GT624380

EST Overview
NameGT624380
Unique NameGT624380
TypeEST
OrganismLens culinaris (lentil)
Sequence length810
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT624380 vs. TrEMBL
Match: A9PCR1_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 399.053 bits (1024), Expect = 2.419e-109
Identity = 176/223 (78.92%), Postives = 198/223 (88.79%), Query Frame = 3
Query:  141 SPCKTSCGTIPINYPFALEDGCGSPQFRQMFNCTTTDLFFQTPSGSYKVQSIDYTKKTMTLYDPSMSTCSILQPHHDFIMTDIQSAIIPPSQDTVFVLLNCSIDSPVLNHYKYLCFNFEGHTCDELYGGCNAFRVFHLLTNSSPPCCFTSYNTVKFMSMNILDCTHYTSVFNSDKLRGVGPLDWVYGIKLSFSVPDIGCESCKQSGGTCGFDTDTQGLLCLCS 809
            +PC+TSCG+I INYPF ++DGCG+PQFR M NC+T DLFF TPSG YKVQ IDY KKTMT+YDP+MSTCSILQPHHDFIMTDIQS  IPP+ DTVF LLNCSIDSPVLNHYK LCF+F GH+CDELYG CNAFRVFHLLTNSSPPCCFT Y+TVKFM MNILDCTHYT+V N+D LRG+GPLDWVYGIKLSF+VP+ GCE C QSGGTCG+DT+T+ + CLCS
Sbjct:   29 TPCRTSCGSIAINYPFGIDDGCGAPQFRSMLNCST-DLFFLTPSGGYKVQHIDYDKKTMTIYDPAMSTCSILQPHHDFIMTDIQSVTIPPTPDTVFALLNCSIDSPVLNHYKNLCFDFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFMRMNILDCTHYTTVINTDNLRGIGPLDWVYGIKLSFTVPETGCERCSQSGGTCGYDTETEVMTCLCS 250          
BLAST of GT624380 vs. TrEMBL
Match: B9HII5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_564336 PE=4 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 5.959e-108
Identity = 174/223 (78.03%), Postives = 197/223 (88.34%), Query Frame = 3
Query:  141 SPCKTSCGTIPINYPFALEDGCGSPQFRQMFNCTTTDLFFQTPSGSYKVQSIDYTKKTMTLYDPSMSTCSILQPHHDFIMTDIQSAIIPPSQDTVFVLLNCSIDSPVLNHYKYLCFNFEGHTCDELYGGCNAFRVFHLLTNSSPPCCFTSYNTVKFMSMNILDCTHYTSVFNSDKLRGVGPLDWVYGIKLSFSVPDIGCESCKQSGGTCGFDTDTQGLLCLCS 809
            +PC+TSCG+I INYPF ++DGCG+PQFR M NC+T DLFF TPSG YKVQ IDY KKTMT+YDP+MSTCSILQPHHDFIMTDIQS  I P+ DTVF LLNCSIDSPVLNHYK LCF+F GH+CDELYG CNAFRVFHLLTNSSPPCCFT Y+TVKFMSMNILDCTHYT+V N+D L G+ P DWVYGIKLS+SVP+ GCE C QSGGTCG+DT+T+G++CLCS
Sbjct:   26 TPCRTSCGSIAINYPFGIDDGCGAPQFRHMLNCST-DLFFLTPSGDYKVQHIDYDKKTMTIYDPAMSTCSILQPHHDFIMTDIQSVTISPTPDTVFALLNCSIDSPVLNHYKNLCFSFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFMSMNILDCTHYTTVINTDSLMGIVPSDWVYGIKLSYSVPETGCERCSQSGGTCGYDTETEGMMCLCS 247          
BLAST of GT624380 vs. TrEMBL
Match: B9RZX9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1002880 PE=4 SV=1)

HSP 1 Score: 393.66 bits (1010), Expect = 1.016e-107
Identity = 172/221 (77.83%), Postives = 198/221 (89.59%), Query Frame = 3
Query:  147 CKTSCGTIPINYPFALEDGCGSPQFRQMFNCTTTDLFFQTPSGSYKVQSIDYTKKTMTLYDPSMSTCSILQPHHDFIMTDIQSAIIPPSQDTVFVLLNCSIDSPVLNHYKYLCFNFEGHTCDELYGGCNAFRVFHLLTNSSPPCCFTSYNTVKFMSMNILDCTHYTSVFNSDKLRGVGPLDWVYGIKLSFSVPDIGCESCKQSGGTCGFDTDTQGLLCLCS 809
            C+TSCG + I YPF ++DGCG+PQFR MFNC+  DLFF TPSGSYKVQ IDY KKT+ +YDP+MSTCSILQPHHDF+M+DIQS++IPP+ DTVF LLNCSIDSPVLNHYK LCFNF GH+CDELYG CNAFRVFHLLTNSSPPCCFT Y+TV++MSMNILDCTHYT+V N+D L+G+GPLDWVYGIKLS+S+PD GCE C QSGGTCGFDT+T G+LCLCS
Sbjct:   33 CRTSCGRVDIRYPFGVDDGCGAPQFRGMFNCSN-DLFFITPSGSYKVQQIDYEKKTIEVYDPAMSTCSILQPHHDFVMSDIQSSMIPPTPDTVFALLNCSIDSPVLNHYKNLCFNFSGHSCDELYGSCNAFRVFHLLTNSSPPCCFTGYDTVRYMSMNILDCTHYTTVVNTDNLKGIGPLDWVYGIKLSYSMPDTGCERCSQSGGTCGFDTETGGMLCLCS 252          
BLAST of GT624380 vs. TrEMBL
Match: D7T675_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017668001 PE=4 SV=1)

HSP 1 Score: 382.104 bits (980), Expect = 3.061e-104
Identity = 162/222 (72.97%), Postives = 199/222 (89.64%), Query Frame = 3
Query:  144 PCKTSCGTIPINYPFALEDGCGSPQFRQMFNCTTTDLFFQTPSGSYKVQSIDYTKKTMTLYDPSMSTCSILQPHHDFIMTDIQSAIIPPSQDTVFVLLNCSIDSPVLNHYKYLCFNFEGHTCDELYGGCNAFRVFHLLTNSSPPCCFTSYNTVKFMSMNILDCTHYTSVFNSDKLRGVGPLDWVYGIKLSFSVPDIGCESCKQSGGTCGFDTDTQGLLCLCS 809
            PC++ CGTIP+ YPF +++GCG+PQ++ M NC+T DLFF TPSG+YKVQ+IDY KKTM +YDP+MSTCSILQPHHDF+M+DIQSA+IPP+ DTVFVLLNCSIDSPVLNHYK LCFNF GH+CDELY  C +F++FHLL+NSSPPCCFT Y+TVK+MSMNILDC+HYTSV+++D L+G+GPLDW YGIKLS+++PD GCE C +SGGTCGFDT T+G LC+CS
Sbjct:   30 PCRSFCGTIPVKYPFGVDEGCGAPQYKGMLNCST-DLFFLTPSGNYKVQAIDYDKKTMVVYDPAMSTCSILQPHHDFLMSDIQSAMIPPASDTVFVLLNCSIDSPVLNHYKSLCFNFSGHSCDELYSACTSFKLFHLLSNSSPPCCFTGYDTVKYMSMNILDCSHYTSVYDTDGLKGIGPLDWSYGIKLSYAIPDTGCERCTRSGGTCGFDTQTEGTLCICS 250          
BLAST of GT624380 vs. TrEMBL
Match: C6TFA5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 1.469e-94
Identity = 163/204 (79.90%), Postives = 175/204 (85.78%), Query Frame = 3
Query:   60 LPPPFTIIKLVXXXXXXXXXXXXXXXXSPCKTSCGTIPINYPFALEDGCGSPQFRQMFNCTTTDLFFQTPSGSYKVQSIDYTKKTMTLYDPSMSTCSILQPHHDFIMTDIQSAIIPPSQDTVFVLLNCSIDSPVLNHYKYLCFNFEGHTCDELYGGCNAFRVFHLLTNSSPPCCFTSYNTVKFMSMNILDCTHYTSVFNSDKLR 671
            L  PFTI KL+                SPCKT+CG+IPINYPF LEDGCG+PQFR M NC+T DLFFQTPSGSYKVQSIDY KKTM +YDPS+STCSILQPHHDF MTD+QSAIIPPSQDTVFVLLNCSIDSPVLNHYKYLCFNF GHTCDELYG CNAFRVFHLLTNSSPPCCFTSY+TVKFMSMNILDCTHYTS+FN+D L+
Sbjct:    6 LSSPFTIFKLLILTLLLQVIPTLTL--SPCKTTCGSIPINYPFGLEDGCGAPQFRHMLNCST-DLFFQTPSGSYKVQSIDYDKKTMVIYDPSLSTCSILQPHHDFQMTDVQSAIIPPSQDTVFVLLNCSIDSPVLNHYKYLCFNFAGHTCDELYGSCNAFRVFHLLTNSSPPCCFTSYSTVKFMSMNILDCTHYTSMFNTDNLK 206          

HSP 2 Score: 25.409 bits (54), Expect = 1.469e-94
Identity = 11/15 (73.33%), Postives = 12/15 (80.00%), Query Frame = 1
Query:  691 GFMGLNFLLVCPILD 735
            GFMG +FL VC ILD
Sbjct:  213 GFMGSSFLSVCLILD 227          
BLAST of GT624380 vs. TrEMBL
Match: B9HX90_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_822247 PE=4 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 4.898e-94
Identity = 156/194 (80.41%), Postives = 172/194 (88.66%), Query Frame = 3
Query:  228 MFNCTTTDLFFQTPSGSYKVQSIDYTKKTMTLYDPSMSTCSILQPHHDFIMTDIQSAIIPPSQDTVFVLLNCSIDSPVLNHYKYLCFNFEGHTCDELYGGCNAFRVFHLLTNSSPPCCFTSYNTVKFMSMNILDCTHYTSVFNSDKLRGVGPLDWVYGIKLSFSVPDIGCESCKQSGGTCGFDTDTQGLLCLCS 809
            M NC+T DLFF TPSG YKVQ IDY KKTMT+YDP+MSTCSILQPHHDFIMTDIQS  IPP+ DTVF LLNCSIDSPVLNHYK LCF+F GH+CDELYG CNAFRVFHLLTNSSPPCCFT Y+TVKFM MNILDCTHYT+V N+D LRG+GPLDWVYGIKLSF+VP+ GCE C QSGGTCG+DT+T+ + CLCS
Sbjct:    1 MLNCST-DLFFLTPSGGYKVQHIDYDKKTMTIYDPAMSTCSILQPHHDFIMTDIQSVTIPPTPDTVFALLNCSIDSPVLNHYKNLCFDFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFMRMNILDCTHYTTVINTDNLRGIGPLDWVYGIKLSFTVPETGCERCSQSGGTCGYDTETEVMTCLCS 193          
BLAST of GT624380 vs. TrEMBL
Match: A9P8X3_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 1.206e-92
Identity = 154/194 (79.38%), Postives = 171/194 (88.14%), Query Frame = 3
Query:  228 MFNCTTTDLFFQTPSGSYKVQSIDYTKKTMTLYDPSMSTCSILQPHHDFIMTDIQSAIIPPSQDTVFVLLNCSIDSPVLNHYKYLCFNFEGHTCDELYGGCNAFRVFHLLTNSSPPCCFTSYNTVKFMSMNILDCTHYTSVFNSDKLRGVGPLDWVYGIKLSFSVPDIGCESCKQSGGTCGFDTDTQGLLCLCS 809
            M NC+T DLFF TPSG YKVQ IDY KKTMT+YDP+MSTCSILQPHHDFIMTDIQS  I P+ DTVF LLNCSIDSPVLNHYK LCF+F GH+CDELYG CNAFRVFHLLTNSSPPCCFT Y+TVKFMSMNILDCTHYT+V N+D L G+ P DWVYGIKLS+SVP+ GCE C QSGGTCG+DT+T+G++CLCS
Sbjct:    1 MLNCST-DLFFLTPSGDYKVQHIDYDKKTMTIYDPAMSTCSILQPHHDFIMTDIQSVTISPTPDTVFALLNCSIDSPVLNHYKNLCFSFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFMSMNILDCTHYTTVINTDSLMGIVPSDWVYGIKLSYSVPETGCERCSQSGGTCGYDTETEGMMCLCS 193          
BLAST of GT624380 vs. TrEMBL
Match: D7L6R5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_341872 PE=4 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 2.515e-90
Identity = 151/228 (66.23%), Postives = 184/228 (80.70%), Query Frame = 3
Query:  147 CKTSCGTIPINYPFALEDGCGSPQFRQMFNCTTTDLFFQTPSGSYKVQSIDYTKKTMTLYDPSMSTCSILQPHHDFIMTDIQSAIIPPSQDTVFVLLNCSIDSPVLNHYKYLCFNFEGHTCDELYGGCNAFRVFHLLT-------NSSPPCCFTSYNTVKFMSMNILDCTHYTSVFNSDKLRGVGPLDWVYGIKLSFSVPDIGCESCKQSGGTCGFDTDTQGLLCLCS 809
            C+T CG IPINYPF ++ GCGSPQF+ MFNC+T DLFF TPSGSYKVQSIDY KKTM ++DP+MSTCSILQPHHDF M DIQ+A+I PS DTVF L NCS DSPV N Y+ LCFN  GH+CDELY  C +FR+F+  +       +++P CCFTSY+TV+ MSMNILDC+HYT+V ++ K+RGV PLDW YGI+LSFSVP+IGC+ C++SGGTCGFD +T+  LC CS
Sbjct:   30 CRTLCGNIPINYPFGIDGGCGSPQFKGMFNCST-DLFFTTPSGSYKVQSIDYEKKTMVIFDPAMSTCSILQPHHDFKMADIQNALIRPSYDTVFALFNCSNDSPVHNRYRNLCFNAAGHSCDELYSSCTSFRIFNTTSPSGNSTIHTTPYCCFTSYDTVRVMSMNILDCSHYTTVIDNGKMRGVAPLDWSYGIELSFSVPEIGCDRCRKSGGTCGFDAETEIFLCQCS 256          
BLAST of GT624380 vs. TrEMBL
Match: Q9LUT6_ARATH (Gb|AAD32889.1 OS=Arabidopsis thaliana GN=At3g17350 PE=4 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 1.803e-88
Identity = 147/229 (64.19%), Postives = 183/229 (79.91%), Query Frame = 3
Query:  147 CKTSCGTIPINYPFALEDGCGSPQFRQMFNCTTTDLFFQTPSGSYKVQSIDYTKKTMTLYDPSMSTCSILQPHHDFIMTDIQSAIIPPSQDTVFVLLNCSIDSPVLNHYKYLCFNFEGHTCDELYGGCNAFRVFHLLT--------NSSPPCCFTSYNTVKFMSMNILDCTHYTSVFNSDKLRGVGPLDWVYGIKLSFSVPDIGCESCKQSGGTCGFDTDTQGLLCLCS 809
            C+T CG IPINYPF ++ GCGSPQ+R MFNC+T DL+F TPSGSYKVQSIDY KKTM ++DP+MSTCSILQPHHDF M DIQ+ +I PS DTVF L NCS DSPV N Y+ LCFN  GH+CDELY  C +FR+F+  +        +++P CCFT+Y+TV+ MSMNILDC+HYT+V ++ K+RGVGPLDW YGI+LS+SV +IGC+ C++SGGTCGFD +T+  LC CS
Sbjct:   31 CRTLCGNIPINYPFGIDGGCGSPQYRGMFNCST-DLYFTTPSGSYKVQSIDYEKKTMVIFDPAMSTCSILQPHHDFKMADIQNTLIRPSYDTVFALFNCSNDSPVHNRYRNLCFNAAGHSCDELYSSCTSFRIFNTTSPYGNNSTVHTTPYCCFTNYDTVRVMSMNILDCSHYTTVIDNGKMRGVGPLDWSYGIELSYSVTEIGCDRCRKSGGTCGFDAETEIFLCQCS 258          
BLAST of GT624380 vs. TrEMBL
Match: B3VWZ0_POPTN (Expressed protein (Fragment) OS=Populus tremula PE=4 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 1.137e-66
Identity = 114/133 (85.71%), Postives = 124/133 (93.23%), Query Frame = 3
Query:  315 MTLYDPSMSTCSILQPHHDFIMTDIQSAIIPPSQDTVFVLLNCSIDSPVLNHYKYLCFNFEGHTCDELYGGCNAFRVFHLLTNSSPPCCFTSYNTVKFMSMNILDCTHYTSVFNSDKLRGVGPLDWVYGIKLS 713
            MT+YDP+MSTCSILQPHHDFIMTDIQS  IPP+ DTVF LLNCSIDSPVLNHYK LCF+F GH+CDELYG CNAFRVFHLLTNSSPPCCFT+Y+TVKFMSMNILDCTHYT+V N+D LRG+GPLDWVYGIKLS
Sbjct:    1 MTIYDPAMSTCSILQPHHDFIMTDIQSVTIPPTPDTVFALLNCSIDSPVLNHYKNLCFDFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTAYDTVKFMSMNILDCTHYTTVINTDNLRGIGPLDWVYGIKLS 133          
BLAST of GT624380 vs. TAIR peptide
Match: AT3G17350.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50290.1); Has 203 Blast hits to 203 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:5934111-5935276 FORWARD LENGTH=301)

HSP 1 Score: 329.717 bits (844), Expect = 1.154e-90
Identity = 147/229 (64.19%), Postives = 183/229 (79.91%), Query Frame = 3
Query:  147 CKTSCGTIPINYPFALEDGCGSPQFRQMFNCTTTDLFFQTPSGSYKVQSIDYTKKTMTLYDPSMSTCSILQPHHDFIMTDIQSAIIPPSQDTVFVLLNCSIDSPVLNHYKYLCFNFEGHTCDELYGGCNAFRVFHLLT--------NSSPPCCFTSYNTVKFMSMNILDCTHYTSVFNSDKLRGVGPLDWVYGIKLSFSVPDIGCESCKQSGGTCGFDTDTQGLLCLCS 809
            C+T CG IPINYPF ++ GCGSPQ+R MFNC+T DL+F TPSGSYKVQSIDY KKTM ++DP+MSTCSILQPHHDF M DIQ+ +I PS DTVF L NCS DSPV N Y+ LCFN  GH+CDELY  C +FR+F+  +        +++P CCFT+Y+TV+ MSMNILDC+HYT+V ++ K+RGVGPLDW YGI+LS+SV +IGC+ C++SGGTCGFD +T+  LC CS
Sbjct:   31 CRTLCGNIPINYPFGIDGGCGSPQYRGMFNCST-DLYFTTPSGSYKVQSIDYEKKTMVIFDPAMSTCSILQPHHDFKMADIQNTLIRPSYDTVFALFNCSNDSPVHNRYRNLCFNAAGHSCDELYSSCTSFRIFNTTSPYGNNSTVHTTPYCCFTNYDTVRVMSMNILDCSHYTTVIDNGKMRGVGPLDWSYGIELSYSVTEIGCDRCRKSGGTCGFDAETEIFLCQCS 258          
BLAST of GT624380 vs. TAIR peptide
Match: AT5G50290.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 300 Blast hits to 300 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:20461814-20463896 FORWARD LENGTH=303)

HSP 1 Score: 153.295 bits (386), Expect = 1.480e-37
Identity = 83/237 (35.02%), Postives = 130/237 (54.85%), Query Frame = 3
Query:  147 CKTSCGTIPINYPFALEDGCGSPQFRQMFNCTTTDLFFQTPSGSYKVQSIDYTKKTMTLYDPSMSTCSIL---QPHHDFIMTDIQSAIIPPSQDTVFVLLNCSIDSPVLNHY---KYLCFNFEGHTCDELYGGCNA-----FRVFHLLTNSSPP-CCFTSYNTVKFMSMNILDCTHYTSVFNSDKLRGVGPLDWVYGIKLSFSV--PDIGCESCKQSGGTCGFD-TDTQGL--LCLC 806
            C++ CG I ++YPF + +GCG P +R +  C    L F   SGSY+V  IDY  +++TL+DP MS C  +      + F   D ++    P+ D VF+L+ CS  SP+   +   K  C N  G +C+E Y  C A     +R   + + S PP CC   + +VK ++++ L+C  Y+S +N   L+  GP DW YGI++ + +   D  C +C  + GTCG++  D  GL  +C+C
Sbjct:   22 CRSYCGNITVDYPFGIRNGCGHPGYRDLLFCMNDVLMFHISSGSYRVLDIDYAYQSITLHDPHMSNCETIVLGGKGNGFEAEDWRTPYFNPTSDNVFMLIGCSPKSPIFQGFPEKKVPCRNISGMSCEE-YMSCPAWDMVGYRQPGIHSGSGPPMCCGVGFESVKAINLSKLECEGYSSAYNLAPLKLRGPSDWAYGIRVKYELQGSDAFCRACVATSGTCGYEPADGGGLRHVCMC 257          
BLAST of GT624380 vs. TAIR peptide
Match: AT1G10380.1 (| Symbols: | Putative membrane lipoprotein | chr1:3400706-3402110 FORWARD LENGTH=305)

HSP 1 Score: 129.798 bits (325), Expect = 1.753e-30
Identity = 80/238 (33.61%), Postives = 112/238 (47.06%), Query Frame = 3
Query:  147 CKTSCGTIPINYPFALEDGCGSPQFRQMFNCTTTD--LFFQTPSGSYKVQSIDYTKKTMTLYDPSMSTCSILQPHHDFIMTDIQSAIIPPSQDTVFVLLNCSID-SPVLNHYK------YLCFNFEGHTCDELYGGCNAFRVFHLLTNSSPPCCF---TSYNTVKFMSMNILDCTHYTSVFNSDKLRGVGPLDWVYGIKLSF------SVPDIGCESCKQSGGTCGFDTDTQGLLCLC 806
            C+ +CG IPI YP     GCG P+F +   C      L   T +GSY + S+DY K+ + + DPSMSTC+  +P H F +     A      DTVF LL+CS+D SPV            LC       C  LY  C A  + +L  ++   CC            M +N L C+ Y+  +N    +   P +W YGI L +        P + C SC++S G CGF+T +   +C C
Sbjct:   29 CQKTCGQIPIKYPLGTGSGCGDPRFTRYITCDPDQQTLTLTTHTGSYPITSVDYAKQEIYVTDPSMSTCACTRPSHGFGLD--WDAPFSFHDDTVFTLLDCSVDESPVFTPLSNGSGRVSLCDRQSSSICTFLYSNCRAISLINLQVST---CCVYVPLDLGPSFEMDLNKLKCSSYSGFYNLGPGQESHPENWNYGIALKYKFNVFDEYPGV-CGSCERSNGACGFNTQSSSFVCNC 260          
BLAST of GT624380 vs. TAIR peptide
Match: AT1G11915.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 261 Blast hits to 261 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:4021830-4023084 FORWARD LENGTH=329)

HSP 1 Score: 124.405 bits (311), Expect = 7.363e-29
Identity = 75/234 (32.05%), Postives = 108/234 (46.15%), Query Frame = 3
Query:  147 CKTSCGTIPINYPFALEDGCGSPQFRQMFNCTTTD--LFFQTPSGSYKVQSIDYTKKTMTLYDPSMSTC---SILQPHHDFIMTDIQSAIIPPSQDTVFVLLNCSIDSPVLNHYKYLCFNFEGH---TCDELYGGCNAFRVFHLLTNSSPPCCFTSYNTVKFMSMNILDCTHYTSVFNSDKLRGVGPLDWV--YGIKLSFSVP----DIGCESCKQSGGTCGFDTDTQGLLCLC 806
            C++SCG IPINYPF+++DGCGSP +R M  C+  D  L  +TPSG Y V+SI Y+   + + DP M  C      +P   F +       + P  D +F   NC+ D  ++      C  F      +CD     C           S   CC       + + + + DC  YTSV+         P D    YGI++ +  P     + C+   + GG CGF+T T+  LCLC
Sbjct:   31 CRSSCGNIPINYPFSIDDGCGSPYYRHMLICSDNDTKLELRTPSGKYPVKSISYSDPHLLVSDPFMWNCQDRDNFRPTRSFSIDSSTHFTVSPQNDYLF--FNCNTDKVIVEPKPLFCERFPDRCDSSCDSSSYLCRHLPECGSALGSRVSCCSYYPKATQSLRLMLQDCATYTSVYWRSTGVENAPYDQFPEYGIRVDYEFPVTMKCLLCQETTKGGGVCGFNTRTRDFLCLC 262          
The following BLAST results are available for this feature:
BLAST of GT624380 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A9PCR1_POPTR2.419e-10978.92Putative uncharacterized protein OS=Populus tricho... [more]
B9HII5_POPTR5.959e-10878.03Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RZX9_RICCO1.016e-10777.83Putative uncharacterized protein OS=Ricinus commun... [more]
D7T675_VITVI3.061e-10472.97Whole genome shotgun sequence of line PN40024, sca... [more]
C6TFA5_SOYBN1.469e-9479.90Putative uncharacterized protein OS=Glycine max PE... [more]
B9HX90_POPTR4.898e-9480.41Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9P8X3_POPTR1.206e-9279.38Putative uncharacterized protein OS=Populus tricho... [more]
D7L6R5_ARALY2.515e-9066.23Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9LUT6_ARATH1.803e-8864.19Gb|AAD32889.1 OS=Arabidopsis thaliana GN=At3g17350... [more]
B3VWZ0_POPTN1.137e-6685.71Expressed protein (Fragment) OS=Populus tremula PE... [more]
back to top
BLAST of GT624380 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT3G17350.11.154e-9064.19| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT5G50290.11.480e-3735.02| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT1G10380.11.753e-3033.61| Symbols: | Putative membrane lipoprotein | chr1... [more]
AT1G11915.17.363e-2932.05| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 27..51
score: NAcoord: 63..70
score
NoneNo IPR availableSEGsegsegcoord: 20..35
score
NoneNo IPR availableSEGsegsegcoord: 90..101
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT624380 ID=GT624380; Name=GT624380; organism=Lens culinaris; type=EST; length=810bp
GTCACTCACCTTTGTTTCTTTGTTTTCTCTGCTAAAAGTTCTTACTCGTG
ACCATGCATCTTCCACCACCATTCACCATCATCAAACTTGTTCTACTAAC
ACTCCAACTCCTACTACAACCCATTCCCATTCTCACTCTCTCTCCCTGCA
AAACCTCATGTGGCACCATTCCCATAAACTACCCATTCGCCTTAGAAGAC
GGTTGCGGCTCACCCCAGTTCCGACAAATGTTCAACTGCACAACCACTGA
CTTATTCTTCCAAACACCTTCCGGCTCATACAAAGTTCAATCCATAGACT
ACACCAAAAAAACAATGACACTCTACGACCCATCAATGTCAACCTGCTCC
ATTCTTCAACCACACCACGACTTCATCATGACAGATATTCAGTCTGCTAT
AATCCCTCCATCACAAGACACAGTTTTCGTTCTGCTAAACTGCTCTATAG
ACTCCCCTGTCCTCAACCATTACAAATATCTATGCTTCAACTTTGAAGGA
CACACTTGTGATGAGCTTTATGGTGGTTGTAATGCTTTTAGGGTGTTTCA
TTTGTTGACGAATAGTTCTCCACCTTGTTGTTTTACGAGCTATAATACTG
TGAAGTTTATGAGTATGAATATTTTGGATTGTACACATTATACTAGTGTG
TTTAATAGTGATAAATTGAGAGGTGTTGGTCCTTTGGATTGGGTTTATGG
GATTAAACTTTCTTTTAGTGTGCCCGATATTGGATGTGAAAGTTGTAAGC
AATCTGGGGGGACTTGTGGGTTTGATACTGATACTCAAGGTCTTCTTTGT
CTCTGCTCAA
back to top