GT624461

EST Overview


Name	GT624461
Unique Name	GT624461
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	771

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

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BLAST of GT624461 vs. TrEMBL
Match: B9MXU3_POPTR (GRAS family transcription factor OS=Populus trichocarpa GN=GRAS13 PE=4 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 9.446e-84
Identity = 158/212 (74.53%), Postives = 176/212 (83.02%), Query Frame = 1

Query:  142 MKAELKA--TSISFQNPSLFNTISSPPPLPQPEALKGCLGSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRITVPSFRPMVPPLVNISIHEVGQRL 771
            MK EL+   TSIS QNPSLFNT    P      ALKGCLGSLDGACIEKLLLHCASALE ND TL QQVMWVLNNVAS +GD NQRLTSWFLRAL+SRAS++CPT+M+F GS+ I+RR MSVTELA YVDLIPWHRFGFCASN+ IFKAI+G+ +VH+LDFS+T CMQWPT ID+LAK  EGPPSLRITVPS RP VPP +N+S  EVG RL
Sbjct:    1 MKTELRGNTTSISLQNPSLFNT----PQSSLSGALKGCLGSLDGACIEKLLLHCASALEHNDGTLVQQVMWVLNNVASLVGDPNQRLTSWFLRALVSRASKVCPTAMDFDGSSTIRRRQMSVTELAVYVDLIPWHRFGFCASNSAIFKAIEGYSKVHILDFSITHCMQWPTLIDALAKRPEGPPSLRITVPSCRPPVPPFLNVSCEEVGLRL 208

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BLAST of GT624461 vs. TrEMBL
Match: A5AKJ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041420 PE=4 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 1.364e-82
Identity = 159/213 (74.65%), Postives = 176/213 (82.63%), Query Frame = 1

Query:  142 MKAELKATS--ISFQNPSLFNTISSPPPLPQPEALKGCLGSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTS-MNFKGSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRITVPSFRPMVPPLVNISIHEVGQRL 771
            MKAEL+     IS Q  SLFNT    P      AL+GCLGSLDGACIEKLLLHCASALESND+TLAQQVMWVLNNVAS +GD NQRL SWFLRALISRASR+CPT+ MNF GS+ +QRRLM+VTELA YVDLIPWHRFGFCA+N+ IF AI+G  RVH+LDFS+T CMQWPT ID+LAK  EGPPSLRITVPSFRP VPPL+N+S  EVG RL
Sbjct:   24 MKAELRGNPPPISLQXXSLFNT----PQNSLSGALRGCLGSLDGACIEKLLLHCASALESNDVTLAQQVMWVLNNVASSMGDPNQRLASWFLRALISRASRVCPTTAMNFSGSSGLQRRLMTVTELAEYVDLIPWHRFGFCAANSTIFNAIQGCPRVHILDFSITHCMQWPTLIDALAKRPEGPPSLRITVPSFRPPVPPLLNVSSEEVGLRL 232

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BLAST of GT624461 vs. TrEMBL
Match: B9RPN0_RICCO (DELLA protein DWARF8, putative OS=Ricinus communis GN=RCOM_1546390 PE=4 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 5.183e-82
Identity = 157/213 (73.71%), Postives = 176/213 (82.63%), Query Frame = 1

Query:  142 MKAELK---ATSISFQNPSLFNTISSPPPLPQPEALKGCLGSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRITVPSFRPMVPPLVNISIHEVGQRL 771
            MK EL+   +T IS QN +LFN+  +   L    AL+GCLGSLDGACIEKLLLHCASALESND TLAQQVMWVLNNVAS +GD NQRLTSWFLRALISRAS++CPT+MNF GS+ IQRR MSVTELAGYVDLIPWHRFGFCASN+ IFKAI+   +VH+LDFS+T CMQWPT ID+LAK  EGPPSLRITVP  RP VPP +N+S  EVG RL
Sbjct:    1 MKTELRTNTSTPISLQNSTLFNSPQTQSSLSG--ALRGCLGSLDGACIEKLLLHCASALESNDGTLAQQVMWVLNNVASLVGDPNQRLTSWFLRALISRASKVCPTAMNFDGSSTIQRRQMSVTELAGYVDLIPWHRFGFCASNSAIFKAIEECPKVHILDFSITHCMQWPTLIDALAKRPEGPPSLRITVPFTRPQVPPWLNVSTEEVGLRL 211

[Close]

BLAST of GT624461 vs. TrEMBL
Match: B9HE60_POPTR (GRAS family transcription factor OS=Populus trichocarpa GN=GRAS11 PE=4 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 6.769e-82
Identity = 157/213 (73.71%), Postives = 173/213 (81.22%), Query Frame = 1

Query:  142 MKAELKA---TSISFQNPSLFNTISSPPPLPQPEALKGCLGSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRITVPSFRPMVPPLVNISIHEVGQRL 771
            MK EL+    TSIS QNPSLFN     P      AL GCLGSLDGACIEKLLLHCASALE ND TLAQQVMWVLNNVAS +GD NQRLTSWFLRALISRAS++CPT+MNF GS+ I+RR MSVTELA YVDLIPWHRFGFCASN+ I KAI+G+ +VH+LDFS+T CMQWPT ID+LA   EGPPSLRITVPS RP VPP +N+S  EVG RL
Sbjct:    1 MKTELRGNSNTSISLQNPSLFNN----PQSSLSGALNGCLGSLDGACIEKLLLHCASALEHNDGTLAQQVMWVLNNVASLVGDPNQRLTSWFLRALISRASKVCPTAMNFDGSSTIRRRNMSVTELAVYVDLIPWHRFGFCASNSAILKAIEGYSKVHILDFSITHCMQWPTLIDALAIRPEGPPSLRITVPSCRPPVPPFLNVSCEEVGLRL 209

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BLAST of GT624461 vs. TrEMBL
Match: C5Z0F5_SORBI (Putative uncharacterized protein Sb09g024690 OS=Sorghum bicolor GN=Sb09g024690 PE=4 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.737e-53
Identity = 105/176 (59.66%), Postives = 129/176 (73.30%), Query Frame = 1

Query:  259 LDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFK-----GSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRITVPSFRPMVPPLVNISIHEVGQRL 771
            +DG  I++LLLHCA+ALESND+TLAQQ MWVLNN+AS  GD +QRLTSW LRAL++RA R+C  +   +     G+   + R MSVTELA Y+DL PWHRFGF ASN  I +A+ G   VHV+D S+T CMQWPT ID L+K   GPP+LRITVPS RP VPP + +S  E+G RL
Sbjct:   27 IDGPRIQQLLLHCAAALESNDVTLAQQAMWVLNNIASSQGDPSQRLTSWLLRALVARACRLCGPAGTIQAAAAAGAPAPRERAMSVTELAEYIDLTPWHRFGFTASNGTILRAVAGSAAVHVVDLSVTRCMQWPTLIDMLSKRPGGPPALRITVPSARPAVPPQLGVSDEEIGLRL 202

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BLAST of GT624461 vs. TrEMBL
Match: A2Y676_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20499 PE=4 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.126e-52
Identity = 105/178 (58.99%), Postives = 129/178 (72.47%), Query Frame = 1

Query:  259 LDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQR-------RLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRITVPSFRPMVPPLVNISIHEVGQRL 771
            +DG  I++LLLHCA+ALESND+TLAQQ MWVLNN+AS  GD +QRLTSW LRAL++RA R+C  +      + ++R       R MSVTELA YVDL PWHRFGF ASN  I +A+ G   VHV+D S+T CMQWPT ID L+K   G P++RITVPS RP VPPL+ +S  E+G RL
Sbjct:   31 VDGRRIQQLLLHCAAALESNDVTLAQQAMWVLNNIASSQGDPSQRLTSWLLRALVARACRLCAAAPAGAAVDFLERGRAPPWGRAMSVTELADYVDLTPWHRFGFTASNAAILRAVAGASAVHVVDLSVTHCMQWPTLIDVLSKRPGGAPAIRITVPSVRPAVPPLLAVSSSELGARL 208

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BLAST of GT624461 vs. TrEMBL
Match: Q6AUW2_ORYSJ (Os05g0500600 protein OS=Oryza sativa subsp. japonica GN=OJ1057_B02.15 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.471e-52
Identity = 105/178 (58.99%), Postives = 128/178 (71.91%), Query Frame = 1

Query:  259 LDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQR-------RLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRITVPSFRPMVPPLVNISIHEVGQRL 771
            +DG  I++LLLHCA+ALESND+TLAQQ MWVLNN+AS  GD +QRLTSW LRAL++RA R+C  +        ++R       R MSVTELA YVDL PWHRFGF ASN  I +A+ G   VHV+D S+T CMQWPT ID L+K   G P++RITVPS RP VPPL+ +S  E+G RL
Sbjct:   31 VDGRRIQQLLLHCAAALESNDVTLAQQAMWVLNNIASSQGDPSQRLTSWLLRALVARACRLCAAAPAGAAVEFLERGRAPPWGRAMSVTELADYVDLTPWHRFGFTASNAAILRAVAGASAVHVVDLSVTHCMQWPTLIDVLSKRPGGAPAIRITVPSVRPAVPPLLAVSSSELGARL 208

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BLAST of GT624461 vs. TrEMBL
Match: B9FK99_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_19092 PE=4 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.921e-52
Identity = 105/178 (58.99%), Postives = 129/178 (72.47%), Query Frame = 1

Query:  259 LDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQR-------RLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRITVPSFRPMVPPLVNISIHEVGQRL 771
            +DG  I++LLLHCA+ALESND+TLAQQ MWVLNN+AS  GD +QRLTSW LRAL++RA R+C ++        ++R       R MSVTELA YVDL PWHRFGF ASN  I +A+ G   VHV+D S+T CMQWPT ID L+K   G P++RITVPS RP VPPL+ +S  E+G RL
Sbjct:   31 VDGRRIQQLLLHCAAALESNDVTLAQQAMWVLNNIASSQGDPSQRLTSWLLRALVARACRLCASAPAGAPVEFLERGRAPPWGRAMSVTELADYVDLTPWHRFGFTASNAAILRAVAGASAVHVVDLSVTHCMQWPTLIDVLSKRPGGAPAIRITVPSVRPAVPPLLAVSSSELGARL 208

[Close]

BLAST of GT624461 vs. TrEMBL
Match: A5ANJ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023403 PE=4 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.474e-44
Identity = 101/207 (48.79%), Postives = 132/207 (63.77%), Query Frame = 1

Query:  172 SFQN-PSLFNTISSPPPLPQPEALKGCLGSL-DGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSM-----NFKGSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRITVPSFRPMVPPLVNISIHEVGQRL 771
            SF N P   N I    P P     K  LGS  D  C+E+LL+HCA+A+ESND TLAQQ++WVLNN+A P GD+NQRLT  FLRALI+RA+      M     N   +  I     SV ELA +VDL PWHRFGF A+N  I + ++G+  +H++D SLT CMQ PT ID+LA   EGPP +++TV      VPP++++S  E+G +L
Sbjct:   17 SFSNLPMNNNQIHRTRPWPGFPTSKA-LGSFGDANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCGFLRALIARAANSGTCKMFTAMANAHANLAINTHKFSVIELASFVDLTPWHRFGFAAANAAILEVVEGYSVIHIVDLSLTHCMQIPTLIDALANRPEGPPLVKLTVAGATEDVPPMLDLSYEELGSKL 222

[Close]

BLAST of GT624461 vs. TrEMBL
Match: B9SGY5_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0578410 PE=4 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 8.090e-43
Identity = 93/191 (48.69%), Postives = 126/191 (65.97%), Query Frame = 1

Query:  214 PPLPQPEALKGCLGSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASR-----ICPTSMNFKGSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRITVPSFRPMVPPLVNISIHEVGQRL 771
            P  P  +AL    G  D  C+E+LL+HCA+A+ESND TLAQQ++WVLNN+A P GD+NQRLT  FLRALI+RA++     +     N   +  I     SV ELA +VDL PWHRFGF A+N  I +AI+GF  VH++D SLT CMQ PT ID++A   E  P +++TV      +PP++++S  E+G +L
Sbjct:   14 PGFPTSKALGNNFG--DANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCAFLRALIARAAKSGTCKLLAAMANAHCTLAIDAHKFSVIELASFVDLTPWHRFGFTAANASILEAIEGFSVVHIVDLSLTHCMQIPTLIDAIANRFEVTPMIKLTVAGCTEDIPPMLDLSYEELGCKL 202

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BLAST of GT624461 vs. SwissProt
Match: SCL32_ARATH (Scarecrow-like protein 32 OS=Arabidopsis thaliana GN=SCL32 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.889e-44
Identity = 96/194 (49.48%), Postives = 128/194 (65.98%), Query Frame = 1

Query:  202 ISSPPPLPQPEALKGCLGSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPT---SMNFKGSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLA-KLQEGPPSLRITVPSFRPMVPPLVNISIHEVGQRL 771
            I +P   P P+ L+GC    D   +E+LLLHCA+A++SND  L  Q++WVLNN+A P GD+ QRLTS FLRAL+SRA    PT   +++F        R  SV ELA +VDL PWHRFGF A+N  I  A++G+  VH++D SLT CMQ PT ID++A +L + PP L++TV S     PP +NIS  E+G +L
Sbjct:    6 ILNPTRFPSPKPLRGCG---DANFMEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSSTISFLPQADELHRF-SVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKL 195

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BLAST of GT624461 vs. SwissProt
Match: SHR_ARATH (Protein SHORT-ROOT OS=Arabidopsis thaliana GN=SHR PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.825e-20
Identity = 57/181 (31.49%), Postives = 93/181 (51.38%), Query Frame = 1

Query:  181 NPSLFNTISSPPPLPQPEALKGCLGSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRAS-------RICPTSMNFKGSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRIT 702
            +PS F+   +PP             S +    + +LL  A A    D   AQQ++W LN ++SP GDT Q+L S+FL+AL +R +       R   T+   + +   +    +V +   + ++ PW  FG  A+N  I +A+ G  ++H++D S T C QWPT +++LA   +  P LR+T
Sbjct:  121 DPSAFSIPQTPPSFDF---------SANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLK---FQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLT 289

[Close]

BLAST of GT624461 vs. SwissProt
Match: SHR1_ORYSJ (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica GN=SHR1 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 4.496e-19
Identity = 63/186 (33.87%), Postives = 93/186 (50.00%), Query Frame = 1

Query:  253 GSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRLMSVTELAG--YVDLIPWHRFGFCASNNEIFK--------AIKGFKRVHVLDFSLTPCMQWPTFIDSLA-KLQEGPPSLRI-TVPSFRPMVP-PLVNISIHEVGQRL 771
            G   G    +LLL CA ++ + D    QQ+MW+LN +ASP GD  Q+L S+FL+ L +R +   P ++    +   +      T      + +L PW  FG  A+N  I +        A    +R H+LD S T C QWPT +++LA +  +  P L I TV S  P  P   V   + E+GQR+
Sbjct:  185 GGGGGRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQRVMREIGQRM 370

[Close]

BLAST of GT624461 vs. SwissProt
Match: SHR1_ORYSI (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica GN=SHR1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.806e-18
Identity = 62/186 (33.33%), Postives = 92/186 (49.46%), Query Frame = 1

Query:  253 GSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRLMSVTELAG--YVDLIPWHRFGFCASNNEIFK--------AIKGFKRVHVLDFSLTPCMQWPTFIDSLA-KLQEGPPSLRI-TVPSFRPMVP-PLVNISIHEVGQRL 771
            G   G    +LLL CA ++ + D    QQ+MW+LN +ASP GD  Q+L S+FL+ L +R +     ++    +   +      T      + +L PW  FG  A+N  I +        A    +R H+LD S T C QWPT +++LA +  +  P L I TV S  P  P   V   + E+GQR+
Sbjct:  185 GGGGGRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASGQRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQRVMREIGQRM 370

[Close]

BLAST of GT624461 vs. SwissProt
Match: SHR2_ORYSJ (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica GN=SHR2 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.971e-18
Identity = 68/232 (29.31%), Postives = 102/232 (43.97%), Query Frame = 1

Query:  157 KATSISFQNPSLFNTISSPPPLPQPE---ALKGCLGSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRLMSVTELAG--YVDLIPWHRFGFCASNNEIFKAIKGF-------------------KRVHVLDFSLTPCMQWPTFIDSLA-KLQEGPPSLRIT--VPSFRPMVPPLVNISIHEVGQRL 771
            +A   SF    +       P +P      A  G   S  G    +LL+ CA A+   D    QQ+MW+LN +ASP GD +Q+L S+FL+ L +R +   P ++    +   +      T      + +L PW  FG  A+N  I ++                        R+H+LD S T C QWPT +++LA +  +  P L IT  VP+  P         + E+GQRL
Sbjct:  146 EAADFSFPQVDISLDFGGSPAVPSSSGAGAGAGAAPSSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEAAAAGAAASSSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTAAPSA--AAQRVMREIGQRL 375

[Close]

BLAST of GT624461 vs. SwissProt
Match: SHR2_ORYSI (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica GN=SHR2 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.971e-18
Identity = 68/232 (29.31%), Postives = 102/232 (43.97%), Query Frame = 1

Query:  157 KATSISFQNPSLFNTISSPPPLPQPE---ALKGCLGSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRLMSVTELAG--YVDLIPWHRFGFCASNNEIFKAIKGF-------------------KRVHVLDFSLTPCMQWPTFIDSLA-KLQEGPPSLRIT--VPSFRPMVPPLVNISIHEVGQRL 771
            +A   SF    +       P +P      A  G   S  G    +LL+ CA A+   D    QQ+MW+LN +ASP GD +Q+L S+FL+ L +R +   P ++    +   +      T      + +L PW  FG  A+N  I ++                        R+H+LD S T C QWPT +++LA +  +  P L IT  VP+  P         + E+GQRL
Sbjct:  146 EAADFSFPQVDISLDFGGSPAVPSSSGAGAGAGAAPSSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEAAAAGAAAASSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTAAPSA--AAQRVMREIGQRL 375

[Close]

BLAST of GT624461 vs. SwissProt
Match: RGA1_BRACM (DELLA protein RGA1 OS=Brassica campestris GN=RGA1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.037e-15
Identity = 52/172 (30.23%), Postives = 90/172 (52.33%), Query Frame = 1

Query:  262 DGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRITVPSFRPMVPPLVNIS--IHEVGQRL 771
            +G  +   L+ CA A++S+++TLA+ ++  +  +A       +++ ++F  AL  R  R+ P       S       +S T    + +  P+ +F    +N  I +A +G KRVHV+DFS+   +QWP  + +LA  + GPPS R+T      + PP  + S  +HEVG +L
Sbjct:  204 NGVRLVHALMACAEAVQSSNLTLAEALVKQIGFLAVSQAGAMRKVATYFAEALARRIYRLSPPQTQIDHS-------LSDTLQMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPSFRLT-----GIGPPAADNSDHLHEVGCKL 363

[Close]

BLAST of GT624461 vs. SwissProt
Match: RGA_ARATH (DELLA protein RGA OS=Arabidopsis thaliana GN=RGA PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.016e-15
Identity = 52/172 (30.23%), Postives = 90/172 (52.33%), Query Frame = 1

Query:  262 DGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRITVPSFRPMVPPLVNIS--IHEVGQRL 771
            +G  +   L+ CA A++ N++TLA+ ++  +  +A       +++ ++F  AL  R  R+ P        N I   L    ++  Y +  P+ +F    +N  I +A +G KRVHV+DFS+   +QWP  + +LA  + GPP+ R+T      + PP  + S  +HEVG +L
Sbjct:  217 NGVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARRIYRLSPPQ------NQIDHCLSDTLQMHFY-ETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLT-----GIGPPAPDNSDHLHEVGCKL 376

[Close]

BLAST of GT624461 vs. SwissProt
Match: RGA2_BRACM (DELLA protein RGA2 OS=Brassica campestris GN=RGA2 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.016e-15
Identity = 50/172 (29.07%), Postives = 89/172 (51.74%), Query Frame = 1

Query:  262 DGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRITVPSFRPMVPPLVNIS--IHEVGQRL 771
            +G  +   L+ CA A+++ND+++A+ ++  +  +A       +++ ++F  AL  R  R+ P       S       +S T    + +  P+ +F    +N  I +A +G KRVHV+DFS+   +QWP  + +LA  + GPP  R+T      + PP  + S  +HEVG +L
Sbjct:  210 NGVRLVHALMACAEAIQNNDLSIAEALVKQIGFLAVSQAGAMRKVATYFAEALARRIYRLSPPQTQIDHS-------LSDTLQMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPVFRLT-----GIGPPAADNSDHLHEVGCKL 369

[Close]

BLAST of GT624461 vs. SwissProt
Match: GAIP_CUCMA (DELLA protein GAIP OS=Cucurbita maxima GN=GAIP PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.016e-15
Identity = 44/147 (29.93%), Postives = 81/147 (55.10%), Query Frame = 1

Query:  262 DGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRIT 702
            +G  +   L+ CA A++ N++ LA+ ++  ++ +A       +++ ++F  AL  R  R+CP        N + R ++ + ++  Y +  P+ +F    +N  I +A +G KRVHV+DFS+   +QWP  I +LA    GPP+ R+T
Sbjct:  207 NGIQLVHALMVCAEAVQQNNLNLAEALVKRIDYLAVSQAGAMRKVATFFAEALARRIYRLCP-------ENPLDRSVLDMLQMHFY-ESCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGIQWPALIQALALRPSGPPTFRLT 345

[Close]

BLAST of GT624461 vs. TAIR peptide
Match: AT3G49950.1 (| Symbols: | GRAS family transcription factor | chr3:18522570-18523802 FORWARD LENGTH=410)

HSP 1 Score: 177.563 bits (449), Expect = 6.877e-45
Identity = 96/194 (49.48%), Postives = 128/194 (65.98%), Query Frame = 1

Query:  202 ISSPPPLPQPEALKGCLGSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPT---SMNFKGSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLA-KLQEGPPSLRITVPSFRPMVPPLVNISIHEVGQRL 771
            I +P   P P+ L+GC    D   +E+LLLHCA+A++SND  L  Q++WVLNN+A P GD+ QRLTS FLRAL+SRA    PT   +++F        R  SV ELA +VDL PWHRFGF A+N  I  A++G+  VH++D SLT CMQ PT ID++A +L + PP L++TV S     PP +NIS  E+G +L
Sbjct:    6 ILNPTRFPSPKPLRGCG---DANFMEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSSTISFLPQADELHRF-SVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKL 195

[Close]

BLAST of GT624461 vs. TAIR peptide
Match: AT4G37650.1 (| Symbols: SHR, SGR7 | GRAS family transcription factor | chr4:17691871-17693466 FORWARD LENGTH=531)

HSP 1 Score: 99.7525 bits (247), Expect = 1.822e-21
Identity = 57/181 (31.49%), Postives = 93/181 (51.38%), Query Frame = 1

Query:  181 NPSLFNTISSPPPLPQPEALKGCLGSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRAS-------RICPTSMNFKGSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRIT 702
            +PS F+   +PP             S +    + +LL  A A    D   AQQ++W LN ++SP GDT Q+L S+FL+AL +R +       R   T+   + +   +    +V +   + ++ PW  FG  A+N  I +A+ G  ++H++D S T C QWPT +++LA   +  P LR+T
Sbjct:  121 DPSAFSIPQTPPSFDF---------SANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLK---FQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLT 289

[Close]

BLAST of GT624461 vs. TAIR peptide
Match: AT2G01570.1 (| Symbols: RGA1, RGA | GRAS family transcription factor family protein | chr2:255581-257344 REVERSE LENGTH=587)

HSP 1 Score: 82.4185 bits (202), Expect = 3.011e-16
Identity = 52/172 (30.23%), Postives = 90/172 (52.33%), Query Frame = 1

Query:  262 DGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRITVPSFRPMVPPLVNIS--IHEVGQRL 771
            +G  +   L+ CA A++ N++TLA+ ++  +  +A       +++ ++F  AL  R  R+ P        N I   L    ++  Y +  P+ +F    +N  I +A +G KRVHV+DFS+   +QWP  + +LA  + GPP+ R+T      + PP  + S  +HEVG +L
Sbjct:  217 NGVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARRIYRLSPPQ------NQIDHCLSDTLQMHFY-ETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLT-----GIGPPAPDNSDHLHEVGCKL 376

[Close]

BLAST of GT624461 vs. TAIR peptide
Match: AT1G50420.1 (| Symbols: SCL3, SCL-3 | scarecrow-like 3 | chr1:18678177-18679625 REVERSE LENGTH=482)

HSP 1 Score: 78.5666 bits (192), Expect = 4.348e-15
Identity = 62/199 (31.16%), Postives = 97/199 (48.74%), Query Frame = 1

Query:  136 VHMKAELKATSISFQNP-SLFNTIS-SPPPLPQPEALKGCLGSLD----GACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRLMSVTELAG----YVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRIT 702
            V M  E   TS    +P  +F+T+S + P L    +   CL  L     G  +  LLL CA+ + S  +  A   +  L+++ASP GDT QR+ ++F  AL +R  +  P    +K  N  Q R  +V+E       + ++ P  +  +  +N  I +A++G K VHV+D   +   QW   + +     EGPP LRIT
Sbjct:    2 VAMFQEDNGTSSVASSPLQVFSTMSLNRPTLLASSSPFHCLKDLKPEERGLYLIHLLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGL--YKALNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPAQWLALLQAFNSRPEGPPHLRIT 198

[Close]

BLAST of GT624461 vs. TAIR peptide
Match: AT5G48150.2 (| Symbols: PAT1 | GRAS family transcription factor | chr5:19522497-19524053 REVERSE LENGTH=490)

HSP 1 Score: 77.0258 bits (188), Expect = 1.265e-14
Identity = 46/143 (32.17%), Postives = 76/143 (53.15%), Query Frame = 1

Query:  286 LLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRLMSVTELAGYVDLI----PWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRIT 702
            L+ CA A+  ND+ +A  +M  L  + S  G+  QRL ++ L  L+++ +     S  +K  N       + TEL  Y+ ++    P+ +FG+ ++N  I +A+K   RVH++DF +    QW T I + A    GPP +RIT
Sbjct:  123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLAS--SGSSIYKALNRCPEP--ASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRIT 261

[Close]

BLAST of GT624461 vs. TAIR peptide
Match: AT5G48150.1 (| Symbols: PAT1 | GRAS family transcription factor | chr5:19522497-19524053 REVERSE LENGTH=490)

HSP 1 Score: 77.0258 bits (188), Expect = 1.265e-14
Identity = 46/143 (32.17%), Postives = 76/143 (53.15%), Query Frame = 1

Query:  286 LLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRLMSVTELAGYVDLI----PWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRIT 702
            L+ CA A+  ND+ +A  +M  L  + S  G+  QRL ++ L  L+++ +     S  +K  N       + TEL  Y+ ++    P+ +FG+ ++N  I +A+K   RVH++DF +    QW T I + A    GPP +RIT
Sbjct:  123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLAS--SGSSIYKALNRCPEP--ASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRIT 261

[Close]

BLAST of GT624461 vs. TAIR peptide
Match: AT1G14920.1 (| Symbols: GAI, RGA2 | GRAS family transcription factor family protein | chr1:5149414-5151015 FORWARD LENGTH=533)

HSP 1 Score: 76.2554 bits (186), Expect = 2.158e-14
Identity = 49/170 (28.82%), Postives = 86/170 (50.59%), Query Frame = 1

Query:  262 DGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRITVPSFRPMVPPLVNISIHEVGQRL 771
            +G  +   LL CA A++  ++T+A+ ++  +  +A       +++ ++F  AL  R  R+ P+      S       +S T    + +  P+ +F    +N  I +A +G KRVHV+DFS++  +QWP  + +LA    GPP  R+T     P  P   +  +HEVG +L
Sbjct:  165 NGVRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEALARRIYRLSPSQSPIDHS-------LSDTLQMHFYETCPYLKFAHFTANQAILEAFQGKKRVHVIDFSMSQGLQWPALMQALALRPGGPPVFRLT--GIGPPAPDNFDY-LHEVGCKL 324

[Close]

BLAST of GT624461 vs. TAIR peptide
Match: AT2G04890.1 (| Symbols: SCL21 | SCARECROW-like 21 | chr2:1720575-1721816 REVERSE LENGTH=413)

HSP 1 Score: 72.0182 bits (175), Expect = 4.069e-13
Identity = 44/150 (29.33%), Postives = 79/150 (52.67%), Query Frame = 1

Query:  274 IEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNI---IQRRLMSVTELAGYV----DLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRIT 702
            ++ +L+ CA A+  N++ +A+  M  L  + S  G+  QRL ++ L  L++R +          GS+I   +Q R     E   YV    ++ P+ +FG+ ++N  I +A+K  +R+H++DF +    QW   I + A    G P++RIT
Sbjct:   50 LKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAA--------SGSSIYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAARPGGAPNIRIT 191

[Close]

BLAST of GT624461 vs. TAIR peptide
Match: AT3G13840.1 (| Symbols: | GRAS family transcription factor | chr3:4555305-4556837 REVERSE LENGTH=510)

HSP 1 Score: 71.633 bits (174), Expect = 5.315e-13
Identity = 49/159 (30.82%), Postives = 84/159 (52.83%), Query Frame = 1

Query:  253 GSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRL-MSVTELAGYVDLIPWHRFGFCASNNEIFKAI----KGFKRVHVLDFSLTPCMQWPTFIDSLA-KLQEGPPSLRITVPS 711
            G+ +G   EKLL  CA A+ +++ +  Q  + VL+ +AS  GD N+RL ++ LRAL    S    +S  +         + M    L  + ++ PW       +N+ I + +    K  K +H++D  ++  MQWPT +++L+ +L+  PP +RITV S
Sbjct:  138 GNKEGRWAEKLLNPCALAITASNSSRVQHYLCVLSELASSSGDANRRLAAFGLRALQHHLSSSSVSSSFWPVFTFASAEVKMFQKTLLKFYEVSPWFALPNNMANSAILQILAQDPKDKKDLHIIDIGVSHGMQWPTLLEALSCRLEGPPPRVRITVIS 296

[Close]

BLAST of GT624461 vs. TAIR peptide
Match: AT2G37650.1 (| Symbols: | GRAS family transcription factor | chr2:15792623-15794779 FORWARD LENGTH=718)

HSP 1 Score: 68.9366 bits (167), Expect = 3.445e-12
Identity = 52/174 (29.89%), Postives = 81/174 (46.55%), Query Frame = 1

Query:  274 IEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRLMSVTELAG---YVDLIPWHRFGFCASNNEIFKAIKGFKRVHVLDFSLTPCMQWPTFIDSLAKLQEGPPSLRIT-----VPSFRPMVPPLVNISIHEVGQRL 771
            +  LL+HCA A+ ++D   A Q++  +   ++P GD NQRL   F   L +R +     S  +KG  I+ +   +   L     ++   P+ +  +  +N  I   +   +RVHV+DF +    QWPT I   +    G P +RIT      P FRP         + E GQRL
Sbjct:  344 LRSLLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEARLAG--TGSQIYKG--IVSKPRSAAAVLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGFQWPTLIHRFS--MYGSPKVRITGIEFPQPGFRPAQ------RVEETGQRL 505

The following BLAST results are available for this feature:

BLAST of GT624461 vs. TrEMBL
BLAST of GT624461 vs. SwissProt
BLAST of GT624461 vs. TAIR peptide

BLAST of GT624461 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9MXU3_POPTR	9.446e-84	74.53	GRAS family transcription factor OS=Populus tricho...	[more]
A5AKJ1_VITVI	1.364e-82	74.65	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9RPN0_RICCO	5.183e-82	73.71	DELLA protein DWARF8, putative OS=Ricinus communis...	[more]
B9HE60_POPTR	6.769e-82	73.71	GRAS family transcription factor OS=Populus tricho...	[more]
C5Z0F5_SORBI	1.737e-53	59.66	Putative uncharacterized protein Sb09g024690 OS=So...	[more]
A2Y676_ORYSI	1.126e-52	58.99	Putative uncharacterized protein OS=Oryza sativa s...	[more]
Q6AUW2_ORYSJ	1.471e-52	58.99	Os05g0500600 protein OS=Oryza sativa subsp. japoni...	[more]
B9FK99_ORYSJ	1.921e-52	58.99	Putative uncharacterized protein OS=Oryza sativa s...	[more]
A5ANJ0_VITVI	1.474e-44	48.79	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9SGY5_RICCO	8.090e-43	48.69	Transcription factor, putative OS=Ricinus communis...	[more]

BLAST of GT624461 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
SCL32_ARATH	6.889e-44	49.48	Scarecrow-like protein 32 OS=Arabidopsis thaliana ...	[more]
SHR_ARATH	1.825e-20	31.49	Protein SHORT-ROOT OS=Arabidopsis thaliana GN=SHR ...	[more]
SHR1_ORYSJ	4.496e-19	33.87	Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japoni...	[more]
SHR1_ORYSI	3.806e-18	33.33	Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica...	[more]
SHR2_ORYSJ	4.971e-18	29.31	Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japoni...	[more]
SHR2_ORYSI	4.971e-18	29.31	Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica...	[more]
RGA1_BRACM	1.037e-15	30.23	DELLA protein RGA1 OS=Brassica campestris GN=RGA1 ...	[more]
RGA_ARATH	3.016e-15	30.23	DELLA protein RGA OS=Arabidopsis thaliana GN=RGA P...	[more]
RGA2_BRACM	3.016e-15	29.07	DELLA protein RGA2 OS=Brassica campestris GN=RGA2 ...	[more]
GAIP_CUCMA	3.016e-15	29.93	DELLA protein GAIP OS=Cucurbita maxima GN=GAIP PE=...	[more]

BLAST of GT624461 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT3G49950.1	6.877e-45	49.48	\| Symbols: \| GRAS family transcription factor \| c...	[more]
AT4G37650.1	1.822e-21	31.49	\| Symbols: SHR, SGR7 \| GRAS family transcription f...	[more]
AT2G01570.1	3.011e-16	30.23	\| Symbols: RGA1, RGA \| GRAS family transcription f...	[more]
AT1G50420.1	4.348e-15	31.16	\| Symbols: SCL3, SCL-3 \| scarecrow-like 3 \| chr1:1...	[more]
AT5G48150.2	1.265e-14	32.17	\| Symbols: PAT1 \| GRAS family transcription factor...	[more]
AT5G48150.1	1.265e-14	32.17	\| Symbols: PAT1 \| GRAS family transcription factor...	[more]
AT1G14920.1	2.158e-14	28.82	\| Symbols: GAI, RGA2 \| GRAS family transcription f...	[more]
AT2G04890.1	4.069e-13	29.33	\| Symbols: SCL21 \| SCARECROW-like 21 \| chr2:172057...	[more]
AT3G13840.1	5.315e-13	30.82	\| Symbols: \| GRAS family transcription factor \| c...	[more]
AT2G37650.1	3.445e-12	29.89	\| Symbols: \| GRAS family transcription factor \| c...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 93..257 score: 8
IPR005202	Transcription factor GRAS	PROFILE	PS50985	GRAS	coord: 66..257 score: 25

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT624461 ID=GT624461; Name=GT624461; organism=Lens culinaris; type=EST; length=771bp
GCTTTCTACCCTATATATCATGTCTCAAAATACATAATAGCTTTTCTTAC
AAAACTCACCACAGAACAAAACCTAGTTATATCTTTCATTTCTCATTTCA
CTCAAAAACTTCAAGAAACACACAAACACATGCACGTCCACATGAAAGCT
GAGTTAAAAGCAACATCCATTTCCTTTCAAAACCCTTCACTTTTCAACAC
AATCAGTTCCCCTCCACCACTTCCTCAACCAGAAGCACTTAAAGGCTGTC
TTGGAAGCCTAGATGGAGCATGTATCGAAAAACTCTTGCTCCATTGTGCA
AGTGCTTTGGAAAGCAACGACATAACCCTAGCTCAACAAGTTATGTGGGT
CCTAAACAACGTTGCTTCACCATTAGGTGACACTAACCAAAGACTCACCT
CATGGTTTCTAAGAGCATTAATCTCTAGAGCTTCAAGAATTTGTCCTACT
TCAATGAATTTCAAAGGAAGTAACATTATTCAAAGAAGGTTGATGTCGGT
TACCGAACTCGCCGGGTATGTTGATCTTATTCCTTGGCATAGGTTTGGAT
TTTGTGCTTCAAACAATGAAATTTTCAAAGCAATTAAGGGATTCAAAAGG
GTGCATGTTTTAGATTTTAGCTTAACACCTTGTATGCAATGGCCTACTTT
TATAGATTCTTTGGCTAAATTACAAGAAGGTCCTCCTTCACTTAGAATCA
CGGTTCCATCTTTTAGGCCAATGGTTCCTCCTTTGGTTAATATATCAATA
CATGAAGTTGGTCAACGTTTA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR005202	TF_GRAS

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