GT626269
EST Overview
Unigenes
This EST is part of the following unigenes:
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT626269 vs. TrEMBL
Match: D7T103_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_85.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036698001 PE=4 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 2.233e-41 Identity = 87/146 (59.59%), Postives = 111/146 (76.03%), Query Frame = 1 Query: 4 ADVERQLSECSKSLQWNKDRVRELEMKLKSMQEQLISAKDAAAANEEQLSAELSTVNKLNELYKESSEEWSRKAADLEGAVKAMESHLKQVEDDYKDRLEKEFSIRKQFXXXXXXXXXXXXXXXXXXXTSKKMNELSILPLRTFST 441 +DVER+L+ECS SL+WNK+RV+ELEMKL SMQ++L S+KDAAAANE++LSAE+ TVNKL ELYKESSEEWSRKA +LEG +KA+E+HL QVE+DYK+RLEKE RK+ TS++ NEL++LPL + T Sbjct: 226 SDVERRLNECSSSLKWNKERVKELEMKLTSMQQELCSSKDAAAANEQRLSAEIMTVNKLVELYKESSEEWSRKAGELEGVIKALETHLIQVENDYKERLEKEVFARKELEKEAADLKGKLEKCEAEMETSRRANELNLLPLSSLIT 371
BLAST of GT626269 vs. TrEMBL
Match: B9RYK2_RICCO (Nucleoprotein TPR, putative OS=Ricinus communis GN=RCOM_1128370 PE=4 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 9.383e-40 Identity = 83/148 (56.08%), Postives = 109/148 (73.65%), Query Frame = 1 Query: 1 LADVERQLSECSKSLQWNKDRVRELEMKLKSMQEQLISAKDAAAANEEQLSAELSTVNKLNELYKESSEEWSRKAADLEGAVKAMESHLKQVEDDYKDRLEKEFSIRKQFXXXXXXXXXXXXXXXXXXXTSKKMNELSILPLRTFSTE 444 LADV+R+ +ECS SL+WNK+RV+ELE+KL SMQE+L S +DAAAANEE+ SAE+ST+NKL ELYKESSEEWS+KA +LEG +KA+E+HL QVE+DYK+RL+KE R Q + +K NEL++LPL + + E Sbjct: 225 LADVKRRSNECSSSLKWNKERVKELEIKLASMQEELCSHRDAAAANEERFSAEISTINKLVELYKESSEEWSKKAGELEGVIKALETHLNQVENDYKERLDKEICARNQLQKEAADLKNKLANCEAEVESGRKANELNLLPLGSLTIE 372
BLAST of GT626269 vs. TrEMBL
Match: B9HI19_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_820461 PE=4 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.225e-39 Identity = 86/151 (56.95%), Postives = 113/151 (74.83%), Query Frame = 1 Query: 1 LADVERQLSECSKSLQWNKDRVRELEMKLKSMQEQLISAKDAAAANEEQLSAELSTVNKLNELYKESSEEWSRKAADLEGAVKAMESHLKQVEDDYKDRLEKEFSIRKQFXXXXXXXXXXXXXXXXXXXTSKKMNELSILPLRTFSTEPYV 453 LAD ER+ +E S S + + +RV+ELE+KL S+QE+L S++DAAAANEE+LSAELSTVNKL ELYKESSEEWS+KA +LEG +KA+E+HL QVE+DYK+RLEKE S RKQ +S+K NELS+LPL +++TE ++ Sbjct: 225 LADAERRFNESSSSSKRSMERVKELELKLTSVQEELCSSRDAAAANEERLSAELSTVNKLVELYKESSEEWSQKAGELEGVIKALETHLSQVENDYKERLEKEISARKQLEKEAGDLKDKLERCEADIESSRKTNELSLLPLNSYTTERWM 375
BLAST of GT626269 vs. TrEMBL
Match: Q6Z7R9_ORYSJ (Os02g0741500 protein OS=Oryza sativa subsp. japonica GN=P0516G10.28 PE=4 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.574e-31 Identity = 71/142 (50.00%), Postives = 100/142 (70.42%), Query Frame = 1 Query: 1 LADVERQLSECSKSLQWNKDRVRELEMKLKSMQEQLISAKDAAAANEEQLSAELSTVNKLNELYKESSEEWSRKAADLEGAVKAMESHLKQVEDDYKDRLEKEFSIRKQFXXXXXXXXXXXXXXXXXXXTSKKMNELSILPL 426 +A++ER+ SE S SL+ +K+RV ELE ++ M+++L S KDAAAANE++L+AELSTV KL EL+KESSEEWS+KA +LEG +KA+E+HL QVED+YK++LEKE S ++ ++K +ELS PL Sbjct: 225 VAELERETSESSSSLRRSKERVSELEQRVSYMEKELCSTKDAAAANEQRLAAELSTVMKLAELHKESSEEWSKKAGELEGVIKALETHLTQVEDEYKEKLEKETSAKRDLEMEATYLKQKLEKCESDLENTRKSSELSFTPL 366
BLAST of GT626269 vs. TrEMBL
Match: B9F2X6_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_08332 PE=4 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.574e-31 Identity = 71/142 (50.00%), Postives = 100/142 (70.42%), Query Frame = 1 Query: 1 LADVERQLSECSKSLQWNKDRVRELEMKLKSMQEQLISAKDAAAANEEQLSAELSTVNKLNELYKESSEEWSRKAADLEGAVKAMESHLKQVEDDYKDRLEKEFSIRKQFXXXXXXXXXXXXXXXXXXXTSKKMNELSILPL 426 +A++ER+ SE S SL+ +K+RV ELE ++ M+++L S KDAAAANE++L+AELSTV KL EL+KESSEEWS+KA +LEG +KA+E+HL QVED+YK++LEKE S ++ ++K +ELS PL Sbjct: 215 VAELERETSESSSSLRRSKERVSELEQRVSYMEKELCSTKDAAAANEQRLAAELSTVMKLAELHKESSEEWSKKAGELEGVIKALETHLTQVEDEYKEKLEKETSAKRDLEMEATYLKQKLEKCESDLENTRKSSELSFTPL 356
BLAST of GT626269 vs. TrEMBL
Match: B8AID9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08886 PE=4 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.574e-31 Identity = 71/142 (50.00%), Postives = 100/142 (70.42%), Query Frame = 1 Query: 1 LADVERQLSECSKSLQWNKDRVRELEMKLKSMQEQLISAKDAAAANEEQLSAELSTVNKLNELYKESSEEWSRKAADLEGAVKAMESHLKQVEDDYKDRLEKEFSIRKQFXXXXXXXXXXXXXXXXXXXTSKKMNELSILPL 426 +A++ER+ SE S SL+ +K+RV ELE ++ M+++L S KDAAAANE++L+AELSTV KL EL+KESSEEWS+KA +LEG +KA+E+HL QVED+YK++LEKE S ++ ++K +ELS PL Sbjct: 225 VAELERETSESSSSLRRSKERVSELEQRVSYMEKELCSTKDAAAANEQRLAAELSTVMKLAELHKESSEEWSKKAGELEGVIKALETHLTQVEDEYKEKLEKETSAKRDLEMEATYLKQKLEKCESDLENTRKSSELSFTPL 366
BLAST of GT626269 vs. TrEMBL
Match: C5XYX0_SORBI (Putative uncharacterized protein Sb04g028320 OS=Sorghum bicolor GN=Sb04g028320 PE=4 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.173e-20 Identity = 57/148 (38.51%), Postives = 85/148 (57.43%), Query Frame = 1 Query: 1 LADVERQLSECSKSLQWNKDRVRELEMKLKSMQEQLISAKDAAAANEEQLSAELSTVNKLNELYKESSEEWSRKAADLEGAVKAMESHLKQVEDDYKDRLEKEFSIRKQFXXXXXXXXXXXXXXXXXXXTSKKMNELSILPLRTFSTE 444 +A++ER++SE S SL+ +KDR+ ELE +L M++ V KL EL+KESSEEWS+KA +LEG +KA+E+HL QVED+YK+RLEKE R+ ++K +ELS++PL + + + Sbjct: 225 IAELEREISESSSSLRRSKDRISELEQRLSYMEK----------------------VMKLAELHKESSEEWSKKAGELEGVIKALETHLTQVEDEYKERLEKESLSRRDLEKEAVNLKQKLEKCELDLENTRKSSELSLIPLTSIAAD 350
BLAST of GT626269 vs. TrEMBL
Match: A9RGQ8_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_113891 PE=4 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.838e-20 Identity = 48/109 (44.04%), Postives = 80/109 (73.39%), Query Frame = 1 Query: 1 LADVERQLSECSKSLQWNKDRVRELEMKLKSMQEQLISAKDAAAANEEQLSAELSTVNKLNELYKESSEEWSRKAADLEGAVKAMESHLKQVEDDYKDRLEKEFSIRKQ 327 L++ ER + + +++LQ K+ ELE KL ++E+L K+ +A EEQ +AE++T KL ELYK+SS++WS+K+ +LEG +KA+E+HL Q+E DYK++L+ E + R++ Sbjct: 225 LSEAERSVKDTTQTLQRTKEYNLELESKLSQVREELKFLKEDSAVKEEQFAAEVATAAKLLELYKQSSDDWSKKSHELEGVIKALETHLNQIEADYKEKLKTEQNAREE 333
BLAST of GT626269 vs. TrEMBL
Match: A5B0H5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006234 PE=4 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.722e-17 Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 1 Query: 169 VNKLNELYKESSEEWSRKAADLEGAVKAMESHLKQVEDDYKDRLEKEFSIRKQFXXXXXXXXXXXXXXXXXXXTSKKMNELSILPLRTFST 441 VNKL ELYKESSEEWSRKA +LEG +KA+E+HL QVE+DYK+RLEKE RK+ TS++ NEL++LPL + T Sbjct: 3 VNKLVELYKESSEEWSRKAGELEGVIKALETHLIQVENDYKERLEKEVFARKELEKEAADLKGKLEKCEAEMETSRRANELNLLPLSSLIT 93
BLAST of GT626269 vs. TrEMBL
Match: A5B0H8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006237 PE=4 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.249e-17 Identity = 50/95 (52.63%), Postives = 69/95 (72.63%), Query Frame = 1 Query: 4 ADVERQLSECSKSLQWNKDRVRELEMKLKSMQEQLISAKDAAAANEEQLSAELSTVNKLNE----LYKESSEEWSRKAADLEGAVKAMESHLKQV 276 +DVER+L+ECS SL+WNK+RV+ELEMKL SMQ++L S+KDAAAANE++LSAE+ TV + +E S W K +L+ V A++S L +V Sbjct: 157 SDVERRLNECSSSLKWNKERVKELEMKLTSMQQELCSSKDAAAANEQRLSAEIMTVTRGSEDLLRAKGGSKVLWREKGVELKSYVDAVKSSLGRV 251
BLAST of GT626269 vs. SwissProt
Match: NUA_ARATH (Nuclear-pore anchor OS=Arabidopsis thaliana GN=NUA PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.266e-33 Identity = 71/146 (48.63%), Postives = 94/146 (64.38%), Query Frame = 1 Query: 1 LADVERQLSECSKSLQWNKDRVRELEMKLKSMQEQLISAKDAAAANEEQLSAELSTVNKLNELYKESSEEWSRKAADLEGAVKAMESHLKQVEDDYKDRLEKEFSIRKQFXXXXXXXXXXXXXXXXXXXTSKKMNELSILPLRTFS 438 L DVE+ ECS SL W+K+R+RELE K+ S+QE L S KDAA EEQ +AEL T NKL +LYKESSEEWSRKA +LEG +KA+E+ L QVE YK+RL+KE S ++ ++K +EL+++P F+ Sbjct: 226 LVDVEKNYIECSSSLNWHKERLRELETKIGSLQEDLSSCKDAATTTEEQYTAELFTANKLVDLYKESSEEWSRKAGELEGVIKALEARLSQVESSYKERLDKEVSTKQLLEKENGDLKQKLEKCEAEIEKTRKTDELNLIPFSNFT 371
BLAST of GT626269 vs. TAIR peptide
Match: AT1G79280.2 (| Symbols: NUA | nuclear pore anchor | chr1:29819176-29832809 REVERSE LENGTH=2115) HSP 1 Score: 140.969 bits (354), Expect = 6.346e-34 Identity = 71/146 (48.63%), Postives = 94/146 (64.38%), Query Frame = 1 Query: 1 LADVERQLSECSKSLQWNKDRVRELEMKLKSMQEQLISAKDAAAANEEQLSAELSTVNKLNELYKESSEEWSRKAADLEGAVKAMESHLKQVEDDYKDRLEKEFSIRKQFXXXXXXXXXXXXXXXXXXXTSKKMNELSILPLRTFS 438 L DVE+ ECS SL W+K+R+RELE K+ S+QE L S KDAA EEQ +AEL T NKL +LYKESSEEWSRKA +LEG +KA+E+ L QVE YK+RL+KE S ++ ++K +EL+++P F+ Sbjct: 226 LVDVEKNYIECSSSLNWHKERLRELETKIGSLQEDLSSCKDAATTTEEQYTAELFTANKLVDLYKESSEEWSRKAGELEGVIKALEARLSQVESSYKERLDKEVSTKQLLEKENGDLKQKLEKCEAEIEKTRKTDELNLIPFSNFT 371
BLAST of GT626269 vs. TAIR peptide
Match: AT1G79280.3 (| Symbols: NUA | nuclear pore anchor | chr1:29819176-29832809 REVERSE LENGTH=2094) HSP 1 Score: 140.969 bits (354), Expect = 6.346e-34 Identity = 71/146 (48.63%), Postives = 94/146 (64.38%), Query Frame = 1 Query: 1 LADVERQLSECSKSLQWNKDRVRELEMKLKSMQEQLISAKDAAAANEEQLSAELSTVNKLNELYKESSEEWSRKAADLEGAVKAMESHLKQVEDDYKDRLEKEFSIRKQFXXXXXXXXXXXXXXXXXXXTSKKMNELSILPLRTFS 438 L DVE+ ECS SL W+K+R+RELE K+ S+QE L S KDAA EEQ +AEL T NKL +LYKESSEEWSRKA +LEG +KA+E+ L QVE YK+RL+KE S ++ ++K +EL+++P F+ Sbjct: 226 LVDVEKNYIECSSSLNWHKERLRELETKIGSLQEDLSSCKDAATTTEEQYTAELFTANKLVDLYKESSEEWSRKAGELEGVIKALEARLSQVESSYKERLDKEVSTKQLLEKENGDLKQKLEKCEAEIEKTRKTDELNLIPFSNFT 371
BLAST of GT626269 vs. TAIR peptide
Match: AT1G79280.1 (| Symbols: NUA, AtTPR | nuclear pore anchor | chr1:29819176-29832809 REVERSE LENGTH=2093) HSP 1 Score: 140.969 bits (354), Expect = 6.346e-34 Identity = 71/146 (48.63%), Postives = 94/146 (64.38%), Query Frame = 1 Query: 1 LADVERQLSECSKSLQWNKDRVRELEMKLKSMQEQLISAKDAAAANEEQLSAELSTVNKLNELYKESSEEWSRKAADLEGAVKAMESHLKQVEDDYKDRLEKEFSIRKQFXXXXXXXXXXXXXXXXXXXTSKKMNELSILPLRTFS 438 L DVE+ ECS SL W+K+R+RELE K+ S+QE L S KDAA EEQ +AEL T NKL +LYKESSEEWSRKA +LEG +KA+E+ L QVE YK+RL+KE S ++ ++K +EL+++P F+ Sbjct: 226 LVDVEKNYIECSSSLNWHKERLRELETKIGSLQEDLSSCKDAATTTEEQYTAELFTANKLVDLYKESSEEWSRKAGELEGVIKALEARLSQVESSYKERLDKEVSTKQLLEKENGDLKQKLEKCEAEIEKTRKTDELNLIPFSNFT 371 The following BLAST results are available for this feature:
BLAST of GT626269 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT626269 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 1
BLAST of GT626269 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT626269 ID=GT626269; Name=GT626269; organism=Lens culinaris; type=EST; length=714bpback to top |