GT626090
EST Overview
Unigenes
This EST is part of the following unigenes:
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT626090 vs. TrEMBL
Match: C6TJL8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 2.838e-83 Identity = 159/192 (82.81%), Postives = 168/192 (87.50%), Query Frame = 2 Query: 2 GPGFGA-TQFMPPPRQVDNYYPPAEMPLPLDKQPHHGISAYGRDASIGVHTSSNTQSAPSMVTQITQQMQIPLSYADAVIGTAGTNISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMXXXXXXXXXXXPVQQQTGGPAADQGYNTYPAHGSVYASPPPSNPGHAGGYGSVYGANYGY 574 GPGFG +Q+MPPPRQ+D+YYP AEMP P+D+QPH GISAYGRDASIGVH SSNTQSAPS+VTQITQQMQIPLSYADAVIGTAG +ISYIRRASGATVTIQE RGVPGEMTVEISGTASQVQTAQQLIQNFM P Q QT PAADQGYN+YPAHGSVYAS PPSNPGHAGGYGSVYGANYGY Sbjct: 20 GPGFGPPSQYMPPPRQLDSYYPSAEMPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIVTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQNFM--AEAAAAAAAPAQPQTTVPAADQGYNSYPAHGSVYAS-PPSNPGHAGGYGSVYGANYGY 208
BLAST of GT626090 vs. TrEMBL
Match: B9S7H6_RICCO (Poly(RC)-binding protein, putative OS=Ricinus communis GN=RCOM_0607560 PE=4 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 2.486e-79 Identity = 151/194 (77.84%), Postives = 166/194 (85.57%), Query Frame = 2 Query: 2 GPGFGATQFMPPPRQVDNYYPPAEMPLPLDKQPHHGISAYGRDASIGVHTSSNTQSAPSMVTQITQQMQIPLSYADAVIGTAGTNISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMXXXXXXXXXXXPVQQQTGGPAADQGYNTYPAHGSVYASPPPSNPGHA---GGYGSVYGANYGY 574 GPG+G Q+MPPPRQ++NYYPPA++P P++KQPH GISAYGR+A +GVH SSN+Q+APSM+TQITQQMQIPLSYADAVIGTAGT+ISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM P Q QTGG + DQGYN Y AHGSVYAS PPSNPGHA GGYGSVYG NYGY Sbjct: 363 GPGYGNPQYMPPPRQIENYYPPADLPPPMEKQPHQGISAYGREAPMGVHGSSNSQAAPSMITQITQQMQIPLSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM------AEAGAPTQAQTGG-STDQGYNPYAAHGSVYAS-PPSNPGHAGHTGGYGSVYGTNYGY 548
BLAST of GT626090 vs. TrEMBL
Match: B9I5K8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_729865 PE=4 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 1.081e-74 Identity = 147/194 (75.77%), Postives = 161/194 (82.99%), Query Frame = 2 Query: 2 GPGFGAT-QFMPPPRQVDNYYPPAEMPLPLDKQPHHGISAYGRDASIGVHTSSNTQSAPSMVTQITQQMQIPLSYADAVIGTAGTNISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMXXXXXXXXXXXPVQQQTGGPAADQGYNTYPAHGSVYASPP--PSNPGHAGGYGSVYGANYGY 574 GPG+G Q+MPPPRQ+DNYYPPA+MP ++KQPH GISAYGR+A +G H SSN Q+APSM+TQITQQMQIPLSYADAVIGTAG +ISYIRRASGATVTIQETRGVPG MTVEISGTASQVQTAQQLIQNFM P Q QTGG AADQGYN Y +H SVYASPP P + GHAGGYGS+YGANYGY Sbjct: 207 GPGYGQNPQYMPPPRQLDNYYPPADMPPLMEKQPHQGISAYGREAPMGSHASSNAQAAPSMITQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGAMTVEISGTASQVQTAQQLIQNFM------AEAGAPAQPQTGG-AADQGYNPY-SHSSVYASPPSNPEHTGHAGGYGSMYGANYGY 392
BLAST of GT626090 vs. TrEMBL
Match: D7TXC7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_81.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036237001 PE=4 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 5.551e-71 Identity = 137/194 (70.62%), Postives = 155/194 (79.90%), Query Frame = 2 Query: 2 GPGFGATQ-FMPPPRQVDNYYPPAEMPLPLDKQPHHGISAYGRDASIGVHTSSNTQSAPSMVTQITQQMQIPLSYADAVIGTAGTNISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMXXXXXXXXXXXPVQQQTGGPAADQGYNTYPAHGSVYASPP--PSNPGHAGGYGSVYGANYGY 574 GPGFG +MPPPRQ+D+YYPP E+P P++KQPH GISAYGR+ +G H S+ Q APSM+TQ+TQQMQIPLSYADAVIGTAG +ISYIRRASGATVTIQETRGVPGEMTVEI+GTASQVQ AQQLIQNFM P Q Q GG +ADQGYN+Y AHGS+YASP P++ H GGYG VYGANYGY Sbjct: 325 GPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFM------AEAAAPAQAQAGG-SADQGYNSYAAHGSMYASPASNPAHASHTGGYGPVYGANYGY 511
BLAST of GT626090 vs. TrEMBL
Match: B9MZB2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_595396 PE=4 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 2.578e-68 Identity = 137/194 (70.62%), Postives = 152/194 (78.35%), Query Frame = 2 Query: 2 GPGFGAT-QFMPPPRQVDNYYPPAEMPLPLDKQPHHGISAYGRDASIGVHTSSNTQSAPSMVTQITQQMQIPLSYADAVIGTAGTNISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMXXXXXXXXXXXPVQQQTGGPAADQGYNTYPAHGSVYASPP--PSNPGHAGGYGSVYGANYGY 574 GPG+G Q+M PPRQ DNYYPP++MP P++KQPH GISAYGR +G H SSN Q+APSM+TQITQQMQIPLSYADAVIGTAG +ISYIRRASGATVTIQETRGVP MTVEISGTASQVQTAQQLIQ P Q QTGGP ADQGYN Y +H SVYASPP P + GH GGY S+YGA++GY Sbjct: 163 GPGYGQNPQYMQPPRQHDNYYPPSDMPPPMEKQPHQGISAYGRQTPMGGHASSNAQAAPSMITQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPEAMTVEISGTASQVQTAQQLIQAIF--------SGAPAQPQTGGP-ADQGYNPY-SHSSVYASPPSNPEHTGHTGGYSSMYGASFGY 346
BLAST of GT626090 vs. TrEMBL
Match: A5ASG9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007074 PE=4 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 2.578e-68 Identity = 137/206 (66.50%), Postives = 155/206 (75.24%), Query Frame = 2 Query: 2 GPGFGATQ-FMPPPRQVDNYYPPAEMPLPLDKQPHHGISAYGRDASIGVHTSSNTQSAPSMVTQITQQMQIPLSYADAVIGTAGTNISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ------------NFMXXXXXXXXXXXPVQQQTGGPAADQGYNTYPAHGSVYASPP--PSNPGHAGGYGSVYGANYGY 574 GPGFG +MPPPRQ+D+YYPP E+P P++KQPH GISAYGR+ +G H S+ Q APSM+TQ+TQQMQIPLSYADAVIGTAG +ISYIRRASGATVTIQETRGVPGEMTVEI+GTASQVQ AQQLIQ NFM P Q Q GG +ADQGYN+Y AHGS+YASP P++ H GGYG VYGANYGY Sbjct: 336 GPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQALFLPVFDTKLLNFM------AEAAAPAQAQAGG-SADQGYNSYAAHGSMYASPASNPAHASHTGGYGPVYGANYGY 534
BLAST of GT626090 vs. TrEMBL
Match: A9NUV7_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.794e-53 Identity = 116/200 (58.00%), Postives = 137/200 (68.50%), Query Frame = 2 Query: 2 GPGFGATQFMPPPRQVDNYYPPAEMPLPLDKQPHHGISAYGRDASIGVHTSSNTQSAPSMVTQITQQMQIPLSYADAVIGTAGTNISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMXXXXXXXXXXXPVQQQTGGPA-----ADQGYNTYPAHGSVYASPPPSNPGHA----GGYGSVYGANYGY 574 G G G TQ+M Q DNYYPP++ LPL+ Q HHG+S YGRD S+ H+ +N AP ++TQ+TQ MQIPLSYADA+IGTAG NISY+RR SGAT+ +QETRGVPGEMTVEI GTA+QVQTAQQLIQNFM +G PA D GYN+YP S+Y+SP P N GHA GGY S Y +NYGY Sbjct: 299 GAGLGNTQYMSSAFQHDNYYPPSD--LPLESQGHHGLSVYGRDPSLAGHSVANPPPAP-VITQVTQHMQIPLSYADAIIGTAGANISYMRRNSGATIAVQETRGVPGEMTVEIRGTATQVQTAQQLIQNFMAG-------------ASGPPANTYSSVDSGYNSYPTQNSMYSSPQP-NTGHAGHSTGGYVSHYNSNYGY 481
BLAST of GT626090 vs. TrEMBL
Match: D7L277_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_477721 PE=4 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 5.220e-53 Identity = 118/193 (61.14%), Postives = 133/193 (68.91%), Query Frame = 2 Query: 2 GPGFGATQFMPPPRQVDNYYPPAEMPLP-LDKQPHHGISAYGRDASIGVHTSSNTQSAPSMVTQ-ITQQMQIPLSYADAVIGTAGTNISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMXXXXXXXXXXXPVQQQTGGPAADQGYNTYPAHGSVYASPPPSNPGHAGGYGSVYGANYGY 574 G G +M PP + D+YYPP EM P ++KQPH GISAYGR+ + VH SS AP MV Q +TQQMQIPLSYADAVIGT+G+NISY RR SGATVTIQETRGVPGEMTVE+SGT SQVQTA QLIQNFM P Q QT P QGYN Y HGSVYA+ P + P GGY + Y + YGY Sbjct: 388 GYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSS----APPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAMQLIQNFM----AEAGAPAPAQPQTVAP-EQQGYNPYATHGSVYAAAPTNPP---GGYATDYSSGYGY 568
BLAST of GT626090 vs. TrEMBL
Match: Q9SR13_ARATH (AT3g04610/F7O18_9 OS=Arabidopsis thaliana GN=At3g04610 PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 8.903e-53 Identity = 118/193 (61.14%), Postives = 133/193 (68.91%), Query Frame = 2 Query: 2 GPGFGATQFMPPPRQVDNYYPPAEMPLP-LDKQPHHGISAYGRDASIGVHTSSNTQSAPSMVTQ-ITQQMQIPLSYADAVIGTAGTNISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMXXXXXXXXXXXPVQQQTGGPAADQGYNTYPAHGSVYASPPPSNPGHAGGYGSVYGANYGY 574 G G +M PP + D+YYPP EM P ++KQPH GISAYGR+ + VH SS AP MV Q +TQQMQIPLSYADAVIGT+G+NISY RR SGATVTIQETRGVPGEMTVE+SGT SQVQTA QLIQNFM P Q QT P QGYN Y HGSVYA+ P + P GGY + Y + YGY Sbjct: 397 GYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSS----APPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFM----AEAGAPAPAQPQTVAP-EQQGYNPYATHGSVYAAAPTNPP---GGYATDYSSGYGY 577
BLAST of GT626090 vs. TrEMBL
Match: Q58T16_ARATH (FLK OS=Arabidopsis thaliana GN=FLK PE=4 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 8.903e-53 Identity = 118/193 (61.14%), Postives = 133/193 (68.91%), Query Frame = 2 Query: 2 GPGFGATQFMPPPRQVDNYYPPAEMPLP-LDKQPHHGISAYGRDASIGVHTSSNTQSAPSMVTQ-ITQQMQIPLSYADAVIGTAGTNISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMXXXXXXXXXXXPVQQQTGGPAADQGYNTYPAHGSVYASPPPSNPGHAGGYGSVYGANYGY 574 G G +M PP + D+YYPP EM P ++KQPH GISAYGR+ + VH SS AP MV Q +TQQMQIPLSYADAVIGT+G+NISY RR SGATVTIQETRGVPGEMTVE+SGT SQVQTA QLIQNFM P Q QT P QGYN Y HGSVYA+ P + P GGY + Y + YGY Sbjct: 397 GYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSS----APPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFM----AEAGAPAPAQPQTVAP-EQQGYNPYATHGSVYAAAPTNPP---GGYATDYSSGYGY 577
BLAST of GT626090 vs. TAIR peptide
Match: AT3G04610.1 (| Symbols: FLK | RNA-binding KH domain-containing protein | chr3:1250762-1254272 REVERSE LENGTH=577) HSP 1 Score: 211.075 bits (536), Expect = 5.754e-55 Identity = 118/193 (61.14%), Postives = 133/193 (68.91%), Query Frame = 2 Query: 2 GPGFGATQFMPPPRQVDNYYPPAEMPLP-LDKQPHHGISAYGRDASIGVHTSSNTQSAPSMVTQ-ITQQMQIPLSYADAVIGTAGTNISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMXXXXXXXXXXXPVQQQTGGPAADQGYNTYPAHGSVYASPPPSNPGHAGGYGSVYGANYGY 574 G G +M PP + D+YYPP EM P ++KQPH GISAYGR+ + VH SS AP MV Q +TQQMQIPLSYADAVIGT+G+NISY RR SGATVTIQETRGVPGEMTVE+SGT SQVQTA QLIQNFM P Q QT P QGYN Y HGSVYA+ P + P GGY + Y + YGY Sbjct: 397 GYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSS----APPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFM----AEAGAPAPAQPQTVAP-EQQGYNPYATHGSVYAAAPTNPP---GGYATDYSSGYGY 577
BLAST of GT626090 vs. TAIR peptide
Match: AT4G26000.1 (| Symbols: PEP | RNA-binding KH domain-containing protein | chr4:13197280-13199539 FORWARD LENGTH=495) HSP 1 Score: 101.293 bits (251), Expect = 6.421e-22 Identity = 62/140 (44.29%), Postives = 81/140 (57.86%), Query Frame = 2 Query: 107 GISAYGRDASIGV-HTSSNTQSAPSMVTQITQQMQIPLSYADAVIGTAGTNISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMXXXXXXXXXXXPVQQQTGGPAADQGY-NTYPAHGSVYASPPPS 520 G+S Y +D + H+ + + + VTQ++Q MQIP SYA+ +IG G NI+YIRR SGAT+TI+E+ P ++TVEI GT SQVQTA+QLIQ F+ PV G D GY YP S P PS Sbjct: 312 GVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQLIQEFI------INHKEPVSVSGGYARIDSGYVPAYPPQLSNRQEPLPS 444
BLAST of GT626090 vs. TAIR peptide
Match: AT5G46190.1 (| Symbols: | RNA-binding KH domain-containing protein | chr5:18723435-18725834 REVERSE LENGTH=644) HSP 1 Score: 54.299 bits (129), Expect = 9.001e-8 Identity = 32/100 (32.00%), Postives = 52/100 (52.00%), Query Frame = 2 Query: 107 GISAYGR----DASIGVHTSSNTQSAPSMVTQITQQMQIPLSYADAVIGTAGTNISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFM 394 GI YG + S G ++S ++ + T +++IP + V+G G N+ IRR SGA + I +++ G ISGT+ Q +TA+ L Q F+ Sbjct: 542 GIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRVALISGTSEQKRTAENLFQAFI 641 The following BLAST results are available for this feature:
BLAST of GT626090 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT626090 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT626090 ID=GT626090; Name=GT626090; organism=Lens culinaris; type=EST; length=784bpback to top |