GT624524

EST Overview
NameGT624524
Unique NameGT624524
TypeEST
OrganismLens culinaris (lentil)
Sequence length755
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology
BLAST of GT624524 vs. TrEMBL
Match: C6TDV1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.645e-43
Identity = 94/150 (62.67%), Postives = 110/150 (73.33%), Query Frame = 1
Query:  301 VCDDLGSNEGLKEIPLEVKSPNKNVGGDPGKINDELRGFDQGTSYNSSDLVNGEALETRVVIDSSAQDESVHGENRKLEAKTNESRLDKLSIKVPKGVSETDKNSCVIDVNCGSCKDFSENLDGETICRICHLASGQPLVETAVGTPNSA 750
            +C+DL  N  LKE   EV   N    GDP +IND L G DQGTSY+S +LV+ E  ET VV+D S Q E V+G+NRKLEAK NES L+K+S+KV  GVSETDKNSCVID+NC SC  FSENL+GE ICR+CHLASGQPL    VGT +SA
Sbjct:    1 MCNDLRLNRELKEGSQEVNDQNM---GDPQEINDTLHGVDQGTSYSSRNLVSWEVPETCVVVDPSTQIECVNGDNRKLEAKPNESGLNKVSMKVTNGVSETDKNSCVIDINCHSCDGFSENLEGEMICRVCHLASGQPLEAADVGTASSA 147          
BLAST of GT624524 vs. TrEMBL
Match: B9I1J0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_568688 PE=4 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.725e-13
Identity = 73/211 (34.60%), Postives = 103/211 (48.82%), Query Frame = 1
Query:  121 DSNIPRFSLFSKVVHFQEASKGSSEMLDHVDKGVNENSSRLVEGVATDAGAGHSLGGRVSVCDDLGSNEGLKEIPLEVKSPNKNVGGDPGKINDELRGF----------DQGTSYNSSDLVNGEALETRVVIDSSAQDESVHGENRKLEAKTNESRLDKLSIKVPKG-VSETDKNSCVIDVNCGSCKD-----FSENLDGETICRICHLAS 705
            +SNI    L  +VV+ Q AS G   + + +D+G + NSS  V     +     + G   SV    G N+ L        S N+ +G   G IN E+R             QG+S +SS  V+   LET +VIDS  ++  + G N++LEAK NE R  K ++   +  V    K+S VID+ CG         F +N DGE +CRICHL S
Sbjct:   64 NSNIEGLGLIERVVN-QGASDGK-RIGESLDEGTSSNSSNRVNETVLETVNVMNSGVTSSVN---GENKDLG-------SQNEELGLRGGVINQEIRHVLRDGEVLNLVGQGSSRHSSISVSEVLLETVIVIDSE-ENVGISGGNQRLEAKENELRSTKETVDESEAEVHLGGKSSRVIDMKCGDGDGTGGGGFKDNCDGEKVCRICHLTS 261          
BLAST of GT624524 vs. TrEMBL
Match: B9S8B4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1250150 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.947e-11
Identity = 64/210 (30.48%), Postives = 99/210 (47.14%), Query Frame = 1
Query:  121 DSNIPRFSLFSKVVHFQEASKGSSEMLDHVDKGVNENSSRLVEGVATDAGAGHSLGGRVSVC----------DDLGSNEGLKEIPLEVKSPNKNVGGDPGKINDELRGFDQGTSYNSSDLVNGEALETRVVIDSSAQDESVHGENRKLEAKTNES-----RLDKLSIKVPKGVSETDKNSCVIDVNCGSCKDFSENLDGETICRICHLAS 705
            D+N+    L S +      + G   + + +D+G + NSS LV  V  +     + G  VS+           DDLG    + +    V   N       G+++       Q  S +S+D+V    +ET V++ +S ++ S+ G N  LE K  E       +DK   KVP+G    +K SCVIDV CG      ++ DGE++CRICHL+S
Sbjct:   61 DANVN--GLGSTMTAVDHEASGGMGIREPLDQGTSGNSSYLVNEVVLERMIVINSGEIVSISGEHKHIGINIDDLGLTGIVSDQKTWVTRGNAETVDKVGQVSH------QDPSISSNDVV----VET-VILVNSEENPSISGGNDHLEIKGRELGPGKVMVDKSKKKVPRG----EKQSCVIDVKCGEVGSGFKDCDGESVCRICHLSS 253          
BLAST of GT624524 vs. TrEMBL
Match: B9H2G3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_758759 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 4.262e-9
Identity = 65/219 (29.68%), Postives = 101/219 (46.12%), Query Frame = 1
Query:  175 ASKGSSEMLDHVDKGVNE---------NSSRLVEGVATDAGAGHSLGGRVSVCDDLGSNEGLKEIPLEVKSPNKNVGGDPGKINDELR-GFDQGTSYNSSDLVNG-------EALETRVVIDSSAQDESVHGENRKLEAKTNESRLDKLSI-KVPKGVSETDKNSCVIDVNCGSCKD-----FSENLDGETICRICHLASGQPLVET---AVGTPNSAD 753
            AS+G+S+    +++ +NE         N + L   +  ++GA  S+ G      DLG+              N+ +G   G I++E R G   G   N  +   G         LET + I    ++  ++G N++LE + NE RL K ++ +  K V +  K+SCV+D+  G         F +N DGE +CRICHL+S   L  T   A  T NS D
Sbjct:   77 ASQGTSDR-KRIEESMNEGTVANTIMVNGAVLETVIVMNSGATSSVDGENK---DLGAK-------------NEELGLRCGMIDEETRHGLGDGEVLNQVERGRGWYSSNSRAVLETLIAIGPE-ENAGINGGNQRLELRGNEMRLSKGTMDESEKKVIKVGKSSCVVDMTSGGGGGTGGGGFKDNCDGERVCRICHLSSEGLLEATDAIATATTNSMD 277          
The following BLAST results are available for this feature:
BLAST of GT624524 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
C6TDV1_SOYBN2.645e-4362.67Putative uncharacterized protein OS=Glycine max PE... [more]
B9I1J0_POPTR3.725e-1334.60Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9S8B4_RICCO5.947e-1130.48Putative uncharacterized protein OS=Ricinus commun... [more]
B9H2G3_POPTR4.262e-929.68Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT624524 ID=GT624524; Name=GT624524; organism=Lens culinaris; type=EST; length=755bp
ATGCACTCAATCTCTTGTATTTTTTCTCACCATTTTTCAGTTACTTTCTT
CACCTAACCTTGCACTTTTCAATCTAAATTCATAGTATCGCGCACTCTTT
CCAAGAGCGTCTTTTGCTTCGATTCAAACATACCCAGATTCAGTTTATTT
TCTAAAGTTGTACATTTTCAGGAAGCAAGCAAAGGTAGTAGTGAAATGTT
GGATCATGTTGATAAAGGGGTTAACGAGAATTCGAGTCGTTTAGTTGAAG
GAGTTGCAACTGATGCAGGAGCTGGACATAGCTTGGGTGGTAGGGTTAGT
GTATGCGATGATCTTGGATCGAATGAGGGGCTAAAGGAGATACCTTTAGA
AGTTAAGAGTCCGAACAAGAACGTTGGCGGTGATCCTGGAAAAATCAACG
ATGAATTGCGCGGGTTTGATCAAGGGACTAGTTATAATTCAAGTGATTTG
GTTAATGGGGAAGCACTTGAGACCCGTGTTGTAATAGATTCTTCTGCTCA
GGATGAGTCTGTCCATGGAGAAAACAGAAAATTAGAAGCTAAAACTAATG
AATCAAGGTTGGACAAGCTATCGATTAAAGTACCGAAAGGGGTGTCTGAG
ACCGATAAAAATTCGTGTGTGATTGATGTGAATTGTGGCAGCTGCAAAGA
TTTTAGTGAGAATTTGGATGGTGAAACTATTTGTAGGATTTGCCATTTGG
CATCTGGGCAACCATTAGTAGAAACTGCTGTTGGAACTCCAAATAGTGCT
GATGA
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