLANPNVSSGKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLF 392 S PS+++W + +Q R+ AF A+ + GK S ++V+MVDP+EAKRLAAKQM I+AKEKLK+RR+ EAINGA A+IGLT GL++E QTGK I+ QL Y AI LF Sbjct: 35 SAPSLSRWTIQYKQLGHTIYRRSHVLAF---ASADAPQGKRSSGENVVMVDPLEAKRLAAKQMQEIRAKEKLKRRRQAEAINGALAVIGLTAGLLVEAQTGKDILGQLAGYLTAISSLF 150
BLAST of GT623343 vs. TAIR peptide
Match: AT4G28025.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:13935836-13937367 REVERSE LENGTH=157) HSP 1 Score: 140.969 bits (354), Expect = 4.394e-34 Identity = 75/133 (56.39%), Postives = 97/133 (72.93%), Query Frame = 3 Query: 9 QFATFHSHHSLPSIAKW-GWRREQDAGMASHRTQSQAFRVLANPNVSS----GKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLF 392 QF++ + ++PS + G RR QDA + +R + RVLANPNVS GK KK+VIMVDP+EAKRLA+KQM+ IK +EK ++RREIEAINGAWA+IGL +GLVIE QTGK I+ QL Y+ A++HLF Sbjct: 21 QFSSSNGRFAIPSSSLVKGLRRHQDAKLVGNRARVGVVRVLANPNVSPPPPPGKAKVKKEVIMVDPLEAKRLASKQMEEIKGREKQQRRREIEAINGAWAIIGLMIGLVIEAQTGKGILAQLAGYWSAVVHLF 153
BLAST of GT623343 vs. TAIR peptide
Match: AT4G28025.2 (| Symbols: | unknown protein. | chr4:13935836-13937367 REVERSE LENGTH=148) HSP 1 Score: 138.272 bits (347), Expect = 2.848e-33 Identity = 71/115 (61.74%), Postives = 87/115 (75.65%), Query Frame = 3 Query: 60 GWRREQDAGMASHRTQSQAFRVLANPNVSS----GKDGSKKDVIMVDPVEAKRLAAKQMDRIKAKEKLKKRREIEAINGAWAMIGLTVGLVIEGQTGKSIITQLQDYFGAIIHLF 392 G RR QDA + +R + RVLANPNVS GK KK+VIMVDP+EAKRLA+KQM+ IK +EK ++RREIEAINGAWA+IGL +GLVIE QTGK I+ QL Y+ A++HLF Sbjct: 30 GLRRHQDAKLVGNRARVGVVRVLANPNVSPPPPPGKAKVKKEVIMVDPLEAKRLASKQMEEIKGREKQQRRREIEAINGAWAIIGLMIGLVIEAQTGKGILAQLAGYWSAVVHLF 144 The following BLAST results are available for this feature:
BLAST of GT623343 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT623343 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT623343 ID=GT623343; Name=GT623343; organism=Lens culinaris; type=EST; length=579bpback to top |