GT620762

EST Overview
NameGT620762
Unique NameGT620762
TypeEST
OrganismLens culinaris (lentil)
Sequence length771
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT620762 vs. TrEMBL
Match: D7U318_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028357001 PE=4 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.715e-35
Identity = 86/166 (51.81%), Postives = 94/166 (56.63%), Query Frame = 2
Query:    2 YDIELTVGDAVMENSFSRLLGHVELDLXXXXXXXXXXXXXXVDPYSRYGPKAEINHIFRVPEKRPPQKXXXXXXXXXXXXXXXXXXXXXRLGVNLKNFPGSTVPATFATXXXXXXXXXXXXXXXXXXXXXXFTTLKILGLLGAFTMFFGHRILSYLALTSSKLKSA 499
            YDI+LTVGDAVMENSF + LGHVELDL              VD Y RYGPKAEI HIFR PEK PP++                     RLGVNLKNFP S VPATFA                       FTTLKILGLLG F +F GHR+LS+LA  S+KLKSA
Sbjct:  591 YDIQLTVGDAVMENSFLQALGHVELDLPEPPEKAPRPPPQPVDSYLRYGPKAEIAHIFRAPEKLPPEQLSLAFLSLTILPLIVFLIGLLRLGVNLKNFPTSVVPATFAILFHLGLAAVLLLYVLFWWKLDLFTTLKILGLLGVFLLFVGHRLLSHLASASAKLKSA 756          
BLAST of GT620762 vs. TrEMBL
Match: B9SV32_RICCO (Ribophorin II, putative OS=Ricinus communis GN=RCOM_0260320 PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 5.213e-34
Identity = 83/166 (50.00%), Postives = 93/166 (56.02%), Query Frame = 2
Query:    2 YDIELTVGDAVMENSFSRLLGHVELDLXXXXXXXXXXXXXXVDPYSRYGPKAEINHIFRVPEKRPPQKXXXXXXXXXXXXXXXXXXXXXRLGVNLKNFPGSTVPATFATXXXXXXXXXXXXXXXXXXXXXXFTTLKILGLLGAFTMFFGHRILSYLALTSSKLKSA 499
            Y I+LTVGDAVMENSF +++GHV+LDL              V+PY RYGPKAEI HIFR PEK PP++                     RLGVNLKNFP S V ATFA                       FTT+K LG LG F MF GHRILS+LA TSSKLKSA
Sbjct:  534 YTIQLTVGDAVMENSFLKVIGHVDLDLPEAPENAPRPPPQPVEPYLRYGPKAEITHIFRAPEKLPPKELSLTFLGLTLLPFIGFLVGLLRLGVNLKNFPSSAVSATFAFLFHFGIAAVLFLYVLFWLKLDLFTTMKTLGFLGVFLMFVGHRILSHLASTSSKLKSA 699          
BLAST of GT620762 vs. TrEMBL
Match: B9H8P2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_818727 PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 7.528e-33
Identity = 81/166 (48.80%), Postives = 94/166 (56.63%), Query Frame = 2
Query:    2 YDIELTVGDAVMENSFSRLLGHVELDLXXXXXXXXXXXXXXVDPYSRYGPKAEINHIFRVPEKRPPQKXXXXXXXXXXXXXXXXXXXXXRLGVNLKNFPGSTVPATFATXXXXXXXXXXXXXXXXXXXXXXFTTLKILGLLGAFTMFFGHRILSYLALTSSKLKSA 499
            Y+++LTVGDAVMENSF + +GH++LDL              +DP   YGPKAEI HIFRVPEK PP++                     RLGVNLKNFP S+VPA FA                       FTTLK LG LGAF MF GHRILS+LA +SSKLKSA
Sbjct:  530 YNVQLTVGDAVMENSFLKAVGHIDLDLPEAPEKAPQPPAQPLDPNLIYGPKAEIAHIFRVPEKLPPKELSLTFLGLTLLPFLGFLLGLLRLGVNLKNFPSSSVPAMFAALFHLGIAAVLLLYVLFWLKLDLFTTLKALGFLGAFLMFVGHRILSHLASSSSKLKSA 695          
BLAST of GT620762 vs. TrEMBL
Match: B9GRP4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_830072 PE=4 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.860e-32
Identity = 80/166 (48.19%), Postives = 92/166 (55.42%), Query Frame = 2
Query:    2 YDIELTVGDAVMENSFSRLLGHVELDLXXXXXXXXXXXXXXVDPYSRYGPKAEINHIFRVPEKRPPQKXXXXXXXXXXXXXXXXXXXXXRLGVNLKNFPGSTVPATFATXXXXXXXXXXXXXXXXXXXXXXFTTLKILGLLGAFTMFFGHRILSYLALTSSKLKSA 499
            Y+++LTVGDA MENSF + +GH++LDL              +D   RYGPKAEI HIFRVPEK PP++                     RLGVNLKNFP S+VPA FA                       FTTLK LG LGAF MF GHRILS+LA  SSKLKSA
Sbjct:  529 YNVQLTVGDAAMENSFLKAIGHLDLDLPEPPEKAPQPPPQPLDQNLRYGPKAEITHIFRVPEKLPPKELSHAFLGLTLFPLLGFLVGLLRLGVNLKNFPSSSVPAMFAVLFHLGIAAVLLLYALFWLKWDLFTTLKALGFLGAFLMFVGHRILSHLASMSSKLKSA 694          
BLAST of GT620762 vs. TrEMBL
Match: B4FXY5_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.860e-32
Identity = 79/166 (47.59%), Postives = 92/166 (55.42%), Query Frame = 2
Query:    2 YDIELTVGDAVMENSFSRLLGHVELDLXXXXXXXXXXXXXXVDPYSRYGPKAEINHIFRVPEKRPPQKXXXXXXXXXXXXXXXXXXXXXRLGVNLKNFPGSTVPATFATXXXXXXXXXXXXXXXXXXXXXXFTTLKILGLLGAFTMFFGHRILSYLALTSSKLKSA 499
            YD+ELTVGDAVMENSF R LGH+ELDL              VDP+S++GPKAEI+HIFR PEKRPP++                     RLGVNLKNFP    PA FA+                      FTTLK LG LG F +F GHR LSYL+  S+K K+A
Sbjct:  527 YDLELTVGDAVMENSFLRPLGHLELDLPDAPEKAPRPPAQAVDPFSKFGPKAEISHIFRAPEKRPPKELSLAFTGLTLLPFIGFLIGLVRLGVNLKNFPSLPGPAAFASLFHAGIGAVLMLYVLFWIKLDLFTTLKYLGFLGIFLVFVGHRALSYLSSVSTKQKTA 692          
BLAST of GT620762 vs. TrEMBL
Match: Q5N7W3_ORYSJ (Os01g0911200 protein OS=Oryza sativa subsp. japonica GN=P0470A12.10 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 3.163e-31
Identity = 76/166 (45.78%), Postives = 89/166 (53.61%), Query Frame = 2
Query:    2 YDIELTVGDAVMENSFSRLLGHVELDLXXXXXXXXXXXXXXVDPYSRYGPKAEINHIFRVPEKRPPQKXXXXXXXXXXXXXXXXXXXXXRLGVNLKNFPGSTVPATFATXXXXXXXXXXXXXXXXXXXXXXFTTLKILGLLGAFTMFFGHRILSYLALTSSKLKSA 499
            YD+EL VGDA MENSF R LGH+ELDL              VDP+S++GPK EI+HIFR PEKRPP++                     RLGVNLKNFP    PA FA+                      FTTLK L  LG F +F GHR LSYL+ TS+K K+A
Sbjct:  533 YDLELAVGDAAMENSFLRALGHIELDLPEAPEKAPKPPAQAVDPFSKFGPKKEISHIFRSPEKRPPKELSFAFTGLTLLPIVGFLIGLMRLGVNLKNFPSLPAPAAFASLFHAGIGAVLLLYVLFWIKLDLFTTLKYLSFLGVFLVFVGHRALSYLSSTSAKQKTA 698          
BLAST of GT620762 vs. TrEMBL
Match: B9EVI1_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_04502 PE=4 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 3.163e-31
Identity = 76/166 (45.78%), Postives = 89/166 (53.61%), Query Frame = 2
Query:    2 YDIELTVGDAVMENSFSRLLGHVELDLXXXXXXXXXXXXXXVDPYSRYGPKAEINHIFRVPEKRPPQKXXXXXXXXXXXXXXXXXXXXXRLGVNLKNFPGSTVPATFATXXXXXXXXXXXXXXXXXXXXXXFTTLKILGLLGAFTMFFGHRILSYLALTSSKLKSA 499
            YD+EL VGDA MENSF R LGH+ELDL              VDP+S++GPK EI+HIFR PEKRPP++                     RLGVNLKNFP    PA FA+                      FTTLK L  LG F +F GHR LSYL+ TS+K K+A
Sbjct:  456 YDLELAVGDAAMENSFLRALGHIELDLPEAPEKAPKPPAQAVDPFSKFGPKKEISHIFRSPEKRPPKELSFAFTGLTLLPIVGFLIGLMRLGVNLKNFPSLPAPAAFASLFHAGIGAVLLLYVLFWIKLDLFTTLKYLSFLGVFLVFVGHRALSYLSSTSAKQKTA 621          
BLAST of GT620762 vs. TrEMBL
Match: B8A840_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04877 PE=4 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 3.163e-31
Identity = 76/166 (45.78%), Postives = 89/166 (53.61%), Query Frame = 2
Query:    2 YDIELTVGDAVMENSFSRLLGHVELDLXXXXXXXXXXXXXXVDPYSRYGPKAEINHIFRVPEKRPPQKXXXXXXXXXXXXXXXXXXXXXRLGVNLKNFPGSTVPATFATXXXXXXXXXXXXXXXXXXXXXXFTTLKILGLLGAFTMFFGHRILSYLALTSSKLKSA 499
            YD+EL VGDA MENSF R LGH+ELDL              VDP+S++GPK EI+HIFR PEKRPP++                     RLGVNLKNFP    PA FA+                      FTTLK L  LG F +F GHR LSYL+ TS+K K+A
Sbjct:  533 YDLELAVGDAAMENSFLRALGHIELDLPEAPEKAPKPPAQAVDPFSKFGPKKEISHIFRSPEKRPPKELSFVFTGLTLLPIVGFLIGLMRLGVNLKNFPSLPAPAAFASLFHAGIGAVLLLYVLFWIKLDLFTTLKYLSFLGVFLVFVGHRALSYLSSTSAKQKTA 698          
BLAST of GT620762 vs. TrEMBL
Match: B8A0P7_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.050e-30
Identity = 76/166 (45.78%), Postives = 89/166 (53.61%), Query Frame = 2
Query:    2 YDIELTVGDAVMENSFSRLLGHVELDLXXXXXXXXXXXXXXVDPYSRYGPKAEINHIFRVPEKRPPQKXXXXXXXXXXXXXXXXXXXXXRLGVNLKNFPGSTVPATFATXXXXXXXXXXXXXXXXXXXXXXFTTLKILGLLGAFTMFFGHRILSYLALTSSKLKSA 499
            YD+EL VGDA MENSF R LGH+ELDL              VDP+S++GPKAEI HIFR PEKRPP++                     RLGVN+KNFP    PA FA+                      FTTLK LG LG F +F GHR LSYL+  S+K K+A
Sbjct:  526 YDLELAVGDAAMENSFLRPLGHLELDLPEAPEKAPRPPAQAVDPFSKFGPKAEILHIFRAPEKRPPKELSLAFTGLTLLPFIGFLIGLVRLGVNVKNFPSLPGPAAFASVFHAGIGAVLLLYVLFWLKLDLFTTLKYLGFLGIFLVFVGHRTLSYLSSASAKQKTA 691          
BLAST of GT620762 vs. TrEMBL
Match: C5XFL4_SORBI (Putative uncharacterized protein Sb03g043460 OS=Sorghum bicolor GN=Sb03g043460 PE=4 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.329e-29
Identity = 75/166 (45.18%), Postives = 88/166 (53.01%), Query Frame = 2
Query:    2 YDIELTVGDAVMENSFSRLLGHVELDLXXXXXXXXXXXXXXVDPYSRYGPKAEINHIFRVPEKRPPQKXXXXXXXXXXXXXXXXXXXXXRLGVNLKNFPGSTVPATFATXXXXXXXXXXXXXXXXXXXXXXFTTLKILGLLGAFTMFFGHRILSYLALTSSKLKSA 499
            YD+EL VGDA MENSF R LGH++LDL              VDP+S++GPKAEI HIFR PEKRPP++                     RLGVNLKNFP    PA FA+                      FTTLK LG L  F +F GHR LSYL+  S+K K+A
Sbjct:  528 YDLELAVGDAAMENSFLRSLGHLDLDLPEAPEKAPRPPAQAVDPFSKFGPKAEIAHIFRAPEKRPPKELSLAFTGLTLLPFIGFLIGLMRLGVNLKNFPSLPGPAAFASLFHAGVGAVLLLYVLFWLKLDLFTTLKYLGFLVIFLVFVGHRTLSYLSSVSTKQKTA 693          
BLAST of GT620762 vs. TAIR peptide
Match: AT4G21150.3 (| Symbols: HAP6 | ribophorin II (RPN2) family protein | chr4:11278646-11283599 FORWARD LENGTH=691)

HSP 1 Score: 126.331 bits (316), Expect = 1.807e-29
Identity = 72/166 (43.37%), Postives = 86/166 (51.81%), Query Frame = 2
Query:    2 YDIELTVGDAVMENSFSRLLGHVELDLXXXXXXXXXXXXXXVDPYSRYGPKAEINHIFRVPEKRPPQKXXXXXXXXXXXXXXXXXXXXXRLGVNLKNFPGSTVPATFATXXXXXXXXXXXXXXXXXXXXXXFTTLKILGLLGAFTMFFGHRILSYLALTSSKLKSA 499
            Y+I+LT+GDA MENS    +GH+ELDL               +PYSRYGPKAEI+HIFR+PEK P ++                     RLGVN+K+FP ST  A  A                       FTTLK L LLG F +F GHR LS LA  S+KLKSA
Sbjct:  526 YEIQLTIGDASMENSLLSNIGHIELDLPERPEKATRPPLQSTEPYSRYGPKAEISHIFRIPEKLPAKQLSLVFLGVIVLPFIGFLIGLTRLGVNIKSFPSSTGSAISALLFHCGIGAVLLLYVLFWLKLDLFTTLKALSLLGVFLLFVGHRTLSQLASASNKLKSA 691          
BLAST of GT620762 vs. TAIR peptide
Match: AT4G21150.2 (| Symbols: HAP6 | ribophorin II (RPN2) family protein | chr4:11278649-11283599 FORWARD LENGTH=678)

HSP 1 Score: 126.331 bits (316), Expect = 1.807e-29
Identity = 72/166 (43.37%), Postives = 86/166 (51.81%), Query Frame = 2
Query:    2 YDIELTVGDAVMENSFSRLLGHVELDLXXXXXXXXXXXXXXVDPYSRYGPKAEINHIFRVPEKRPPQKXXXXXXXXXXXXXXXXXXXXXRLGVNLKNFPGSTVPATFATXXXXXXXXXXXXXXXXXXXXXXFTTLKILGLLGAFTMFFGHRILSYLALTSSKLKSA 499
            Y+I+LT+GDA MENS    +GH+ELDL               +PYSRYGPKAEI+HIFR+PEK P ++                     RLGVN+K+FP ST  A  A                       FTTLK L LLG F +F GHR LS LA  S+KLKSA
Sbjct:  513 YEIQLTIGDASMENSLLSNIGHIELDLPERPEKATRPPLQSTEPYSRYGPKAEISHIFRIPEKLPAKQLSLVFLGVIVLPFIGFLIGLTRLGVNIKSFPSSTGSAISALLFHCGIGAVLLLYVLFWLKLDLFTTLKALSLLGVFLLFVGHRTLSQLASASNKLKSA 678          
BLAST of GT620762 vs. TAIR peptide
Match: AT4G21150.1 (| Symbols: HAP6 | ribophorin II (RPN2) family protein | chr4:11278646-11283599 FORWARD LENGTH=691)

HSP 1 Score: 126.331 bits (316), Expect = 1.807e-29
Identity = 72/166 (43.37%), Postives = 86/166 (51.81%), Query Frame = 2
Query:    2 YDIELTVGDAVMENSFSRLLGHVELDLXXXXXXXXXXXXXXVDPYSRYGPKAEINHIFRVPEKRPPQKXXXXXXXXXXXXXXXXXXXXXRLGVNLKNFPGSTVPATFATXXXXXXXXXXXXXXXXXXXXXXFTTLKILGLLGAFTMFFGHRILSYLALTSSKLKSA 499
            Y+I+LT+GDA MENS    +GH+ELDL               +PYSRYGPKAEI+HIFR+PEK P ++                     RLGVN+K+FP ST  A  A                       FTTLK L LLG F +F GHR LS LA  S+KLKSA
Sbjct:  526 YEIQLTIGDASMENSLLSNIGHIELDLPERPEKATRPPLQSTEPYSRYGPKAEISHIFRIPEKLPAKQLSLVFLGVIVLPFIGFLIGLTRLGVNIKSFPSSTGSAISALLFHCGIGAVLLLYVLFWLKLDLFTTLKALSLLGVFLLFVGHRTLSQLASASNKLKSA 691          
The following BLAST results are available for this feature:
BLAST of GT620762 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7U318_VITVI4.715e-3551.81Whole genome shotgun sequence of line PN40024, sca... [more]
B9SV32_RICCO5.213e-3450.00Ribophorin II, putative OS=Ricinus communis GN=RCO... [more]
B9H8P2_POPTR7.528e-3348.80Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GRP4_POPTR2.860e-3248.19Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B4FXY5_MAIZE2.860e-3247.59Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
Q5N7W3_ORYSJ3.163e-3145.78Os01g0911200 protein OS=Oryza sativa subsp. japoni... [more]
B9EVI1_ORYSJ3.163e-3145.78Putative uncharacterized protein OS=Oryza sativa s... [more]
B8A840_ORYSI3.163e-3145.78Putative uncharacterized protein OS=Oryza sativa s... [more]
B8A0P7_MAIZE2.050e-3045.78Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
C5XFL4_SORBI1.329e-2945.18Putative uncharacterized protein Sb03g043460 OS=So... [more]
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BLAST of GT620762 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT4G21150.31.807e-2943.37| Symbols: HAP6 | ribophorin II (RPN2) family prot... [more]
AT4G21150.21.807e-2943.37| Symbols: HAP6 | ribophorin II (RPN2) family prot... [more]
AT4G21150.11.807e-2943.37| Symbols: HAP6 | ribophorin II (RPN2) family prot... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008814Ribophorin IIPANTHERPTHR12640RIBOPHORIN IIcoord: 1..163
score: 4.8
IPR008814Ribophorin IIPFAMPF05817Ribophorin_IIcoord: 1..159
score: 2
NoneNo IPR availableSEGsegsegcoord: 28..41
score: NAcoord: 69..89
score: NAcoord: 110..131
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT620762 ID=GT620762; Name=GT620762; organism=Lens culinaris; type=EST; length=771bp
GTATGACATTGAGCTGACTGTTGGTGATGCTGTCATGGAGAACTCCTTCT
CACGACTCCTGGGTCATGTCGAATTAGATCTTCCAGAAGCTCCCGAGAAA
GCAGCGCGTCCTCCTCCACCACCTGTTGATCCTTACTCAAGATATGGGCC
CAAAGCAGAGATTAACCACATATTCAGGGTGCCTGAAAAGCGACCACCCC
AGAAACTTTCTCTCGTATTTTTGGGTTTGATCCTTTTGCCATTCATCGGC
TTTTTGGTTGGGTTGTTACGTTTGGGGGTGAACCTGAAGAATTTCCCTGG
TTCAACAGTACCCGCTACATTTGCCACCCTTTTCCATCTTGGTCTTGCCG
CAGTTCTGTTGCTATATGTACTTTTCTGGTTGAAGCTGGATCTATTTACC
ACACTCAAAATACTTGGCCTTTTGGGAGCTTTTACGATGTTTTTCGGACA
CAGGATTCTTTCCTATCTTGCTTTAACATCGTCCAAGTTGAAATCTGCAT
GAGTGTAACAGATAATGTCTATTTATAAAGAGATAGGAGTATTTAAGTTT
TTTCTTTAGAGAAATGGTACTAATCAAATTTTGTAGATTTGTTGTATTAT
GTGATCTGACAAATTAGAGATCATTATATTGCACGAGGAGAGCTTTAACT
TGATTTGTTCAGAAAAAGCCATGGACACAAACAACCTGTTTAAGCATATG
CTACCTCCCTTAGATGTTATGTAGTATTATGTATAAGCTTTGGCTAATTC
GAGACTTCATTTATGCTTTCG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0004579dolichyl-diphosphooligosaccharide-protein glycotransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005789endoplasmic reticulum membrane
GO:0008250oligosaccharyltransferase complex
Vocabulary: Biological Process
TermDefinition
GO:0018279protein N-linked glycosylation via asparagine
Vocabulary: INTERPRO
TermDefinition
IPR008814Swp1