GT625497

EST Overview
NameGT625497
Unique NameGT625497
TypeEST
OrganismLens culinaris (lentil)
Sequence length754
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT625497 vs. TrEMBL
Match: Q2HVX3_MEDTR (Asp/Glu racemase OS=Medicago truncatula GN=MtrDRAFT_AC148340g3v2 PE=4 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 2.945e-103
Identity = 192/214 (89.72%), Postives = 200/214 (93.46%), Query Frame = 3
Query:  111 MFAMSLFYQSQTLLGCVSILNPNLNPRYLCLCKSRSWKVLSTPPSSVKLNADEGGRFSKSNVVEIKNDFVTPFGYQGTTVGIIGGMSVDATLNFLRKLVELSSQDGQNPIPFLLCSDPILNKELLSYERSLESFKLDSSDIVQSLRNKRVFLENSGARCIVMPCNVSHSWYEQVSNGCSVPFLHMADCVAQELKEAKLKPLEAGSPLRIGVLAT 752
            M AMSL YQSQTL G VSILNPNLNPRYLC  KSRSWKVLSTPPSSV LNADE G+FSK+ V  ++ND V+PFGYQGTTVGIIGGMSVDATLNFLRKLVELSSQDGQNPIPFLLCSDPILNKELLSYERSLESFK+DSS IVQSLRNKRVFLENSGARCIVMPCNVSHSWYEQVS GCSVPFLHMA+CVA+ELKEAKLKPLEAGSPLRIGVLAT
Sbjct:    1 MLAMSLCYQSQTLFGFVSILNPNLNPRYLC--KSRSWKVLSTPPSSVILNADESGKFSKNLVGSVRNDSVSPFGYQGTTVGIIGGMSVDATLNFLRKLVELSSQDGQNPIPFLLCSDPILNKELLSYERSLESFKVDSSQIVQSLRNKRVFLENSGARCIVMPCNVSHSWYEQVSIGCSVPFLHMAECVAKELKEAKLKPLEAGSPLRIGVLAT 212          
BLAST of GT625497 vs. TrEMBL
Match: C6T0I4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 1.210e-64
Identity = 141/214 (65.89%), Postives = 158/214 (73.83%), Query Frame = 3
Query:  120 MSLFYQSQTLLGCVSILNPNLNPRYLCLCKSRSWKVLSTPPSSVKLNADEGGRFS-KSNVVEIKNDFVTPFGYQGTTVGIIGGMSVDATLNFLRKLVELSSQDGQNPIPFLLCSDPILNKELLSYERSL--------ESFKLDSSDIVQSLRNKRVFLENSGARCIVMPCNVSHSWYEQVSNGCSVPFLHMADCVAQELKEAKLKPLEAGSPLR 734
            MSL Y  QTLL    +  P+   RYL   K+R   V +TPPSSV LNAD  G+FS K +V  + +    PF  Q + VGIIGG+SVDATL FLRKLVE SSQDG N  PF+LCSDP+L+KELLSYERS         E+ KLDSS IVQ+LRNKRVFLENSG  CIVMPCNVSHSWYEQVS GCSVP  HMA+CVA+ELKEAKLKPLEAGSPLR
Sbjct:    5 MSLSYPFQTLLLGCCVTTPSR--RYLS--KTRRCLVQATPPSSVILNADGSGKFSEKLHVPNLDSGRGAPFVIQRSAVGIIGGVSVDATLKFLRKLVEFSSQDGVNSTPFVLCSDPLLSKELLSYERSYFVSSTSKAENLKLDSSPIVQTLRNKRVFLENSGTSCIVMPCNVSHSWYEQVSEGCSVPVFHMAECVAKELKEAKLKPLEAGSPLR 214          
BLAST of GT625497 vs. TrEMBL
Match: B9RV29_RICCO (Racemase and epimerase, acting on amino acids and derivatives, putative OS=Ricinus communis GN=RCOM_0898340 PE=4 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.528e-56
Identity = 118/190 (62.11%), Postives = 142/190 (74.74%), Query Frame = 3
Query:  207 KSRSWKVLSTPPSSVKLNADEGGRFSKSNVVE-IKNDFVTPFGYQGTTVGIIGGMSVDATLNFLRKLVELSSQDGQNPIPFLLCSDPILNKELLSYERSL--------ESFKLDSSDIVQSLRNKRVFLENSGARCIVMPCNVSHSWYEQVSNGCSVPFLHMADCVAQELKEAKLKPLEAGSPLRIGVLA 749
            K+RS  V + PPSSV L+ DE GRF  S       +D       Q  TVGIIGG SV+  LNFL+KLV+ SS+DG++ +PF+LCSDP+LNKELLS+ER          E  KLD + IV++LR+KRVFLE SGARCIVMPC++SHSW+EQVS GCS+ FLHM +CVA+ELKEAKLKPLEAGSPLRIGVLA
Sbjct:   31 KARSNLVQAVPPSSVILHTDESGRFRGSKKSSGSTSDSSDLLLNQANTVGIIGGTSVNCALNFLKKLVQWSSEDGKDSLPFVLCSDPVLNKELLSHERDFFPSIGRQKEYSKLDHAQIVENLRSKRVFLERSGARCIVMPCHISHSWHEQVSKGCSIHFLHMGECVARELKEAKLKPLEAGSPLRIGVLA 220          
BLAST of GT625497 vs. TrEMBL
Match: A5AFE5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015733 PE=4 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.482e-54
Identity = 111/202 (54.95%), Postives = 146/202 (72.28%), Query Frame = 3
Query:  189 RYLCLCKSRSWKVLSTPPSSVKLNADEGGRF------SKSNVVEIKNDFVTPFGYQGTTVGIIGGMSVDATLNFLRKLVELSSQDGQNPIPFLLCSDPILNKELLSYERS--------LESFKLDSSDIVQSLRNKRVFLENSGARCIVMPCNVSHSWYEQVSNGCSVPFLHMADCVAQELKEAKLKPLEAGSPLRIGVLAT 752
            ++  L ++    +L+ PPSS  L  DE G        S S+     +D  + F  Q TTVGIIGG+SVD+TLNFL+KLV+ SS+DG + +PF+LCSDP+LNK+LLS+ERS         ES ++D + IV +L++KR FLE SG +CIVMPC++SHSW++++S G SVPFLHM +CVA+ELK AKLKPLEAGSPLRIGVLAT
Sbjct:   20 KHXILXRTMKNPILAVPPSSTLLQTDESGNLPESKNSSGSDAASTNSDSASLFINQATTVGIIGGVSVDSTLNFLKKLVQWSSKDGGDSLPFVLCSDPVLNKQLLSHERSHFPLLSTKRESSRMDHTPIVGNLQSKRAFLERSGVQCIVMPCHISHSWHDEISRGXSVPFLHMGECVARELKNAKLKPLEAGSPLRIGVLAT 221          
BLAST of GT625497 vs. TrEMBL
Match: B9GWD2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_645866 PE=4 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.768e-53
Identity = 119/224 (53.12%), Postives = 153/224 (68.30%), Query Frame = 3
Query:  111 MFAMSLFYQSQTLLGCVSILNPNLNPRYLCLCKSRSWKVLSTPPSSVKLNADEGGRF--SKSNVVEIKNDFVTPFGYQGTTVGIIGGMSVDATLNFLRKLVELSSQDGQNPIPFLLCSDPILNKELLSYERSL--------ESFKLDSSDIVQSLRNKRVFLENSGARCIVMPCNVSHSWYEQVSNGCSVPFLHMADCVAQELKEAKLKPLEAGSPLRIGVLAT 752
            MF  SL     TL  C  + + N    +  L KSR   VL+ PPSS+ L+ DE G+F  SK        D       Q  TVGIIGG+SV++ LNFL+KLV+ SS++G++  PF+LCSDP+LNKELLS+ER+         E    D S I ++L+NKRVFLE SG +CIVMPC++ HSW+++VS GCS+PFLHM +CVA+ELKEAKLKPLEAGSPLRIG+LA+
Sbjct:    1 MFDGSLAMPFHTLHPCHLLGHVNT---HRALHKSRLQPVLAIPPSSILLHTDESGKFPDSKKGSGLRGRDSSDSLLSQANTVGIIGGISVNSALNFLKKLVQGSSKEGKDCFPFVLCSDPVLNKELLSHERNSCPCPRRHNEKSPSDHSAIAENLQNKRVFLEKSGVQCIVMPCHILHSWHDEVSKGCSLPFLHMGECVARELKEAKLKPLEAGSPLRIGLLAS 221          
BLAST of GT625497 vs. TrEMBL
Match: D7U0Y3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017270001 PE=4 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 5.455e-49
Identity = 96/145 (66.21%), Postives = 122/145 (84.14%), Query Frame = 3
Query:  342 TTVGIIGGMSVDATLNFLRKLVELSSQDGQNPIPFLLCSDPILNKELLSYERS--------LESFKLDSSDIVQSLRNKRVFLENSGARCIVMPCNVSHSWYEQVSNGCSVPFLHMADCVAQELKEAKLKPLEAGSPLRIGVLAT 752
            TTVGIIGG+SVD+TLNFL+KLV+ SS+DG + +PF+LCSDP+LNK+LLS+ERS         ES ++D + IV +L++KR FLE SG +CIVMPC++SHSW++++S G SVPFLHM +CVA+ELK AKLKPLEAGSPLRIGVLAT
Sbjct:  188 TTVGIIGGVSVDSTLNFLKKLVQWSSKDGGDSLPFVLCSDPVLNKQLLSHERSHFPLLSTKRESSRMDHTPIVGNLQSKRAFLERSGVQCIVMPCHISHSWHDEISRGSSVPFLHMGECVARELKNAKLKPLEAGSPLRIGVLAT 332          
BLAST of GT625497 vs. TrEMBL
Match: D7KCR1_ARALY (Aspartate-glutamate racemase family OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471741 PE=4 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 7.372e-46
Identity = 99/203 (48.77%), Postives = 137/203 (67.49%), Query Frame = 3
Query:  204 CKSRSWKVLSTPPSSVKLNADEGGRF------------SKSNVVEIKNDFVTPFGYQGTTVGIIGGMSVDATLNFLRKLVELSSQDGQNPIPFLLCSDPILNKELLSYERS--------LESFKLDSSDIVQSLRNKRVFLENSGARCIVMPCNVSHSWYEQVSNGCSVPFLHMADCVAQELKEAKLKPLEAGSPLRIGVLAT 752
            CK R  +VL+ PPSS+ L+ DE                S++++  +  D +     Q  TVGIIGG+S D+TL F++KLV+ SS+DG++ +PF+LCSDP LNKELL YE +         ES  +D   IV +LRNKR +LE  GA+ I+MPC+++H WYE+V  G SVP LHM +C+A+EL+EAK+KPLEAG+PLR+GV+AT
Sbjct:   24 CKVRLSRVLAMPPSSILLHMDESNDLPKPKKGFCPSEDSRNSLNSLSADSLLR---QANTVGIIGGVSTDSTLKFVKKLVDWSSKDGKSSLPFVLCSDPALNKELLLYEENSYPSLYHRAESTPVDPKLIVGNLRNKRRYLEKCGAKLILMPCHIAHIWYEEVCEGSSVPLLHMGECIAKELQEAKMKPLEAGNPLRVGVMAT 223          
BLAST of GT625497 vs. TrEMBL
Match: Q9XI28_ARATH (F9L1.36 protein OS=Arabidopsis thaliana GN=At1g15410 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.258e-45
Identity = 102/219 (46.58%), Postives = 142/219 (64.84%), Query Frame = 3
Query:  171 NPNLNPRYLCL-----CKSRSWKVLSTPPSSVKLNADEGGRF------------SKSNVVEIKNDFVTPFGYQGTTVGIIGGMSVDATLNFLRKLVELSSQDGQNPIPFLLCSDPILNKELLSYERSL--------ESFKLDSSDIVQSLRNKRVFLENSGARCIVMPCNVSHSWYEQVSNGCSVPFLHMADCVAQELKEAKLKPLEAGSPLRIGVLAT 752
            NP+    +LC      C+ R  +VL+ PPSSV L+ DE                S++++  +  D +     Q  TVGIIGG+S D+TL F++KLV+ SS DG++ +PF+LCSDP LNKELL YE +         ES  +D   IV++LRNKR +LE  GA+ I+MPC+++H WYE+V  G  VP LHM +C+A+EL+EAK+KPLEAG+PLR+GV+AT
Sbjct:    8 NPSHGLAHLCYSSRVSCRVRLSRVLAMPPSSVLLHMDESNDLPKPKKGFCLSEDSRNSLNSLPADSLLR---QANTVGIIGGVSTDSTLKFVKKLVDWSSNDGKSSLPFVLCSDPALNKELLLYEENSYPSLYHREESTPVDPKLIVENLRNKRRYLERCGAKLILMPCHIAHIWYEEVCEGSLVPLLHMGECIAKELQEAKMKPLEAGNPLRVGVMAT 223          
BLAST of GT625497 vs. TrEMBL
Match: Q0WLN1_ARATH (Putative uncharacterized protein At1g15410 OS=Arabidopsis thaliana GN=At1g15410 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.258e-45
Identity = 102/219 (46.58%), Postives = 142/219 (64.84%), Query Frame = 3
Query:  171 NPNLNPRYLCL-----CKSRSWKVLSTPPSSVKLNADEGGRF------------SKSNVVEIKNDFVTPFGYQGTTVGIIGGMSVDATLNFLRKLVELSSQDGQNPIPFLLCSDPILNKELLSYERSL--------ESFKLDSSDIVQSLRNKRVFLENSGARCIVMPCNVSHSWYEQVSNGCSVPFLHMADCVAQELKEAKLKPLEAGSPLRIGVLAT 752
            NP+    +LC      C+ R  +VL+ PPSSV L+ DE                S++++  +  D +     Q  TVGIIGG+S D+TL F++KLV+ SS DG++ +PF+LCSDP LNKELL YE +         ES  +D   IV++LRNKR +LE  GA+ I+MPC+++H WYE+V  G  VP LHM +C+A+EL+EAK+KPLEAG+PLR+GV+AT
Sbjct:    8 NPSHGLAHLCYSSRVSCRVRLSRVLAMPPSSVLLHMDESNDLPKPKKGFCLSEDSRNSLNSLPADSLLR---QANTVGIIGGVSTDSTLKFVKKLVDWSSNDGKSSLPFVLCSDPALNKELLLYEENSYPSLYHREESTPVDPKLIVENLRNKRRYLERCGAKLILMPCHIAHIWYEEVCEGSLVPLLHMGECIAKELQEAKMKPLEAGNPLRVGVMAT 223          
BLAST of GT625497 vs. TrEMBL
Match: A5BHI0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011681 PE=4 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.879e-41
Identity = 95/198 (47.98%), Postives = 125/198 (63.13%), Query Frame = 3
Query:  204 CKSRSWKVLSTPPSSVKLNADEGGRFSKSNVV----------EIKNDFVTPFGYQGTTVGIIGGMSVDATLNFLRKLVELSSQDGQNPIPFLLCSDPILNKELLS------YERSLESFKLDSSDIVQSLRNKRVFLENSGARCIVMPCNVSHSWYEQVSNGCSVPFLHMADCVAQELKEAKLKPLEAGSPLRIGVLA 749
            C  RS    +   SSV +  DE G   +S  +          +  N  +T    Q  TVGI+GG+SV +TL FL KLV  SS+ G+  +PF++CSDP LN+EL S      +      F+LD   IV++LR KR FLE SGARCIVMPC+++H+W+ +VS GC +PFLH+ +CVA ELK+AK KPLEAGS +RIGVLA
Sbjct:   18 CSGRSNPSAAVQLSSVFIQTDESGNTPESKKILGPVAAVARCQAPNSLLT----QANTVGILGGVSVFSTLIFLEKLVWWSSRHGEESLPFVVCSDPTLNRELASPSLSPFFRGKNAQFQLDHGPIVENLRCKRAFLEQSGARCIVMPCHLAHAWHSEVSKGCPLPFLHVGECVASELKKAKFKPLEAGSNVRIGVLA 211          
BLAST of GT625497 vs. TAIR peptide
Match: AT1G15410.1 (| Symbols: | aspartate-glutamate racemase family | chr1:5299577-5300681 FORWARD LENGTH=330)

HSP 1 Score: 187.193 bits (474), Expect = 8.297e-48
Identity = 102/219 (46.58%), Postives = 142/219 (64.84%), Query Frame = 3
Query:  171 NPNLNPRYLCL-----CKSRSWKVLSTPPSSVKLNADEGGRF------------SKSNVVEIKNDFVTPFGYQGTTVGIIGGMSVDATLNFLRKLVELSSQDGQNPIPFLLCSDPILNKELLSYERSL--------ESFKLDSSDIVQSLRNKRVFLENSGARCIVMPCNVSHSWYEQVSNGCSVPFLHMADCVAQELKEAKLKPLEAGSPLRIGVLAT 752
            NP+    +LC      C+ R  +VL+ PPSSV L+ DE                S++++  +  D +     Q  TVGIIGG+S D+TL F++KLV+ SS DG++ +PF+LCSDP LNKELL YE +         ES  +D   IV++LRNKR +LE  GA+ I+MPC+++H WYE+V  G  VP LHM +C+A+EL+EAK+KPLEAG+PLR+GV+AT
Sbjct:    8 NPSHGLAHLCYSSRVSCRVRLSRVLAMPPSSVLLHMDESNDLPKPKKGFCLSEDSRNSLNSLPADSLLR---QANTVGIIGGVSTDSTLKFVKKLVDWSSNDGKSSLPFVLCSDPALNKELLLYEENSYPSLYHREESTPVDPKLIVENLRNKRRYLERCGAKLILMPCHIAHIWYEEVCEGSLVPLLHMGECIAKELQEAKMKPLEAGNPLRVGVMAT 223          
The following BLAST results are available for this feature:
BLAST of GT625497 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q2HVX3_MEDTR2.945e-10389.72Asp/Glu racemase OS=Medicago truncatula GN=MtrDRAF... [more]
C6T0I4_SOYBN1.210e-6465.89Putative uncharacterized protein OS=Glycine max PE... [more]
B9RV29_RICCO3.528e-5662.11Racemase and epimerase, acting on amino acids and ... [more]
A5AFE5_VITVI1.482e-5454.95Putative uncharacterized protein OS=Vitis vinifera... [more]
B9GWD2_POPTR4.768e-5353.13Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7U0Y3_VITVI5.455e-4966.21Whole genome shotgun sequence of line PN40024, sca... [more]
D7KCR1_ARALY7.372e-4648.77Aspartate-glutamate racemase family OS=Arabidopsis... [more]
Q9XI28_ARATH1.258e-4546.58F9L1.36 protein OS=Arabidopsis thaliana GN=At1g154... [more]
Q0WLN1_ARATH1.258e-4546.58Putative uncharacterized protein At1g15410 OS=Arab... [more]
A5BHI0_VITVI1.879e-4147.98Putative uncharacterized protein OS=Vitis vinifera... [more]
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BLAST of GT625497 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G15410.18.297e-4846.58| Symbols: | aspartate-glutamate racemase family ... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001920Asp/Glu racemaseGENE3D3.40.50.1860no descriptioncoord: 82..202
score: 3.5
IPR001920Asp/Glu racemaseSUPERFAMILY53681Aspartate/glutamate racemasecoord: 82..200
score: 2.1
IPR015942Asp/Glu/hydantoin racemasePFAMPF01177Asp_Glu_racecoord: 86..217
score: 3.6
NoneNo IPR availableSEGsegsegcoord: 44..56
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT625497 ID=GT625497; Name=GT625497; organism=Lens culinaris; type=EST; length=754bp
CATTGAATCTCTTACTTTAGAACCCCTAATTTAAATGGGGTTCTAAAATT
TTTCATTGTGCAAAAGAAGAATAAGAATAAGAAACCAGTTGGGTTGTTTG
ATTTGATGTGATGTTTGCAATGTCTTTGTTTTACCAATCACAAACTTTAT
TGGGATGTGTAAGTATTCTTAATCCTAATCTTAATCCTAGGTACTTGTGT
TTGTGCAAATCAAGGTCATGGAAAGTTCTATCTACACCCCCATCTTCAGT
TAAATTGAATGCAGATGAAGGTGGGAGATTTTCAAAGTCAAATGTTGTGG
AAATTAAGAATGATTTTGTTACTCCTTTTGGTTATCAAGGAACAACTGTT
GGAATCATTGGAGGCATGTCTGTTGATGCAACACTCAATTTTCTAAGAAA
ACTTGTGGAGTTGAGTTCACAAGATGGACAAAATCCTATTCCTTTTTTGC
TTTGTTCTGATCCAATTTTGAATAAGGAGCTTCTTTCCTATGAAAGGAGC
TTGGAAAGTTTTAAACTTGATTCTTCTGATATTGTGCAGAGTCTTAGAAA
TAAAAGGGTTTTTCTTGAGAATTCCGGGGCTCGTTGCATAGTCATGCCTT
GTAATGTTTCGCATTCTTGGTATGAACAAGTATCTAATGGATGTTCTGTA
CCTTTTCTTCATATGGCTGACTGTGTTGCTCAGGAACTTAAGGAAGCTAA
GTTAAAGCCACTTGAAGCTGGTAGTCCTTTGAGGATTGGAGTCCTTGCAA
CAAA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR001920Asp/Glu_race
IPR015942Asp/Glu/hydantoin_racemase