GT620257
EST Overview
Unigenes
This EST is part of the following unigenes:
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT620257 vs. TrEMBL
Match: B9T6B0_RICCO (Monoglyceride lipase, putative OS=Ricinus communis GN=RCOM_0208950 PE=4 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.625e-22 Identity = 68/145 (46.90%), Postives = 85/145 (58.62%), Query Frame = 2 Query: 83 SALLSIRALKSLFMLVSAFVMVLFLPFRGRRRVLSPVEKEEKNQNH--------ECCHHHRKGAV-VRVPAKIVPWKSXXXXXXXXXXXFDYLM-------RRELAIKRVLEDGDEKCMREYWLFGTKRGDTIFTQCWTPVSVEI 469 +AL S+RALKSL ML++A V++L LPFRGRRR + P EK N ++ +C RKG+ VRVP IVPWKS ++ RR LAI+RV +D D C R++ LF T RGDTIFTQ W PVSV I Sbjct: 73 NALFSVRALKSLLMLINAVVLLLLLPFRGRRRTV-PAEKAINNNSNNNNNKDFEDCGGALRKGSTKVRVPTTIVPWKSSASSVGGGGGGSSVVVVDQEVAARRALAIRRVTQDDDPNCDRDFSLFVTARGDTIFTQLWAPVSVNI 216
BLAST of GT620257 vs. TrEMBL
Match: B9I4U5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_661356 PE=4 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.196e-19 Identity = 60/142 (42.25%), Postives = 82/142 (57.75%), Query Frame = 2 Query: 83 SALLSIRALKSLFMLVSAFVMVLFLPFRGRRRVL--------SPVEKEEKNQNHECCHHHRKGA---VVRVPAKIVPWKSXXXXXXXXXXXFDYLM-RRELAIKRVLEDGDEKCMREYWLFGTKRGDTIFTQCWTPVSVEIR 472 +AL S++ALKSL ML++AF ++L PFRGRRR++ S ++K+++ G +RVPA IVPWKS + RR +AIKRVL+D D +RE+ LF T R D +FTQ WTPVS +IR Sbjct: 24 TALFSVQALKSLLMLINAFFLILLAPFRGRRRMVVVAARGSSSSSSGDQKSKDDRLLQETSSGVHRTKLRVPATIVPWKSAGGGGRVTAVVDPEVGGRRAIAIKRVLQDDDTNTVREFSLFVTARSDNLFTQSWTPVSAKIR 165
BLAST of GT620257 vs. TrEMBL
Match: B9N395_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1114525 PE=4 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.423e-18 Identity = 57/129 (44.19%), Postives = 76/129 (58.91%), Query Frame = 2 Query: 86 ALLSIRALKSLFMLVSAFVMVLFLPFRGRRRVLSPVEKEEKNQNHECCHHHRKGAVVRVPAKIVPWKSXXXXXXXXXXXFDYLMRRELAIKRVLEDGDEKCMREYWLFGTKRGDTIFTQCWTPVSVEIR 472 AL S++ALKSL +L++AF ++L +PFRGRRR + E H K +RVPA +VPWKS + RR +AIKR L++ D +RE+ LF + R DTIFTQ WT VSV+IR Sbjct: 27 ALFSVQALKSLLVLINAFFLLLLVPFRGRRRT-------DDRLLQESGVHRTK---LRVPATVVPWKSAGGSGVTAVVDSEVGGRRAIAIKRALQEDDPNTIREFSLFVSARSDTIFTQSWTSVSVKIR 145
BLAST of GT620257 vs. TrEMBL
Match: D7U697_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_133.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000399001 PE=4 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.428e-18 Identity = 62/133 (46.62%), Postives = 81/133 (60.90%), Query Frame = 2 Query: 83 SALLSIRALKSLFMLVSAFVMVLFLPFRGRRRVLSPVEKEEKNQNHECCHHH-RKGAVVRVPAKIVPWKSXXXXXXXXXXXFDYLMRRELAIKRVLEDGD--EKCMREYWLFGTKRGDTIFTQCWTPVSVEIR 472 SA+LS+RAL+SL +LV A V++L +PFRGRR + K+ HE H RK VVRVPA VPW+ D RR LAI RV+++G EK +RE+ L T RGDT+FTQ WTP+ V++R Sbjct: 11 SAVLSVRALRSLVVLVRALVLLLLVPFRGRRGSVD----RPKDDKHEVTHASIRKVPVVRVPAT-VPWRCGAAVAVDQ----DVAARRALAIGRVVQEGGGGEKSVREFSLLTTLRGDTLFTQSWTPLRVKLR 134
BLAST of GT620257 vs. TrEMBL
Match: D7U696_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_133.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000397001 PE=4 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.579e-17 Identity = 62/153 (40.52%), Postives = 86/153 (56.21%), Query Frame = 2 Query: 26 RVIESDRRKMATEAYMLKESALLSIRALKSLFMLVSAFVMVLFLPFRGRRRVLSPVEKEEKNQNHECCHHHRKGAVVRVPAKIVPWKSXXXXXXXXXXXFDYLMRRELAIKRVLED----GDEKCMREYWLFGTKRGDTIFTQCWTPVSVEIR 472 +V ++ M T + +ALLS+RAL+SL +LV A V++L +PFRGRR V++ + + RK VVRVPA V W+ D RR LAI RV+++ G EK +RE+ L T RGDT+FTQ WTP+ V+IR Sbjct: 3 KVTDASASIMLTSGASGRINALLSVRALRSLVVLVKALVLLLLVPFRGRR---GSVDRPKDEKQEVAPASVRKAPVVRVPA-TVTWRCGAAAVDQ-----DVAARRALAIGRVVQESGGGGGEKSVREFSLLVTIRGDTLFTQSWTPLRVKIR 146
BLAST of GT620257 vs. TrEMBL
Match: Q9FX41_ARATH (Lysophospholipase homolog, putative OS=Arabidopsis thaliana GN=T9L24.33 PE=4 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.421e-10 Identity = 50/137 (36.50%), Postives = 70/137 (51.09%), Query Frame = 2 Query: 89 LLSIRALKSLFMLVSAFVMVLFLPFR---GRRRVLSPVEKEEKNQNHECCHHHRKGAVVRVPAKIVPWKSXXXXXXXXXXXF--------DYLMRRELAIKRVLED--GDEKCMREYWLFGTKRGDTIFTQCWTPVS 460 L S+R LK L ++ + ++ L LPFR RRR + V +++K + V P +IV K + +RRELAIKRVLED GD +R+Y LF TKRGDT+F+Q W+P+S Sbjct: 28 LFSMRELKRLVTIIQSLILFLLLPFRVVVWRRRTGAVVIRDDKQERK-----------VWSPPQIVVRKRNIGGESSVSPPSVPAAVVDGEVAVRRELAIKRVLEDEGGDGSSVRDYSLFTTKRGDTLFSQSWSPLS 153
BLAST of GT620257 vs. TrEMBL
Match: Q94AM5_ARATH (Putative lysophospholipase homolog OS=Arabidopsis thaliana GN=At1g73480 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.421e-10 Identity = 50/137 (36.50%), Postives = 70/137 (51.09%), Query Frame = 2 Query: 89 LLSIRALKSLFMLVSAFVMVLFLPFR---GRRRVLSPVEKEEKNQNHECCHHHRKGAVVRVPAKIVPWKSXXXXXXXXXXXF--------DYLMRRELAIKRVLED--GDEKCMREYWLFGTKRGDTIFTQCWTPVS 460 L S+R LK L ++ + ++ L LPFR RRR + V +++K + V P +IV K + +RRELAIKRVLED GD +R+Y LF TKRGDT+F+Q W+P+S Sbjct: 82 LFSMRELKRLVTIIQSLILFLLLPFRVVVWRRRTGAVVIRDDKQERK-----------VWSPPQIVVRKRNIGGESSVSPPSVPAAVVDGEVAVRRELAIKRVLEDEGGDGSSVRDYSLFTTKRGDTLFSQSWSPLS 207
BLAST of GT620257 vs. TrEMBL
Match: Q0WLV4_ARATH (Lysophospholipase like protein OS=Arabidopsis thaliana GN=At1g73480 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.421e-10 Identity = 50/137 (36.50%), Postives = 70/137 (51.09%), Query Frame = 2 Query: 89 LLSIRALKSLFMLVSAFVMVLFLPFR---GRRRVLSPVEKEEKNQNHECCHHHRKGAVVRVPAKIVPWKSXXXXXXXXXXXF--------DYLMRRELAIKRVLED--GDEKCMREYWLFGTKRGDTIFTQCWTPVS 460 L S+R LK L ++ + ++ L LPFR RRR + V +++K + V P +IV K + +RRELAIKRVLED GD +R+Y LF TKRGDT+F+Q W+P+S Sbjct: 82 LFSMRELKRLVTIIQSLILFLLLPFRVVVWRRRTGAVVIRDDKQERK-----------VWSPPQIVVRKRNIGGESSVSPPSVPAAVVDGEVAVRRELAIKRVLEDEGGDGSSVRDYSLFTTKRGDTLFSQSWSPLS 207
BLAST of GT620257 vs. TrEMBL
Match: D7KRI7_ARALY (Hydrolase, alpha/beta fold family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_895207 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 7.081e-10 Identity = 51/139 (36.69%), Postives = 69/139 (49.64%), Query Frame = 2 Query: 89 LLSIRALKSLFMLVSAFVMVLFLPFR---GRRRVLSPVEKEEKNQNHECCHHHRKGAVVRVPAKIVPWKSXXXXXXXXXXX----------FDYLMRRELAIKRVLED--GDEKCMREYWLFGTKRGDTIFTQCWTPVS 460 L S+R LK L + + ++ L LPFR RRR + V +++K + V P +IV K + +RRELAIKRVLED GD +R+Y LF TKRGDT+FTQ W+P+S Sbjct: 82 LFSMRELKRLVTFIQSLILFLLLPFRVVVWRRRTGAVVIRDDKQERK-----------VWSPPQIVVRKRNIGGESGCSVSPPSVPAAVVDEEVAVRRELAIKRVLEDEGGDGSSVRDYSLFTTKRGDTLFTQSWSPLS 209
BLAST of GT620257 vs. TAIR peptide
Match: AT1G73480.1 (| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:27629266-27632486 FORWARD LENGTH=463) HSP 1 Score: 68.9366 bits (167), Expect = 3.510e-12 Identity = 50/137 (36.50%), Postives = 70/137 (51.09%), Query Frame = 2 Query: 89 LLSIRALKSLFMLVSAFVMVLFLPFR---GRRRVLSPVEKEEKNQNHECCHHHRKGAVVRVPAKIVPWKSXXXXXXXXXXXF--------DYLMRRELAIKRVLED--GDEKCMREYWLFGTKRGDTIFTQCWTPVS 460 L S+R LK L ++ + ++ L LPFR RRR + V +++K + V P +IV K + +RRELAIKRVLED GD +R+Y LF TKRGDT+F+Q W+P+S Sbjct: 82 LFSMRELKRLVTIIQSLILFLLLPFRVVVWRRRTGAVVIRDDKQERK-----------VWSPPQIVVRKRNIGGESSVSPPSVPAAVVDGEVAVRRELAIKRVLEDEGGDGSSVRDYSLFTTKRGDTLFSQSWSPLS 207
BLAST of GT620257 vs. TAIR peptide
Match: AT1G18360.1 (| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:6316996-6319204 REVERSE LENGTH=382) HSP 1 Score: 56.6102 bits (135), Expect = 1.803e-8 Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 2 Query: 335 MRRELAIKRVLED--GDEKCMREYWLFGTKRGDTIFTQCWTPV 457 +RR+LA++RVLED GD +R++ LF TKRGDT+FTQ WTPV Sbjct: 82 IRRKLAMRRVLEDNGGDGSSVRDFSLFTTKRGDTLFTQSWTPV 124 The following BLAST results are available for this feature:
BLAST of GT620257 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 9
BLAST of GT620257 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT620257 ID=GT620257; Name=GT620257; organism=Lens culinaris; type=EST; length=783bpback to top |