GT623488
EST Overview
Unigenes
This EST is part of the following unigenes:
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT623488 vs. TrEMBL
Match: D7TCG2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015095001 PE=4 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 5.664e-65 Identity = 130/249 (52.21%), Postives = 159/249 (63.86%), Query Frame = 2 Query: 71 KNKFPFTPSQWQELEHQALVYKYMASGISIPPDLLFTIRKSFLDSPL-SSRLFPNNQQHHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVL---------------KXXXXXXXXXXXXXXXXXXXXXXXXFDTQQHQNYPQNSCYGSNLQHSFVYPHTTXXXXXXXXXXXXF--EDNNGSLFLDSNSCSQNNGDYRYVYGQKEEVDEYAFFKE-PSGST 760 +N+FPFT +QWQELEHQAL++KYMASG+ IPPDL+F+I++S LDSPL +S+LFP +Q H GWN QMGLGRK+DPEPGRCRRTDGKKWRC+KEAYPDSKYCERHMHRG+NRSRKPVEV+ +TQ H + SCY ++L F+YPH++ + N L LDS S SQ + RYV+G KEEVDE+AFF E PSG+T Sbjct: 5 RNRFPFTATQWQELEHQALIFKYMASGMPIPPDLIFSIKRS-LDSPLPTSKLFPTHQSQHIGWNCFQMGLGRKVDPEPGRCRRTDGKKWRCAKEAYPDSKYCERHMHRGRNRSRKPVEVMTPSKTPPTVTTPTATMAANPPPPISSITVNSSNPTSYSLALETQNHHTHRHPSCYNTHLHLPFLYPHSSSSRPPGFGGGVELSPQHNTTHLLLDSGSYSQTDYRNRYVHGLKEEVDEHAFFSEQPSGAT 252
BLAST of GT623488 vs. TrEMBL
Match: B9RRC1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0712270 PE=4 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 2.811e-64 Identity = 135/234 (57.69%), Postives = 152/234 (64.96%), Query Frame = 2 Query: 74 NKFPFTPSQWQELEHQALVYKYMASGISIPPDLLFTIRKSFLDSPLSSRLFPNNQQHHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKXXXXXXXXXXXXXXXXXXXXXXXXFDT----QQHQNYPQNSCYGSNLQHSFV-YPHTTXXXXXXXXXXXXFEDNNGSLFLDSN-SCSQNNGDYRYVYGQKEEVDEYAFFKEPSGS 757 NKFPFT SQWQELEHQAL++KYM SGI IP DLLFTI++S LDSPLSS+LFP Q H GW+ QMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEV + Q++ + Y S+L H F+ HTT +DN+ L LDS+ SCS + DYR YG KEEVDE+AFF E SGS Sbjct: 6 NKFPFTASQWQELEHQALIFKYMVSGIPIPSDLLFTIKRSCLDSPLSSKLFPR-QPPHIGWSCFQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVANQTATTTNPTVSSVTKNHSNLLTPPSHSLSLLSSDQSHLHYAGYHSHLNHQFLSSSHTTSSRPPGIGLSP--QDNSTPLLLDSSGSCSLASADYRNAYGLKEEVDEHAFFSETSGS 236
BLAST of GT623488 vs. TrEMBL
Match: D7TZT0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016762001 PE=4 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 5.313e-55 Identity = 116/239 (48.54%), Postives = 142/239 (59.41%), Query Frame = 2 Query: 71 KNKFPFTPSQWQELEHQALVYKYMASGISIPPDLLFTIRKSFLDSPLSSRLFPNNQQHHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKXXXXXXXXXXXXXXXXXXXXXXXXF--------DTQQHQNYPQNSCYGSNLQHSFVYPHTTXXXXXXXXXXXXFEDNNGS--LFLDSNSCSQNNGDYRYVYGQKEEVDEYAFFKEPSGS 757 +N+ PFT SQWQELEHQAL++KY+ SG+ IP DL+ T+++S LDS LSSRLFP+ GW QMG GRK DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEV+ ++P + Y + + F+YPH + + + LFLDS S SQ + DYR+ +G +E VDE AFF E SG+ Sbjct: 6 RNRSPFTASQWQELEHQALIFKYIVSGVPIPADLICTVKRS-LDSSLSSRLFPHQP---IGWGCFQMGFGRKADPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVISATNPSPTISSINSNPSSTTTNSYSLSPLSPLSSSMTSETSHPHHHSYHNTSLYPFLYPHPSSSRPPGSCLSPQATSSYSTHHLFLDSGSYSQADRDYRHHHGMREGVDERAFFPEASGT 240
BLAST of GT623488 vs. TrEMBL
Match: B9S5R0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0652480 PE=4 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 2.019e-54 Identity = 115/248 (46.37%), Postives = 140/248 (56.45%), Query Frame = 2 Query: 71 KNKFPFTPSQWQELEHQALVYKYMASGISIPPDLLFTIRKSFLDSPLSSRLFPNNQQHHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKXXXXXXXXXXXXXXXXXXXXXXXXFDTQQHQNYPQNSCYG-----------------SNLQHSFVYPHTTXXXXXXXXXXXXFEDNNGSLFLDSNSCSQNNGDYRYVYGQKEEVDEYAFFKEPSGSTT 763 +N+ PFTPSQWQELEHQAL+YKYM SGI IPP+L+FT+++S L+S L+SRLFP+ GW Q+G GRK DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRG+NRSRKPVE+ T + P S Y +N+ F Y H++ +LFLDS S S + DYRY G +E +DE FF E S ++ Sbjct: 8 RNRSPFTPSQWQELEHQALIYKYMVSGIPIPPELIFTVKRS-LESSLASRLFPHQP---IGWGCFQVGFGRKADPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVELTSSTTNNTTASTVTNPSLSINRSLSATTTNNNTTSPSGSSYSFSPLSSPMEPEFHASGHNNILSPFPYSHSSSSRPQ--------NSTTHNLFLDSGSTSHVDKDYRYFNGMREGIDERTFFPEASSGSS 243
BLAST of GT623488 vs. TrEMBL
Match: B9GKU6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_548577 PE=4 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 5.498e-52 Identity = 110/242 (45.45%), Postives = 148/242 (61.16%), Query Frame = 2 Query: 65 MNKNKFPFTPSQWQELEHQALVYKYMASGISIPPDLLFTIRKSFLDSPLSSRLFPNNQQHHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKXXXXXXXXXXXXXXXXXXXXXXXXFDTQQHQ-NYP----------QNSCYGSNLQHSFVYPHTTXXXXXXXXXXXXFEDNNGSLFLDSNSCSQNNGDYRYVYGQKEEVDEYAFFKEPSGS 757 +++N+FPFT +QWQELEHQAL+YKYM SG+ +PP+LL+++++S L S L+SRLFP+ GW Q G GRK DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRG++RSRKPVE+ + + ++P QN +G+ L + F+YPH++ +LFL+S S Q + ++RY +G +E+VDE AFF + GS Sbjct: 6 ISRNRFPFTATQWQELEHQALIYKYMVSGVPVPPELLYSVKRS-LGSSLASRLFPHQP---IGWGCFQAGFGRKADPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRSRSRKPVELTSSTTTTATTIPLTSINRNLSNPTISPSSSSYSFSHPSSAESEVYAHQNPSHGTFL-NPFLYPHSS-SSGPPDSGFSPLNSTPHNLFLESGSSPQVDKEHRYYHGMREDVDERAFFPDGLGS 241
BLAST of GT623488 vs. TrEMBL
Match: Q9LVK4_ARATH (Gb|AAF17567.1 OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.773e-42 Identity = 78/113 (69.03%), Postives = 95/113 (84.07%), Query Frame = 2 Query: 83 PFTPSQWQELEHQALVYKYMASGISIPPDLLFTIRKSFLDSPLSSRLFPNNQQHHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 421 PFTP+QW+ELEHQAL+YKYM SG+ +PP+L+F+IR+S LD+ L SRL P+ GW QMG GRK DPEPGRCRRTDGKKWRCS+EAYPDSKYCE+HMHRG+NR+RK ++ Sbjct: 16 PFTPTQWEELEHQALIYKYMVSGVPVPPELIFSIRRS-LDTSLVSRLLPHQS---LGWGCYQMGFGRKPDPEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRARKSLD 124
BLAST of GT623488 vs. TrEMBL
Match: Q8L8A6_ARATH (Transcription activator OS=Arabidopsis thaliana GN=GRF5 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.773e-42 Identity = 78/113 (69.03%), Postives = 95/113 (84.07%), Query Frame = 2 Query: 83 PFTPSQWQELEHQALVYKYMASGISIPPDLLFTIRKSFLDSPLSSRLFPNNQQHHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 421 PFTP+QW+ELEHQAL+YKYM SG+ +PP+L+F+IR+S LD+ L SRL P+ GW QMG GRK DPEPGRCRRTDGKKWRCS+EAYPDSKYCE+HMHRG+NR+RK ++ Sbjct: 16 PFTPTQWEELEHQALIYKYMVSGVPVPPELIFSIRRS-LDTSLVSRLLPHQS---LGWGCYQMGFGRKPDPEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRARKSLD 124
BLAST of GT623488 vs. TrEMBL
Match: D7L2A7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478803 PE=4 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.773e-42 Identity = 78/113 (69.03%), Postives = 95/113 (84.07%), Query Frame = 2 Query: 83 PFTPSQWQELEHQALVYKYMASGISIPPDLLFTIRKSFLDSPLSSRLFPNNQQHHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 421 PFTP+QW+ELEHQAL+YKYM SG+ +PP+L+F+IR+S LD+ L SRL P+ GW QMG GRK DPEPGRCRRTDGKKWRCS+EAYPDSKYCE+HMHRG+NR+RK ++ Sbjct: 16 PFTPTQWEELEHQALIYKYMVSGVPVPPELIFSIRRS-LDTSLVSRLLPHQS---LGWGCYQMGFGRKPDPEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRARKSLD 124
BLAST of GT623488 vs. TrEMBL
Match: C0SVA9_ARATH (Putative uncharacterized protein At3g13960 (Fragment) OS=Arabidopsis thaliana GN=At3g13960 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.773e-42 Identity = 78/113 (69.03%), Postives = 95/113 (84.07%), Query Frame = 2 Query: 83 PFTPSQWQELEHQALVYKYMASGISIPPDLLFTIRKSFLDSPLSSRLFPNNQQHHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 421 PFTP+QW+ELEHQAL+YKYM SG+ +PP+L+F+IR+S LD+ L SRL P+ GW QMG GRK DPEPGRCRRTDGKKWRCS+EAYPDSKYCE+HMHRG+NR+RK ++ Sbjct: 15 PFTPTQWEELEHQALIYKYMVSGVPVPPELIFSIRRS-LDTSLVSRLLPHQS---LGWGCYQMGFGRKPDPEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRARKSLD 123
BLAST of GT623488 vs. TrEMBL
Match: Q9SDZ5_ORYSA (Growth-regulating factor 1 OS=Oryza sativa GN=GRF1 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.960e-41 Identity = 86/121 (71.07%), Postives = 95/121 (78.51%), Query Frame = 2 Query: 77 KFPFTPSQWQELEHQALVYKYMASGISIPPDLLFTIRKSFL-DSPLS---SRLFPNNQQHHFGWNYLQMGLGRKI-DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEV 424 ++PFT SQWQELEHQAL+YKYMASG IP DL+ +R+SFL DS L+ S FP Q GW MG GRK DPEPGRCRRTDGKKWRCSKEAYPDSKYCE+HMHRGKNRSRKPVE+ Sbjct: 16 RYPFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSPSLAFP--PQPSLGWGCFGMGFGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEM 134
BLAST of GT623488 vs. TAIR peptide
Match: AT3G13960.1 (| Symbols: AtGRF5, GRF5 | growth-regulating factor 5 | chr3:4608526-4610160 FORWARD LENGTH=397) HSP 1 Score: 176.792 bits (447), Expect = 1.158e-44 Identity = 78/113 (69.03%), Postives = 95/113 (84.07%), Query Frame = 2 Query: 83 PFTPSQWQELEHQALVYKYMASGISIPPDLLFTIRKSFLDSPLSSRLFPNNQQHHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 421 PFTP+QW+ELEHQAL+YKYM SG+ +PP+L+F+IR+S LD+ L SRL P+ GW QMG GRK DPEPGRCRRTDGKKWRCS+EAYPDSKYCE+HMHRG+NR+RK ++ Sbjct: 16 PFTPTQWEELEHQALIYKYMVSGVPVPPELIFSIRRS-LDTSLVSRLLPHQS---LGWGCYQMGFGRKPDPEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRARKSLD 124
BLAST of GT623488 vs. TAIR peptide
Match: AT2G06200.1 (| Symbols: AtGRF6, GRF6 | growth-regulating factor 6 | chr2:2426340-2427255 FORWARD LENGTH=244) HSP 1 Score: 170.244 bits (430), Expect = 1.084e-42 Identity = 80/120 (66.67%), Postives = 92/120 (76.67%), Query Frame = 2 Query: 77 KFPFTPSQWQELEHQALVYKYMASGISIPPDLLFTIRKSFL-----DSPLSSRLFPNNQQHHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNR--SRKP 415 + PFT SQW+ELE+QALV+KY+A+ + +PP LLF I++ FL S SS F HFGWN +MG+GRKID EPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNR SRKP Sbjct: 4 RIPFTESQWEELENQALVFKYLAANMPVPPHLLFLIKRPFLFSSSSSSSSSSSFFSPTLSPHFGWNVYEMGMGRKIDAEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSSSRKP 123
BLAST of GT623488 vs. TAIR peptide
Match: AT4G37740.1 (| Symbols: AtGRF2, GRF2 | growth-regulating factor 2 | chr4:17725533-17727609 REVERSE LENGTH=535) HSP 1 Score: 139.428 bits (350), Expect = 2.049e-33 Identity = 68/117 (58.12%), Postives = 86/117 (73.50%), Query Frame = 2 Query: 77 KFPFTPSQWQELEHQALVYKYMASGISIPPDLLFTIRKSFLDSPLSSRLFPNNQQHHFGWNYLQMGL-GRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEV 424 K PFT +QW ELE QAL+YKY+ + + +P LL +I+KSF P S L P++ FGW +G G +DPEPGRCRRTDGKKWRCS++A PD KYCERH++RG++RSRKPVEV Sbjct: 162 KGPFTLTQWAELEQQALIYKYITANVPVPSSLLISIKKSFY--PYGS-LPPSS----FGWGTFHLGFAGGNMDPEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRKPVEV 271
BLAST of GT623488 vs. TAIR peptide
Match: AT2G22840.1 (| Symbols: AtGRF1, GRF1 | growth-regulating factor 1 | chr2:9728841-9731141 FORWARD LENGTH=530) HSP 1 Score: 137.887 bits (346), Expect = 5.963e-33 Identity = 66/116 (56.90%), Postives = 85/116 (73.28%), Query Frame = 2 Query: 77 KFPFTPSQWQELEHQALVYKYMASGISIPPDLLFTIRKSFLDSPLSSRLFPNNQQHHFGWNYLQMGL-GRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 421 K PF+ +QW ELE QAL+YKY+ + + +P LL +++KSF P S L PN+ FGW +G G +DPEPGRCRRTDGKKWRCS++A PD KYCERH++RG++RSRKPVE Sbjct: 131 KGPFSLTQWAELEQQALIYKYITANVPVPSSLLLSLKKSFF--PYGS-LPPNS----FGWGSFHLGFSGGNMDPEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRKPVE 239
BLAST of GT623488 vs. TAIR peptide
Match: AT2G36400.1 (| Symbols: AtGRF3, GRF3 | growth-regulating factor 3 | chr2:15270300-15272617 REVERSE LENGTH=398) HSP 1 Score: 130.568 bits (327), Expect = 9.519e-31 Identity = 66/124 (53.23%), Postives = 85/124 (68.55%), Query Frame = 2 Query: 68 NKNKFP-----FTPSQWQELEHQALVYKYMASGISIPPDLLFTIRKSFLDSPLSSRLFPNNQQHHFGWNYLQMGLGRK-IDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 421 + ++FP F+ +QWQELE QAL+Y+YM +G ++P +LL I+KS L LS F ++ H LGR +DPEPGRCRRTDGKKWRCS++ + KYCERHMHRG+NRSRKPVE Sbjct: 66 SSSRFPKMGSFFSWAQWQELELQALIYRYMLAGAAVPQELLLPIKKSLLH--LSPSYFLHHPLQHLPHYQPAWYLGRAAMDPEPGRCRRTDGKKWRCSRDVFAGHKYCERHMHRGRNRSRKPVE 187
BLAST of GT623488 vs. TAIR peptide
Match: AT3G52910.1 (| Symbols: AtGRF4, GRF4 | growth-regulating factor 4 | chr3:19616177-19618268 REVERSE LENGTH=380) HSP 1 Score: 125.561 bits (314), Expect = 3.062e-29 Identity = 63/114 (55.26%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 86 FTPSQWQELEHQALVYKYMASGISIPPDLLFTIRKSFL-DSPLSSRLFPNNQQHHFGWNYLQMGLGR-KIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 421 F+ +QWQELE QAL+Y+YM +G S+P +LL I+KS L SP+ P QH F + GR +DPEPGRC+RTDGKKWRCS++ KYC+RH+HRG+NRSRKPVE Sbjct: 83 FSWAQWQELELQALIYRYMLAGASVPQELLLPIKKSLLHQSPMHFLHHP--LQHSFPHHQPSWYWGRGAMDPEPGRCKRTDGKKWRCSRDVVAGHKYCDRHIHRGRNRSRKPVE 194
BLAST of GT623488 vs. TAIR peptide
Match: AT5G53660.1 (| Symbols: AtGRF7, GRF7 | growth-regulating factor 7 | chr5:21794636-21795929 FORWARD LENGTH=365) HSP 1 Score: 105.145 bits (261), Expect = 4.283e-23 Identity = 56/114 (49.12%), Postives = 72/114 (63.16%), Query Frame = 2 Query: 80 FPFTPSQWQELEHQALVYKYMASGISIPPDLLFTIRKSFLDSPLSSRLFPNNQQHHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 421 +PFT +Q +ELE QA++YKYM + I +P DLL + SP S+ P N ++ G D EPGRCRRTDGKKWRC+KE + KYCE+H+HRG+ RSRK VE Sbjct: 58 YPFTNAQLKELERQAMIYKYMIASIPVPFDLL-------VSSPSSAS--PCNNKNIAG------------DLEPGRCRRTDGKKWRCAKEVVSNHKYCEKHLHRGRPRSRKHVE 150
BLAST of GT623488 vs. TAIR peptide
Match: AT4G24150.1 (| Symbols: AtGRF8, GRF8 | growth-regulating factor 8 | chr4:12535972-12539387 FORWARD LENGTH=493) HSP 1 Score: 95.1301 bits (235), Expect = 4.432e-20 Identity = 54/139 (38.85%), Postives = 71/139 (51.08%), Query Frame = 2 Query: 86 FTPSQWQELEHQALVYKYMASGISIPPDLL----------------------FTIRKSFLDSPLSSRLFPNNQQHHFGWNYLQMGLGRKI-----DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 421 F+ +QW ELE Q +YKYM + + +PP+LL F+I + + PLS + G LQ+G+ D EP RC+RTDGKKWRCS+ PD KYCERH H+ + RSRK VE Sbjct: 150 FSEAQWHELERQRNIYKYMMASVPVPPELLTPFPKNHQSNTNPDVDTYRSGMFSIYADYKNLPLSMWMTVTVAVATGG--SLQLGIASSASNNTADLEPWRCKRTDGKKWRCSRNVIPDQKYCERHTHKSRPRSRKHVE 286
BLAST of GT623488 vs. TAIR peptide
Match: AT2G45480.1 (| Symbols: AtGRF9, GRF9 | growth-regulating factor 9 | chr2:18745583-18747403 FORWARD LENGTH=429) HSP 1 Score: 90.5077 bits (223), Expect = 1.092e-18 Identity = 52/120 (43.33%), Postives = 67/120 (55.83%), Query Frame = 2 Query: 71 KNKFPFTPS-QWQELEHQALVYKYMASGISIPPDLLFTIRKSFLDSPLSSRLFPNNQQHHFGWNYLQMGLGR--KIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 421 +NK+P+ + Q E QALVY+Y+ +G+ +P L+ I S S S N +H G+ ++ EP RCRRTDGKKWRCS KYCERHMHRG+ RSRK VE Sbjct: 17 RNKWPWMKAAQLMEFRMQALVYRYIEAGLRVPHHLVVPIWNSLALSSSS------NYNYHSSSLLSNKGVTHIDTLETEPTRCRRTDGKKWRCSNTVLLFEKYCERHMHRGRKRSRKLVE 130 HSP 2 Score: 69.707 bits (169), Expect = 1.994e-12 Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 2 Query: 278 GRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 421 G + D EPGRCRRTDGKKWRCSK+ KYC++HMHRG + + PV+ Sbjct: 301 GVETDNEPGRCRRTDGKKWRCSKDVLSGQKYCDKHMHRGM-KKKHPVD 347 The following BLAST results are available for this feature:
BLAST of GT623488 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT623488 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 9
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT623488 ID=GT623488; Name=GT623488; organism=Lens culinaris; type=EST; length=766bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|