GT624404
EST Overview
Unigenes
This EST is part of the following unigenes:
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT624404 vs. TrEMBL
Match: D7TUH8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_17.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015912001 PE=4 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.000e-10 Identity = 33/51 (64.71%), Postives = 41/51 (80.39%), Query Frame = 2 Query: 2 TTIQQLLYQLEESIRMGHMVDHCDKLKKMLHGSLLNHLKILKVDSDDTISA 154 TTI++L QLEE I G+MVD CDKLKK+LH +LL HL +LKVDSDD +S+ Sbjct: 1451 TTIERLWCQLEEMISSGNMVDQCDKLKKLLHEALLRHLNLLKVDSDDALSS 1501
BLAST of GT624404 vs. TrEMBL
Match: Q9C811_ARATH (Putative uncharacterized protein F10C21.8 OS=Arabidopsis thaliana GN=At1g33410 PE=1 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.097e-8 Identity = 27/51 (52.94%), Postives = 42/51 (82.35%), Query Frame = 2 Query: 2 TTIQQLLYQLEESIRMGHMVDHCDKLKKMLHGSLLNHLKILKVDSDDTISA 154 TT+++L ++LE+++ G MV+ C KLK+ LH +LLNHLK+LKVDS+D +S+ Sbjct: 1406 TTVERLWWELEKTMNSGRMVEQCHKLKEQLHHALLNHLKLLKVDSNDAVSS 1456
BLAST of GT624404 vs. TrEMBL
Match: Q6YXW7_ORYSJ (Putative uncharacterized protein OSJNBa0064G16.1 OS=Oryza sativa subsp. japonica GN=OSJNBa0064G16.1 PE=4 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.872e-8 Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 2 Query: 2 TTIQQLLYQLEESIRMGHMVDHCDKLKKMLHGSLLNHLKILKVDSDDTISA 154 T I++L QLEE GH VD CD+LKK+LHGSL++HL+ + VDSDD +S+ Sbjct: 148 TAIERLWCQLEEMQNAGHSVDQCDRLKKLLHGSLMSHLQQVVVDSDDVLSS 198
BLAST of GT624404 vs. TrEMBL
Match: Q6YWF9_ORYSJ (Nucleoporin-like protein OS=Oryza sativa subsp. japonica GN=OSJNBb0018G11.20 PE=4 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.872e-8 Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 2 Query: 2 TTIQQLLYQLEESIRMGHMVDHCDKLKKMLHGSLLNHLKILKVDSDDTISA 154 T I++L QLEE GH VD CD+LKK+LHGSL++HL+ + VDSDD +S+ Sbjct: 1326 TAIERLWCQLEEMQNAGHSVDQCDRLKKLLHGSLISHLQQVVVDSDDVLSS 1376
BLAST of GT624404 vs. TrEMBL
Match: D7KII4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_473514 PE=4 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.872e-8 Identity = 26/51 (50.98%), Postives = 42/51 (82.35%), Query Frame = 2 Query: 2 TTIQQLLYQLEESIRMGHMVDHCDKLKKMLHGSLLNHLKILKVDSDDTISA 154 TT+++L ++LE+++ G M++ C KLK+ LH +LLNHLK+LKVDS+D +S+ Sbjct: 1404 TTVERLWWELEKTMNSGRMLEQCQKLKEQLHQALLNHLKLLKVDSNDAVSS 1454
BLAST of GT624404 vs. TrEMBL
Match: A2X0T0_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05813 PE=4 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.872e-8 Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 2 Query: 2 TTIQQLLYQLEESIRMGHMVDHCDKLKKMLHGSLLNHLKILKVDSDDTISA 154 T I++L QLEE GH VD CD+LKK+LHGSL++HL+ + VDSDD +S+ Sbjct: 1326 TAIERLWCQLEEMQNAGHSVDQCDRLKKLLHGSLISHLQQVVVDSDDVLSS 1376
BLAST of GT624404 vs. TrEMBL
Match: C0PNX3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 9.290e-8 Identity = 27/51 (52.94%), Postives = 39/51 (76.47%), Query Frame = 2 Query: 2 TTIQQLLYQLEESIRMGHMVDHCDKLKKMLHGSLLNHLKILKVDSDDTISA 154 T +++L QL E R GH VD CD+LKK+LHG+L++HL+ + VDSDD +S+ Sbjct: 250 TAVERLWCQLGEMQRAGHSVDQCDRLKKLLHGALMSHLQQVVVDSDDVLSS 300
BLAST of GT624404 vs. TrEMBL
Match: C5XUK4_SORBI (Putative uncharacterized protein Sb04g003290 OS=Sorghum bicolor GN=Sb04g003290 PE=4 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 6.022e-7 Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 2 Query: 2 TTIQQLLYQLEESIRMGHMVDHCDKLKKMLHGSLLNHLKILKVDSDDTISA 154 T +++L QL E R GH VD CD+LKK+LHG+L++HL+ + VDS D +S+ Sbjct: 542 TAVERLWCQLGEMQRAGHSVDQCDRLKKLLHGALMSHLQQVVVDSGDVLSS 592
BLAST of GT624404 vs. TAIR peptide
Match: AT1G33410.2 (| Symbols: SAR1 | SUPPRESSOR OF AUXIN RESISTANCE1 | chr1:12109769-12118828 REVERSE LENGTH=1504) HSP 1 Score: 64.3142 bits (155), Expect = 7.441e-11 Identity = 27/51 (52.94%), Postives = 42/51 (82.35%), Query Frame = 2 Query: 2 TTIQQLLYQLEESIRMGHMVDHCDKLKKMLHGSLLNHLKILKVDSDDTISA 154 TT+++L ++LE+++ G MV+ C KLK+ LH +LLNHLK+LKVDS+D +S+ Sbjct: 1451 TTVERLWWELEKTMNSGRMVEQCHKLKEQLHHALLNHLKLLKVDSNDAVSS 1501
BLAST of GT624404 vs. TAIR peptide
Match: AT1G33410.1 (| Symbols: SAR1, NUP160, ATNUP160 | SUPPRESSOR OF AUXIN RESISTANCE1 | chr1:12109769-12118828 REVERSE LENGTH=1504) HSP 1 Score: 64.3142 bits (155), Expect = 7.441e-11 Identity = 27/51 (52.94%), Postives = 42/51 (82.35%), Query Frame = 2 Query: 2 TTIQQLLYQLEESIRMGHMVDHCDKLKKMLHGSLLNHLKILKVDSDDTISA 154 TT+++L ++LE+++ G MV+ C KLK+ LH +LLNHLK+LKVDS+D +S+ Sbjct: 1451 TTVERLWWELEKTMNSGRMVEQCHKLKEQLHHALLNHLKLLKVDSNDAVSS 1501 The following BLAST results are available for this feature:
BLAST of GT624404 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 8
BLAST of GT624404 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT624404 ID=GT624404; Name=GT624404; organism=Lens culinaris; type=EST; length=709bpback to top |