GT623293

EST Overview
NameGT623293
Unique NameGT623293
TypeEST
OrganismLens culinaris (lentil)
Sequence length439
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
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BLAST of GT623293 vs. TrEMBL
Match: C6TFN9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.097e-11
Identity = 40/71 (56.34%), Postives = 45/71 (63.38%), Query Frame = 2 
Query:   29 KVSGDLKTPPSSLDLNSGIGVTPPYNSSYVLATRSSRQVLSYWTCSKLCAXXXXXXXXXXYTLRGRVKRWA 241
            KVSGDLK+  SS D        PP +SS +LATR  RQ +SYWTCSKLCA          Y+LRGRVKRWA
Sbjct:    7 KVSGDLKS--SSFD-RVREAPPPPPDSSLLLATRPPRQAVSYWTCSKLCAFCFVAGAVFGYSLRGRVKRWA 74
The following BLAST results are available for this feature:
BLAST of GT623293 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
C6TFN9_SOYBN8.097e-1156.34Putative uncharacterized protein OS=Glycine max PE... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 40..52
score
NoneNo IPR availableSEGsegsegcoord: 60..69
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT623293 ID=GT623293; Name=GT623293; organism=Lens culinaris; type=EST; length=439bp
AATGAACGGTGCTGTTAGAACCGCCGTTAAGGTTTCCGGCGACCTCAAAA
CACCGCCGTCAAGCTTAGATCTCAACAGCGGCATCGGAGTAACACCTCCT
TACAATTCATCCTATGTCTTAGCTACCAGATCATCCAGACAAGTTCTCTC
TTACTGGACTTGCTCAAAGCTTTGTGCGGTTTTCTTTGTTGGTGGAGTTG
TTTTTGGTTACACTCTCAGAGGACGTGTTAAGCGTTGGGCTTCCAAGATT
CTCAAGAAGCTTAGCTGAAACAAACTTTTGATTTCACTTTTTCATAGTGA
TTACAGTTACTGATTTTGTTAGGGTTAGAAAAAAATGTCAATTTTGCTCA
ATTTTTAGATACATACTGATTATGATTGTTCCTTGATACTGAATTTGTTA
TGGTTTTGAATTTCACACTTAACTAATTTAGTTCTTTGT
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