GT627020

EST Overview
NameGT627020
Unique NameGT627020
TypeEST
OrganismLens culinaris (lentil)
Sequence length743
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT627020 vs. TrEMBL
Match: A1YL93_GOSHI (Proline-rich protein (Fragment) OS=Gossypium hirsutum GN=PRP4 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.754e-21
Identity = 58/107 (54.21%), Postives = 59/107 (55.14%), Query Frame = 3
Query:    6 RASNSNGGPMPPAKAGRLTNAYVSSFPAAPTFVRSPSHGQXXXXXXXXXXXXHMYG----XXXXXXXXXXXXXXXXXXXXXTPPMNYPAYGGYGNVLAPTYQQAYYR 314
            R   +NGGPMPPAKAGRLTNAYVSSFPA P FVRSPSH Q             MYG                           PMNYPAYGGYGN LAP YQQAYYR
Sbjct:  131 RTRVNNGGPMPPAKAGRLTNAYVSSFPAPPPFVRSPSHTQYPAPVPGYPSPPPMYGSRSPPTNPYAYSPEAVPPPLAGSYPGAPMNYPAYGGYGNGLAPAYQQAYYR 237          
BLAST of GT627020 vs. TrEMBL
Match: B9RTR7_RICCO (Protein FRIGIDA, putative OS=Ricinus communis GN=RCOM_0912030 PE=4 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.209e-21
Identity = 56/105 (53.33%), Postives = 59/105 (56.19%), Query Frame = 3
Query:    6 RASNSNGGPMPPAKAGRLTNAYVSSFPAAPTFVRSPSHGQXXXXXXXXXXXXHMYGXXXXXXXXXXXXXXXXXXXXXTP--PMNYPAYGGYGNVLAPTYQQAYYR 314
            R   SNGGPMPPAKAGRLTNAYVSSFPA P FVRSPSH Q             +YG                      P  P++YPAYGGYGN  AP YQQAYYR
Sbjct:  416 RTRASNGGPMPPAKAGRLTNAYVSSFPAPPAFVRSPSHTQYPTALPAYPSPPAVYGTRSPPSPYAYSPEAAPPIAGSYPGAPLSYPAYGGYGNGFAPAYQQAYYR 520          
BLAST of GT627020 vs. TrEMBL
Match: C9E0S7_9ROSI (Putative uncharacterized protein OS=Dimocarpus longan PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.529e-19
Identity = 56/112 (50.00%), Postives = 58/112 (51.79%), Query Frame = 3
Query:    6 RASNSNGGPMPPAKAGRLTNAYVSSFPAAPTFVRSPSHGQXXXXXXXXXXXXHMYGXXXXXXXXXXXXXXXXXXXXXTP---------PMNYPAYGGYGNVLAPTYQQAYYR 314
            R   SNGGPMPPAKAGR TNAYVSSFPA PTFVRSPSH Q            +                         P         PMNYPAYGGYG+ LAP YQQAYYR
Sbjct:  115 RTRASNGGPMPPAKAGRSTNAYVSSFPAPPTFVRSPSHSQYPAGVSPYQSPPYQSPPAVYGSRSPQAHPYAYSPEAAPPPLAGSYPGAPMNYPAYGGYGSGLAPAYQQAYYR 226          
BLAST of GT627020 vs. TrEMBL
Match: A9PGY7_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.425e-18
Identity = 51/96 (53.12%), Postives = 53/96 (55.21%), Query Frame = 3
Query:   33 MPPAKAGRLTNAYVSSFPAAPTFVRSPSHGQXXXXXXXXXXXXHMYGXXXXXXXXXXXXXXXXXXXXXTP--PMNYPAYGGYGNVLAPTYQQAYYR 314
            MPPAKAGRLTNAYVSSFPA P FVRSPSH Q             +YG                      P  P+NYPAYGGYGN  AP YQQAYYR
Sbjct:    1 MPPAKAGRLTNAYVSSFPAPPAFVRSPSHTQYPTGVPAYPSPPAVYGSRSPPSPYAYSPEAAAPIAGSYPVAPLNYPAYGGYGNGFAPAYQQAYYR 96          
BLAST of GT627020 vs. TrEMBL
Match: A5B745_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022061 PE=4 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.985e-15
Identity = 50/104 (48.08%), Postives = 55/104 (52.88%), Query Frame = 3
Query:    6 RASNSNGGPMPPAKAGRLTNAYVSSFPAAPTFVRSPSHGQ----XXXXXXXXXXXXHMYGXXXXXXXXXXXXXXXXXXXXXT---PPMNYPAYGGYGNVLAPTY 296
            R   SNGGPMPPAKAGRLTNAYVSSFPAAPTF+RSPSH Q                 MYG                     +    P+NYPAYGGYGN L  ++
Sbjct:  414 RTRASNGGPMPPAKAGRLTNAYVSSFPAAPTFIRSPSHTQYPAAVPAYPYDRPAAPAMYGSRSPPANPYAYSPEAAPPLAGSYPGAPINYPAYGGYGNGLEASF 517          
BLAST of GT627020 vs. TrEMBL
Match: B9HJY2_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_419249 PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.481e-14
Identity = 46/91 (50.55%), Postives = 48/91 (52.75%), Query Frame = 3
Query:    6 RASNSNGGPMPPAKAGRLTNAYVSSFPAAPTFVRSPSHGQXXXXXXXXXXXXHMYGXXXXXXXXXXXXXXXXXXXXXTP--PMNYPAYGGY 272
            R   SNGGPMPPAKAGRLTNAYVSSFPA P FVRSPSH Q             +YG                      P  P+NYPAYGGY
Sbjct:  417 RTRASNGGPMPPAKAGRLTNAYVSSFPAPPAFVRSPSHTQYPTGVPAYPSPPAVYGSRSPPSPYAYSPEAAAPIAGSYPVAPLNYPAYGGY 507          
BLAST of GT627020 vs. TrEMBL
Match: Q6ZA60_ORYSJ (Putative hydroxyproline-rich glycoprotein OS=Oryza sativa subsp. japonica GN=P0496D04.37-1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.936e-11
Identity = 51/122 (41.80%), Postives = 56/122 (45.90%), Query Frame = 3
Query:    6 RASNSNGGPMPPAKAGRLT-NAYVSSFPAAPTFVRSPSHGQXXXXXXXXXXXXHMYGXXXXXXXXXXXXXXXXXXXXXT----------PPMNYP-AYGG-------YGNVLAPTYQQAYYR 314
            R   SNGGPMPPAKAGRLT NA VSS PAA TFVRSPSH                +G                     T          PP++YP AYGG       Y N +AP + QAYYR
Sbjct:  413 RIRASNGGPMPPAKAGRLTNNACVSSTPAATTFVRSPSHTSYAMASPYPYDRPVGHGLYCNQSPPAIREPYVYPAKEVTNFAPGLPYSSPPISYPHAYGGYNNGMGAYNNGMAPAFHQAYYR 534          
BLAST of GT627020 vs. TrEMBL
Match: B9FVR5_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_23273 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.936e-11
Identity = 51/122 (41.80%), Postives = 56/122 (45.90%), Query Frame = 3
Query:    6 RASNSNGGPMPPAKAGRLT-NAYVSSFPAAPTFVRSPSHGQXXXXXXXXXXXXHMYGXXXXXXXXXXXXXXXXXXXXXT----------PPMNYP-AYGG-------YGNVLAPTYQQAYYR 314
            R   SNGGPMPPAKAGRLT NA VSS PAA TFVRSPSH                +G                     T          PP++YP AYGG       Y N +AP + QAYYR
Sbjct:  563 RIRASNGGPMPPAKAGRLTNNACVSSTPAATTFVRSPSHTSYAMASPYPYDRPVGHGLYCNQSPPAIREPYVYPAKEVTNFAPGLPYSSPPISYPHAYGGYNNGMGAYNNGMAPAFHQAYYR 684          
BLAST of GT627020 vs. TrEMBL
Match: B8B7N5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25073 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.936e-11
Identity = 51/122 (41.80%), Postives = 56/122 (45.90%), Query Frame = 3
Query:    6 RASNSNGGPMPPAKAGRLT-NAYVSSFPAAPTFVRSPSHGQXXXXXXXXXXXXHMYGXXXXXXXXXXXXXXXXXXXXXT----------PPMNYP-AYGG-------YGNVLAPTYQQAYYR 314
            R   SNGGPMPPAKAGRLT NA VSS PAA TFVRSPSH                +G                     T          PP++YP AYGG       Y N +AP + QAYYR
Sbjct:  413 RIRASNGGPMPPAKAGRLTNNACVSSTPAATTFVRSPSHTSYAMASPYPYDRPVGHGLYCNQSPPAIREPYVYPAKEVTNFAPGLPYSSPPISYPHAYGGYNNGMGAYNNGMAPAFHQAYYR 534          
BLAST of GT627020 vs. TrEMBL
Match: D7MBA5_ARALY (Hydroxyproline-rich glycoprotein family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_915342 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 2.291e-7
Identity = 29/39 (74.36%), Postives = 31/39 (79.49%), Query Frame = 3
Query:    6 RASNSNGGPMPPAKAGRLTNAYVSSF-PAAPTFVRSPSH 119
            R   S  GPMPPAKAGR+TNAYVSSF P  PTF+RSPSH
Sbjct:  418 RTRASYNGPMPPAKAGRITNAYVSSFPPPPPTFIRSPSH 456          
BLAST of GT627020 vs. TAIR peptide
Match: AT4G14900.1 (| Symbols: | FRIGIDA-like protein | chr4:8521759-8523607 REVERSE LENGTH=532)

HSP 1 Score: 58.5362 bits (140), Expect = 4.363e-9
Identity = 42/105 (40.00%), Postives = 50/105 (47.62%), Query Frame = 3
Query:    3 TRASNSNGGPMPPAKAGRLTNAYVSSF-PAAPTFVRSPSHGQXXXXXXXXXXXXHMYGXXXXXXXXXXXXXXXXXXXXXTPPMNYP-AYGGYGNVLAPTYQQAYY 311
            TRAS S  GPMPPAKAGR+TNAYVSSF P  PTF+RS SH               +Y                      T P++YP AYG Y + +A      Y+
Sbjct:  419 TRASYS--GPMPPAKAGRITNAYVSSFPPPPPTFIRSQSHSPQYGVPAYTTSPPTIYS---NRSPPYQYSPEAVHGSYQTSPVSYPTAYGTYCSPVAAPPPPVYH 518          
BLAST of GT627020 vs. TAIR peptide
Match: AT3G22440.1 (| Symbols: | FRIGIDA-like protein | chr3:7959854-7961886 FORWARD LENGTH=532)

HSP 1 Score: 56.225 bits (134), Expect = 2.165e-8
Identity = 38/96 (39.58%), Postives = 42/96 (43.75%), Query Frame = 3
Query:    6 RASNSNGGPMPPAKAGRLTNAYVSSFPAAPTFVRSPSHG-QXXXXXXXXXXXXHMYGXXXXXXXXXXXXXXXXXXXXXTPPMNYPAYGGYGNVLAP 290
            R   S  GPMPPAKAGR+TNAYVSSFP    F+RSPSH  Q             +Y                        P+ YPAY GY N   P
Sbjct:  420 RTRASYNGPMPPAKAGRITNAYVSSFP----FIRSPSHSPQYASPAAYPSPPTTVYSNRSPPYPYSPEIIPGSYQG---SPIGYPAYNGYCNGPVP 508          
The following BLAST results are available for this feature:
BLAST of GT627020 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A1YL93_GOSHI4.754e-2154.21Proline-rich protein (Fragment) OS=Gossypium hirsu... [more]
B9RTR7_RICCO6.209e-2153.33Protein FRIGIDA, putative OS=Ricinus communis GN=R... [more]
C9E0S7_9ROSI1.529e-1950.00Putative uncharacterized protein OS=Dimocarpus lon... [more]
A9PGY7_POPTR6.425e-1853.13Putative uncharacterized protein OS=Populus tricho... [more]
A5B745_VITVI2.985e-1548.08Putative uncharacterized protein OS=Vitis vinifera... [more]
B9HJY2_POPTR1.481e-1450.55Predicted protein (Fragment) OS=Populus trichocarp... [more]
Q6ZA60_ORYSJ9.936e-1141.80Putative hydroxyproline-rich glycoprotein OS=Oryza... [more]
B9FVR5_ORYSJ9.936e-1141.80Putative uncharacterized protein OS=Oryza sativa s... [more]
B8B7N5_ORYSI9.936e-1141.80Putative uncharacterized protein OS=Oryza sativa s... [more]
D7MBA5_ARALY2.291e-774.36Hydroxyproline-rich glycoprotein family protein OS... [more]
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BLAST of GT627020 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G14900.14.363e-940.00| Symbols: | FRIGIDA-like protein | chr4:8521759-... [more]
AT3G22440.12.165e-839.58| Symbols: | FRIGIDA-like protein | chr3:7959854-... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 1..19
score: NAcoord: 45..61
score
NoneNo IPR availableSEGsegsegcoord: 42..53
score: NAcoord: 58..78
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT627020 ID=GT627020; Name=GT627020; organism=Lens culinaris; type=EST; length=743bp
GAACAAGAGCAAGCAATAGCAATGGAGGCCCAATGCCACCTGCCAAAGCT
GGGCGTTTGACTAATGCATATGTATCATCTTTCCCTGCTGCTCCTACATT
TGTTAGATCTCCTTCACACGGGCAATACCCAGCTGCTCTACCACCTTATC
CTTCACCACCCCACATGTATGGCAGCAGAAGTCCATCCTATGCTTATTCA
CCAGAGCCAGCACCAGCTATTGCAGCGTCTTATCCAACACCACCCATGAA
TTATCCTGCCTATGGTGGCTATGGAAATGTTTTGGCACCCACTTATCAGC
AGGCTTACTACCGATAGAAATGACTACACTTGGAAGATGGTAACTACTGA
TATGATGACCTTGATCCCATTTACTTTCGTAATGTTGTTTGTAATCACTA
ACCGTTTAACGGTAGCAGTTCTGTGTGTTAATTATAACTACTGTCTCACT
TCTTGCTCTGCATGGGTGGGGGGAGAAGTTGTATTTCTAATGTTGATCCC
ATAGTAGCTGATTGTGGAAAGTAACTAGGACGGCCAAGAAACATCAGAAA
CTCTACTACCACTGTTCGGTTTAGTTGTAGAAAGACTTACTTTTTTACTA
TGTTTACATAATATATGCATTATCCTGGGGTCGAAGGGAAGAAAAGAAAA
GAAAAAGGTAATCTGTTTCTTGGCAGCTGTTTACTATGTTATAAACTCTA
TGAAGGAAATAATTTTATCTGTGATGAATGTATTTTACTTTGA
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