GT626719
EST Overview
Unigenes
This EST is part of the following unigenes:
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT626719 vs. TrEMBL
Match: Q8GTE6_CICAR (Transportin-like protein (Fragment) OS=Cicer arietinum GN=trn PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.839e-30 Identity = 70/99 (70.71%), Postives = 70/99 (70.71%), Query Frame = 2 Query: 185 CFQVKVNPSGALSSLVYMCKAIASWHVCCQHFLKCQSDLRFL*YNFFC*HV*EIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV 481 C VK NPSGALSSLVYMCKAIASWH EIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV Sbjct: 355 CAMVKANPSGALSSLVYMCKAIASWH--------------------------EIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV 427
BLAST of GT626719 vs. TrEMBL
Match: D7U509_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00023974001 PE=4 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.354e-29 Identity = 66/99 (66.67%), Postives = 70/99 (70.71%), Query Frame = 2 Query: 185 CFQVKVNPSGALSSLVYMCKAIASWHVCCQHFLKCQSDLRFL*YNFFC*HV*EIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV 481 C V+ NPSGALSSLVYMCKAIASWH EIRSEDLHNEVCQVLHGYKQMLRNGAW+QCMSALEPP+K+KLSKYQV Sbjct: 818 CAMVRANPSGALSSLVYMCKAIASWH--------------------------EIRSEDLHNEVCQVLHGYKQMLRNGAWEQCMSALEPPVKDKLSKYQV 890
BLAST of GT626719 vs. TrEMBL
Match: A5BTV3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033561 PE=4 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.470e-28 Identity = 65/96 (67.71%), Postives = 69/96 (71.88%), Query Frame = 2 Query: 194 VKVNPSGALSSLVYMCKAIASWHVCCQHFLKCQSDLRFL*YNFFC*HV*EIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV 481 V+ NPSGALSSLVYMCKAIASWH EIRSEDLHNEVCQVLHGYKQMLRNGAW+QCMSALEPP+K+KLSKYQV Sbjct: 459 VRANPSGALSSLVYMCKAIASWH--------------------------EIRSEDLHNEVCQVLHGYKQMLRNGAWEQCMSALEPPVKDKLSKYQV 528
BLAST of GT626719 vs. TrEMBL
Match: B9HR27_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_804102 PE=4 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.458e-26 Identity = 64/99 (64.65%), Postives = 68/99 (68.69%), Query Frame = 2 Query: 185 CFQVKVNPSGALSSLVYMCKAIASWHVCCQHFLKCQSDLRFL*YNFFC*HV*EIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV 481 C V+ NPSGALSSLV+MCKAIASWH EIRSE+LHNEVCQVLHGYKQMLRNGAWDQ MSALEPP+KEKL KYQV Sbjct: 814 CAMVRRNPSGALSSLVFMCKAIASWH--------------------------EIRSEELHNEVCQVLHGYKQMLRNGAWDQYMSALEPPVKEKLLKYQV 886
BLAST of GT626719 vs. TrEMBL
Match: B9H1L0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_818217 PE=4 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.248e-26 Identity = 63/99 (63.64%), Postives = 67/99 (67.68%), Query Frame = 2 Query: 185 CFQVKVNPSGALSSLVYMCKAIASWHVCCQHFLKCQSDLRFL*YNFFC*HV*EIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV 481 C V+ NPSGALSSLV+MCKAIASWH EIRS +LHNEVCQVLHGYKQMLRNGAWDQ MSALEPP+KEKL KYQV Sbjct: 816 CAMVRTNPSGALSSLVFMCKAIASWH--------------------------EIRSAELHNEVCQVLHGYKQMLRNGAWDQYMSALEPPVKEKLLKYQV 888
BLAST of GT626719 vs. TrEMBL
Match: D7L890_ARALY (Protein transporter OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_900019 PE=4 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.472e-18 Identity = 50/99 (50.51%), Postives = 63/99 (63.64%), Query Frame = 2 Query: 185 CFQVKVNPSGALSSLVYMCKAIASWHVCCQHFLKCQSDLRFL*YNFFC*HV*EIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV 481 C VKVNPSG +SSLV++C+AIASWH EIRSED+ NEV QVL+GYK ML N +W +C+SAL+PP+KE L++YQV Sbjct: 820 CAVVKVNPSGGVSSLVFICQAIASWH--------------------------EIRSEDVQNEVSQVLNGYKHMLGN-SWAECLSALDPPVKEMLARYQV 891
BLAST of GT626719 vs. TrEMBL
Match: Q8H2D6_ARATH (Transportin OS=Arabidopsis thaliana GN=TRN1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.110e-17 Identity = 49/99 (49.49%), Postives = 63/99 (63.64%), Query Frame = 2 Query: 185 CFQVKVNPSGALSSLVYMCKAIASWHVCCQHFLKCQSDLRFL*YNFFC*HV*EIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV 481 C VKVNPSG +SSLV++C+AIASWH EIRSED+ EV QVL+GYK ML N +W +C+SAL+PP+KE+L++YQV Sbjct: 823 CAVVKVNPSGGVSSLVFICQAIASWH--------------------------EIRSEDVQTEVSQVLNGYKHMLGN-SWAECLSALDPPVKERLARYQV 894
BLAST of GT626719 vs. TrEMBL
Match: Q8H0U4_ARATH (At2g16950 OS=Arabidopsis thaliana GN=At2g16950 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.110e-17 Identity = 49/99 (49.49%), Postives = 63/99 (63.64%), Query Frame = 2 Query: 185 CFQVKVNPSGALSSLVYMCKAIASWHVCCQHFLKCQSDLRFL*YNFFC*HV*EIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV 481 C VKVNPSG +SSLV++C+AIASWH EIRSED+ EV QVL+GYK ML N +W +C+SAL+PP+KE+L++YQV Sbjct: 820 CAVVKVNPSGGVSSLVFICQAIASWH--------------------------EIRSEDVQTEVSQVLNGYKHMLGN-SWAECLSALDPPVKERLARYQV 891
BLAST of GT626719 vs. TrEMBL
Match: Q8H0P3_ORYSA (Transportin (Fragment) OS=Oryza sativa GN=trn1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.333e-16 Identity = 54/159 (33.96%), Postives = 75/159 (47.17%), Query Frame = 2 Query: 38 KSNSTLQTNLQGGGCLSLRGLCAMVGSPFNTNNSILVDHSCNQCFTISD-----------CFQVKVNPSGALSSLVYMCKAIASWHVCCQHFLKCQSDLRFL*YNFFC*HV*EIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV 481 KS L +L ++L LC + + + CN I D C V NP+GA+ SL ++C+A ASW+ EI+SE LHNEVCQ+L+GYKQML +G W+QCMS LEP + ++L +Y V Sbjct: 247 KSPEGLNKSLLENSAITLGRLCWVCPDIVAPHMDHFMQAWCNALCMIRDDFEKEDAFHGLCAMVAANPTGAVGSLTFICQACASWN--------------------------EIKSEGLHNEVCQILNGYKQMLGSGGWEQCMSTLEPAVVQRLGRYGV 379
BLAST of GT626719 vs. TrEMBL
Match: B9FDR3_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_16737 PE=4 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.333e-16 Identity = 54/159 (33.96%), Postives = 75/159 (47.17%), Query Frame = 2 Query: 38 KSNSTLQTNLQGGGCLSLRGLCAMVGSPFNTNNSILVDHSCNQCFTISD-----------CFQVKVNPSGALSSLVYMCKAIASWHVCCQHFLKCQSDLRFL*YNFFC*HV*EIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV 481 KS L +L ++L LC + + + CN I D C V NP+GA+ SL ++C+A ASW+ EI+SE LHNEVCQ+L+GYKQML +G W+QCMS LEP + ++L +Y V Sbjct: 717 KSPEGLNKSLLENSAITLGRLCWVCPDIVAPHMDHFMQAWCNALCMIRDDFEKEDAFHGLCAMVAANPTGAVGSLTFICQACASWN--------------------------EIKSEGLHNEVCQILNGYKQMLGSGGWEQCMSTLEPAVVQRLGRYGV 849
BLAST of GT626719 vs. TAIR peptide
Match: AT2G16950.2 (| Symbols: TRN1, ATTRN1 | transportin 1 | chr2:7353939-7360637 FORWARD LENGTH=891) HSP 1 Score: 93.2041 bits (230), Expect = 1.431e-19 Identity = 49/99 (49.49%), Postives = 63/99 (63.64%), Query Frame = 2 Query: 185 CFQVKVNPSGALSSLVYMCKAIASWHVCCQHFLKCQSDLRFL*YNFFC*HV*EIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV 481 C VKVNPSG +SSLV++C+AIASWH EIRSED+ EV QVL+GYK ML N +W +C+SAL+PP+KE+L++YQV Sbjct: 820 CAVVKVNPSGGVSSLVFICQAIASWH--------------------------EIRSEDVQTEVSQVLNGYKHMLGN-SWAECLSALDPPVKERLARYQV 891
BLAST of GT626719 vs. TAIR peptide
Match: AT2G16950.1 (| Symbols: TRN1, ATTRN1 | transportin 1 | chr2:7353939-7360637 FORWARD LENGTH=895) HSP 1 Score: 93.2041 bits (230), Expect = 1.431e-19 Identity = 49/99 (49.49%), Postives = 63/99 (63.64%), Query Frame = 2 Query: 185 CFQVKVNPSGALSSLVYMCKAIASWHVCCQHFLKCQSDLRFL*YNFFC*HV*EIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV 481 C VKVNPSG +SSLV++C+AIASWH EIRSED+ EV QVL+GYK ML N +W +C+SAL+PP+KE+L++YQV Sbjct: 824 CAVVKVNPSGGVSSLVFICQAIASWH--------------------------EIRSEDVQTEVSQVLNGYKHMLGN-SWAECLSALDPPVKERLARYQV 895
BLAST of GT626719 vs. TAIR peptide
Match: AT2G16960.2 (| Symbols: | ARM repeat superfamily protein | chr2:7364683-7368963 FORWARD LENGTH=505) HSP 1 Score: 60.077 bits (144), Expect = 1.343e-9 Identity = 34/100 (34.00%), Postives = 53/100 (53.00%), Query Frame = 2 Query: 185 CFQVKVNPSGALSSLVYMCKAIASWHVCCQHFLKCQSDLRFL*YNFFC*HV*EIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKL-SKYQV 481 C VKVNPS +SS+ ++C AIASW ++ ++ + +E +VL GYK ML +W++C+S L+P KE+L ++YQV Sbjct: 432 CEMVKVNPSRYVSSVAFICLAIASWK--------------------------DMENKVIQSEFSKVLIGYKNMLGKNSWEECLSVLDPLAKERLAARYQV 505
BLAST of GT626719 vs. TAIR peptide
Match: AT2G16960.1 (| Symbols: | ARM repeat superfamily protein | chr2:7364683-7368963 FORWARD LENGTH=547) HSP 1 Score: 60.077 bits (144), Expect = 1.343e-9 Identity = 34/100 (34.00%), Postives = 53/100 (53.00%), Query Frame = 2 Query: 185 CFQVKVNPSGALSSLVYMCKAIASWHVCCQHFLKCQSDLRFL*YNFFC*HV*EIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKL-SKYQV 481 C VKVNPS +SS+ ++C AIASW ++ ++ + +E +VL GYK ML +W++C+S L+P KE+L ++YQV Sbjct: 474 CEMVKVNPSRYVSSVAFICLAIASWK--------------------------DMENKVIQSEFSKVLIGYKNMLGKNSWEECLSVLDPLAKERLAARYQV 547 The following BLAST results are available for this feature:
BLAST of GT626719 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT626719 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT626719 ID=GT626719; Name=GT626719; organism=Lens culinaris; type=EST; length=692bpback to top |