GT623083

EST Overview


Name	GT623083
Unique Name	GT623083
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	576

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
KEGG analysis for Lens culinaris unigene v1	2011-01-05
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT623083 vs. TrEMBL
Match: B7FGL1_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.527e-58
Identity = 108/117 (92.31%), Postives = 113/117 (96.58%), Query Frame = 2

Query:    2 SGEGLSLMFYRWATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEPKEGHVLHPVYADASASEPQLAV 352
            SGEGLSL+F RWATKKTAGSTKNGRDSKPKNLGVKK+GGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEG VKFERNKLTGRKWVHVEPKEGHVLHPV+AD SASEP++ V
Sbjct:   30 SGEGLSLVFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGWVKFERNKLTGRKWVHVEPKEGHVLHPVFADVSASEPKVGV 146

[Close]

BLAST of GT623083 vs. TrEMBL
Match: C6TCI4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 4.767e-55
Identity = 106/118 (89.83%), Postives = 112/118 (94.92%), Query Frame = 2

Query:    2 SGEGLSLMFYRWATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEPKEGHVLHPVY-ADASASEPQLAV 352
            SGEGLS  F RWA+KKTAGSTKNGRDSKPKNLGVKK+GGERVIPGNIIVRQRGTRFHPGNYVGLGKDH+LFALKEG VKFERNKLTGRKWVHVEPKEGHVLHP+Y ADASASE ++AV
Sbjct:   30 SGEGLSFTFRRWASKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHSLFALKEGWVKFERNKLTGRKWVHVEPKEGHVLHPLYAADASASELKVAV 147

[Close]

BLAST of GT623083 vs. TrEMBL
Match: C6TNN3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.174e-53
Identity = 103/118 (87.29%), Postives = 111/118 (94.07%), Query Frame = 2

Query:    2 SGEGLSLMFYRWATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEPKEGHVLHPVY-ADASASEPQLAV 352
            SGEGL+L F RWA+KKTAGSTKNGRDSKPKNLGVKK+GGERVIPGNIIVRQRGTRFHPGNYVGLGKD +LFALKEG VKFERNKLTGRKWVH+EPKEGHVLHP+Y AD SASE ++AV
Sbjct:   30 SGEGLNLAFRRWASKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGLGKDRSLFALKEGWVKFERNKLTGRKWVHIEPKEGHVLHPLYAADGSASELKVAV 147

[Close]

BLAST of GT623083 vs. TrEMBL
Match: D7TQ18_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_63.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031969001 PE=4 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.462e-53
Identity = 97/110 (88.18%), Postives = 107/110 (97.27%), Query Frame = 2

Query:    2 SGEGLSLMFYRWATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEPKEGHVLHPVYADASA 331
            SGEGL L+F RWA+KKTAGSTKNGRDSKPKNLGVKK+GGERVIPGNIIVRQRGTRFHPGNYVG+GKDHTL+ALKEG VKFE++KL+GRKWVHVEPK+GHVLHPVYADA+A
Sbjct:   20 SGEGLGLIFMRWASKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLYALKEGCVKFEKHKLSGRKWVHVEPKDGHVLHPVYADAAA 129

[Close]

BLAST of GT623083 vs. TrEMBL
Match: B9R7U5_RICCO (Ribosomal protein L27, putative OS=Ricinus communis GN=RCOM_1594370 PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 9.304e-51
Identity = 94/117 (80.34%), Postives = 106/117 (90.60%), Query Frame = 2

Query:    2 SGEGLSLMFYRWATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEPKEGHVLHPVYADASASEPQLAV 352
            S  GLSLMF RWATK+TAGSTKNGRDSKPKNLGVKK+GGERVIPGNIIVRQRGTRFHPGNYVG+GKDHTL+ALKEG VKFE +KL+GRKWVHVEPK+G+ LHPVYA A+++   L +
Sbjct:   34 SAGGLSLMFRRWATKRTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGMGKDHTLYALKEGNVKFETHKLSGRKWVHVEPKDGYELHPVYAQANSASTHLKI 150

[Close]

BLAST of GT623083 vs. TrEMBL
Match: Q9LXF9_ARATH (Ribosomal protein L27-like OS=Arabidopsis thaliana GN=F8M21_110 PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.645e-48
Identity = 88/117 (75.21%), Postives = 104/117 (88.89%), Query Frame = 2

Query:    2 SGEGLSLMFYRWATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEPKEGHVLHPVYADASASEPQLAV 352
            S  GLSL+F RWATKKTAGSTKNGRDS PK LGVKK+GGE VIPGNIIVRQRGTRFHPG+YVG+GKDHTLFALKEG+V+FE++K+TGRKW+HV+P  GHVLHP+Y  A+A++   A+
Sbjct:   35 SSSGLSLVFKRWATKKTAGSTKNGRDSNPKFLGVKKFGGESVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEKSKITGRKWIHVDPTGGHVLHPIYTKAAAAQSTKAL 151

[Close]

BLAST of GT623083 vs. TrEMBL
Match: D2YZ62_9ORYZ (Mitochondrial ribosomal protein L27 OS=Oryza glumipatula GN=mtRPL27a PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.645e-48
Identity = 91/115 (79.13%), Postives = 99/115 (86.09%), Query Frame = 2

Query:    2 SGEGLSLMFYRWATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEPKEGHVLHPVYADASASEPQL 346
            S  GLSL+F RWATKKTAGSTKNGRDS PK LGVKK+GGE+V PGNIIVRQRGTRFHPGNYVG+GKDHTLF LKEG V+FERNKLTGRKWVHV+P  GHVLHPVYA  S    ++
Sbjct:   28 SSGGLSLIFKRWATKKTAGSTKNGRDSNPKYLGVKKFGGEKVEPGNIIVRQRGTRFHPGNYVGMGKDHTLFCLKEGHVRFERNKLTGRKWVHVDPVAGHVLHPVYASDSTPAAEM 142

[Close]

BLAST of GT623083 vs. TrEMBL
Match: Q94AC6_ARATH (AT5g15220/F8M21_110 OS=Arabidopsis thaliana GN=At5g15220 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.372e-48
Identity = 87/112 (77.68%), Postives = 102/112 (91.07%), Query Frame = 2

Query:    2 SGEGLSLMFYRWATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEPKEGHVLHPVYADASASE 337
            S  GLSL+F RWATKKTAGSTKNGRDS PK LGVKK+GGE VIPGNIIVRQRGTRFHPG+YVG+GKDHTLFALKEG+V+FE++K+TGRKW+HV+P  GHVLHP+Y  A+A++
Sbjct:   35 SSSGLSLVFKRWATKKTAGSTKNGRDSNPKFLGVKKFGGESVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEKSKITGRKWIHVDPTGGHVLHPIYTKAAAAQ 146

[Close]

BLAST of GT623083 vs. TrEMBL
Match: Q6ZKP0_ORYSJ (Mitochondrial ribosomal protein L27 OS=Oryza sativa subsp. japonica GN=OJ1118_A03.21 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.372e-48
Identity = 90/115 (78.26%), Postives = 99/115 (86.09%), Query Frame = 2

Query:    2 SGEGLSLMFYRWATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEPKEGHVLHPVYADASASEPQL 346
            S  GLSL+F RWATKKTAGSTKNGRDS PK LGVKK+GGE+V PGNII+RQRGTRFHPGNYVG+GKDHTLF LKEG V+FERNKLTGRKWVHV+P  GHVLHPVYA  S    ++
Sbjct:   28 SSGGLSLIFKRWATKKTAGSTKNGRDSNPKYLGVKKFGGEKVEPGNIIIRQRGTRFHPGNYVGMGKDHTLFCLKEGHVRFERNKLTGRKWVHVDPVAGHVLHPVYASDSTPAAEM 142

[Close]

BLAST of GT623083 vs. TrEMBL
Match: A2YV25_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29176 PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.372e-48
Identity = 90/115 (78.26%), Postives = 99/115 (86.09%), Query Frame = 2

Query:    2 SGEGLSLMFYRWATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEPKEGHVLHPVYADASASEPQL 346
            S  GLSL+F RWATKKTAGSTKNGRDS PK LGVKK+GGE+V PGNII+RQRGTRFHPGNYVG+GKDHTLF LKEG V+FERNKLTGRKWVHV+P  GHVLHPVYA  S    ++
Sbjct:   28 SSGGLSLIFKRWATKKTAGSTKNGRDSNPKYLGVKKFGGEKVEPGNIIIRQRGTRFHPGNYVGMGKDHTLFCLKEGHVRFERNKLTGRKWVHVDPVAGHVLHPVYASDSTPAAEM 142

[Close]

BLAST of GT623083 vs. SwissProt
Match: RL27_VIBPA (50S ribosomal protein L27 OS=Vibrio parahaemolyticus GN=rpmA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.410e-25
Identity = 56/82 (68.29%), Postives = 65/82 (79.27%), Query Frame = 2

Query:   38 ATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVE 283
            A KK  GST+NGRDS+ K LGVK++GGE V+ GNIIVRQRGT+FH GN VG+GKDHTLFAL EGKVKFE      RK+V +E
Sbjct:    2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGNNVGIGKDHTLFALTEGKVKFEVKGPKNRKFVSIE 83

[Close]

BLAST of GT623083 vs. SwissProt
Match: RL27_VIBHB (50S ribosomal protein L27 OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=rpmA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.410e-25
Identity = 56/82 (68.29%), Postives = 65/82 (79.27%), Query Frame = 2

Query:   38 ATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVE 283
            A KK  GST+NGRDS+ K LGVK++GGE V+ GNIIVRQRGT+FH GN VG+GKDHTLFAL EGKVKFE      RK+V +E
Sbjct:    2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGNNVGIGKDHTLFALTEGKVKFEVKGPKNRKFVSIE 83

[Close]

BLAST of GT623083 vs. SwissProt
Match: RL27_VIBVY (50S ribosomal protein L27 OS=Vibrio vulnificus (strain YJ016) GN=rpmA PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.405e-25
Identity = 56/82 (68.29%), Postives = 65/82 (79.27%), Query Frame = 2

Query:   38 ATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVE 283
            A KK  GST+NGRDS+ K LGVK++GGE V+ GNIIVRQRGT+FH GN VGLGKDHTLFAL +GKVKFE      RK+V +E
Sbjct:    2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTQFHAGNNVGLGKDHTLFALTDGKVKFEVKGPKNRKFVSIE 83

[Close]

BLAST of GT623083 vs. SwissProt
Match: RL27_VIBVU (50S ribosomal protein L27 OS=Vibrio vulnificus GN=rpmA PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.405e-25
Identity = 56/82 (68.29%), Postives = 65/82 (79.27%), Query Frame = 2

Query:   38 ATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVE 283
            A KK  GST+NGRDS+ K LGVK++GGE V+ GNIIVRQRGT+FH GN VGLGKDHTLFAL +GKVKFE      RK+V +E
Sbjct:    2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTQFHAGNNVGLGKDHTLFALTDGKVKFEVKGPKNRKFVSIE 83

[Close]

BLAST of GT623083 vs. SwissProt
Match: RL27_VIBCM (50S ribosomal protein L27 OS=Vibrio cholerae serotype O1 (strain M66-2) GN=rpmA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.103e-25
Identity = 55/85 (64.71%), Postives = 65/85 (76.47%), Query Frame = 2

Query:   38 ATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEPKE 292
            A KK  GST+NGRDS+ K LGVK++GGE V+ GNIIVRQRGT+FH G  VG+GKDHTLFAL +GKVKFE      RK+V +E  E
Sbjct:    2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLFALSDGKVKFEVKGPNNRKFVSIETAE 86

[Close]

BLAST of GT623083 vs. SwissProt
Match: RL27_VIBCH (50S ribosomal protein L27 OS=Vibrio cholerae GN=rpmA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.103e-25
Identity = 55/85 (64.71%), Postives = 65/85 (76.47%), Query Frame = 2

Query:   38 ATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEPKE 292
            A KK  GST+NGRDS+ K LGVK++GGE V+ GNIIVRQRGT+FH G  VG+GKDHTLFAL +GKVKFE      RK+V +E  E
Sbjct:    2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLFALSDGKVKFEVKGPNNRKFVSIETAE 86

[Close]

BLAST of GT623083 vs. SwissProt
Match: RL27_VIBC3 (50S ribosomal protein L27 OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=rpmA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.103e-25
Identity = 55/85 (64.71%), Postives = 65/85 (76.47%), Query Frame = 2

Query:   38 ATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEPKE 292
            A KK  GST+NGRDS+ K LGVK++GGE V+ GNIIVRQRGT+FH G  VG+GKDHTLFAL +GKVKFE      RK+V +E  E
Sbjct:    2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLFALSDGKVKFEVKGPNNRKFVSIETAE 86

[Close]

BLAST of GT623083 vs. SwissProt
Match: RL27_VIBFM (50S ribosomal protein L27 OS=Vibrio fischeri (strain MJ11) GN=rpmA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.358e-25
Identity = 55/82 (67.07%), Postives = 64/82 (78.05%), Query Frame = 2

Query:   38 ATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVE 283
            A KK  GST+NGRDS+ K LGVK++GGE V+ GNIIVRQRGT+FH G  VG+GKDHTLFAL EGKVKFE      RK+V +E
Sbjct:    2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLFALSEGKVKFEVKGPKNRKFVSIE 83

[Close]

BLAST of GT623083 vs. SwissProt
Match: RL27_VIBF1 (50S ribosomal protein L27 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=rpmA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.358e-25
Identity = 55/82 (67.07%), Postives = 64/82 (78.05%), Query Frame = 2

Query:   38 ATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVE 283
            A KK  GST+NGRDS+ K LGVK++GGE V+ GNIIVRQRGT+FH G  VG+GKDHTLFAL EGKVKFE      RK+V +E
Sbjct:    2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLFALSEGKVKFEVKGPKNRKFVSIE 83

[Close]

BLAST of GT623083 vs. SwissProt
Match: RL27_BART1 (50S ribosomal protein L27 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=rpmA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.358e-25
Identity = 57/83 (68.67%), Postives = 66/83 (79.52%), Query Frame = 2

Query:   38 ATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEP 286
            A KK  GS++NGRDS+ K LGVKK+GGE VI GNIIVRQRGTR+HPG+ VG+GKDHTLFAL EGKV F+R K   R +V V P
Sbjct:    2 AHKKAGGSSRNGRDSESKRLGVKKFGGESVIAGNIIVRQRGTRWHPGDNVGIGKDHTLFALSEGKVSFQR-KAGNRSYVSVIP 83

[Close]

BLAST of GT623083 vs. TAIR peptide
Match: AT5G15220.1 (| Symbols: | Ribosomal protein L27 family protein | chr5:4941466-4942133 REVERSE LENGTH=154)

HSP 1 Score: 193.741 bits (491), Expect = 5.653e-50
Identity = 87/112 (77.68%), Postives = 102/112 (91.07%), Query Frame = 2

Query:    2 SGEGLSLMFYRWATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEPKEGHVLHPVYADASASE 337
            S  GLSL+F RWATKKTAGSTKNGRDS PK LGVKK+GGE VIPGNIIVRQRGTRFHPG+YVG+GKDHTLFALKEG+V+FE++K+TGRKW+HV+P  GHVLHP+Y  A+A++
Sbjct:   35 SSSGLSLVFKRWATKKTAGSTKNGRDSNPKFLGVKKFGGESVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEKSKITGRKWIHVDPTGGHVLHPIYTKAAAAQ 146

[Close]

BLAST of GT623083 vs. TAIR peptide
Match: AT2G16930.3 (| Symbols: | Ribosomal protein L27 family protein | chr2:7341492-7342118 FORWARD LENGTH=154)

HSP 1 Score: 190.274 bits (482), Expect = 6.250e-49
Identity = 86/112 (76.79%), Postives = 101/112 (90.18%), Query Frame = 2

Query:    2 SGEGLSLMFYRWATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEPKEGHVLHPVYADASASE 337
            S  GLSL+  RWATKKTAGSTKNGRDS PK LGVKK+GGE VIPGNIIVRQRGTRFHPG+YVG+GKDHTLFALKEG+V+FE++K+TGRKW+HV+P  GHVLHP+Y  A+A++
Sbjct:   35 SSSGLSLVLKRWATKKTAGSTKNGRDSNPKFLGVKKFGGESVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEKSKITGRKWIHVDPIGGHVLHPIYTKAAAAK 146

[Close]

BLAST of GT623083 vs. TAIR peptide
Match: AT2G16930.1 (| Symbols: | Ribosomal protein L27 family protein | chr2:7341492-7342118 FORWARD LENGTH=154)

HSP 1 Score: 190.274 bits (482), Expect = 6.250e-49
Identity = 86/112 (76.79%), Postives = 101/112 (90.18%), Query Frame = 2

Query:    2 SGEGLSLMFYRWATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEPKEGHVLHPVYADASASE 337
            S  GLSL+  RWATKKTAGSTKNGRDS PK LGVKK+GGE VIPGNIIVRQRGTRFHPG+YVG+GKDHTLFALKEG+V+FE++K+TGRKW+HV+P  GHVLHP+Y  A+A++
Sbjct:   35 SSSGLSLVLKRWATKKTAGSTKNGRDSNPKFLGVKKFGGESVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEKSKITGRKWIHVDPIGGHVLHPIYTKAAAAK 146

[Close]

BLAST of GT623083 vs. TAIR peptide
Match: AT2G16930.2 (| Symbols: | Ribosomal protein L27 family protein | chr2:7341492-7342118 FORWARD LENGTH=154)

HSP 1 Score: 190.274 bits (482), Expect = 6.250e-49
Identity = 86/112 (76.79%), Postives = 101/112 (90.18%), Query Frame = 2

Query:    2 SGEGLSLMFYRWATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEPKEGHVLHPVYADASASE 337
            S  GLSL+  RWATKKTAGSTKNGRDS PK LGVKK+GGE VIPGNIIVRQRGTRFHPG+YVG+GKDHTLFALKEG+V+FE++K+TGRKW+HV+P  GHVLHP+Y  A+A++
Sbjct:   35 SSSGLSLVLKRWATKKTAGSTKNGRDSNPKFLGVKKFGGESVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEKSKITGRKWIHVDPIGGHVLHPIYTKAAAAK 146

[Close]

BLAST of GT623083 vs. TAIR peptide
Match: AT5G40950.1 (| Symbols: RPL27 | ribosomal protein large subunit 27 | chr5:16410866-16411845 FORWARD LENGTH=198)

HSP 1 Score: 95.9005 bits (237), Expect = 1.604e-20
Identity = 51/85 (60.00%), Postives = 61/85 (71.76%), Query Frame = 2

Query:   38 ATKKTAGSTKNGRDSKPKNLGVKKYGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALKEGKVKFERNKLTGRKWVHVEPKE 292
            A KK AGSTKNGRDS  + LGVK YG +   PG IIVRQRGT+FH G  VG+GKDHT+F+L +G VKFE+     RK + V P+E
Sbjct:   59 AHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTKFHAGKNVGIGKDHTIFSLIDGLVKFEKFG-PDRKKISVYPRE 142

The following BLAST results are available for this feature:

BLAST of GT623083 vs. TrEMBL
BLAST of GT623083 vs. SwissProt
BLAST of GT623083 vs. TAIR peptide

BLAST of GT623083 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FGL1_MEDTR	3.527e-58	92.31	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6TCI4_SOYBN	4.767e-55	89.83	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TNN3_SOYBN	1.174e-53	87.29	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7TQ18_VITVI	4.462e-53	88.18	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9R7U5_RICCO	9.304e-51	80.34	Ribosomal protein L27, putative OS=Ricinus communi...	[more]
Q9LXF9_ARATH	5.645e-48	75.21	Ribosomal protein L27-like OS=Arabidopsis thaliana...	[more]
D2YZ62_9ORYZ	5.645e-48	79.13	Mitochondrial ribosomal protein L27 OS=Oryza glumi...	[more]
Q94AC6_ARATH	7.372e-48	77.68	AT5g15220/F8M21_110 OS=Arabidopsis thaliana GN=At5...	[more]
Q6ZKP0_ORYSJ	7.372e-48	78.26	Mitochondrial ribosomal protein L27 OS=Oryza sativ...	[more]
A2YV25_ORYSI	7.372e-48	78.26	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of GT623083 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL27_VIBPA	1.410e-25	68.29	50S ribosomal protein L27 OS=Vibrio parahaemolytic...	[more]
RL27_VIBHB	1.410e-25	68.29	50S ribosomal protein L27 OS=Vibrio harveyi (strai...	[more]
RL27_VIBVY	2.405e-25	68.29	50S ribosomal protein L27 OS=Vibrio vulnificus (st...	[more]
RL27_VIBVU	2.405e-25	68.29	50S ribosomal protein L27 OS=Vibrio vulnificus GN=...	[more]
RL27_VIBCM	4.103e-25	64.71	50S ribosomal protein L27 OS=Vibrio cholerae serot...	[more]
RL27_VIBCH	4.103e-25	64.71	50S ribosomal protein L27 OS=Vibrio cholerae GN=rp...	[more]
RL27_VIBC3	4.103e-25	64.71	50S ribosomal protein L27 OS=Vibrio cholerae serot...	[more]
RL27_VIBFM	5.358e-25	67.07	50S ribosomal protein L27 OS=Vibrio fischeri (stra...	[more]
RL27_VIBF1	5.358e-25	67.07	50S ribosomal protein L27 OS=Vibrio fischeri (stra...	[more]
RL27_BART1	5.358e-25	68.67	50S ribosomal protein L27 OS=Bartonella tribocorum...	[more]

BLAST of GT623083 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G15220.1	5.653e-50	77.68	\| Symbols: \| Ribosomal protein L27 family protein...	[more]
AT2G16930.3	6.250e-49	76.79	\| Symbols: \| Ribosomal protein L27 family protein...	[more]
AT2G16930.1	6.250e-49	76.79	\| Symbols: \| Ribosomal protein L27 family protein...	[more]
AT2G16930.2	6.250e-49	76.79	\| Symbols: \| Ribosomal protein L27 family protein...	[more]
AT5G40950.1	1.604e-20	60.00	\| Symbols: RPL27 \| ribosomal protein large subunit...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001684	Ribosomal protein L27	PRINTS	PR00063	RIBOSOMALL27	coord: 15..39 score: 5e-36coord: 40..64 score: 5e-36coord: 65..89 score: 5
IPR001684	Ribosomal protein L27	HAMAP	MF_00539	Ribosomal_L27	coord: 12..96 score: 25
IPR001684	Ribosomal protein L27	PANTHER	PTHR15893	RIBOSOMAL PROTEIN L27	coord: 19..103 score: 1.9
IPR001684	Ribosomal protein L27	PFAM	PF01016	Ribosomal_L27	coord: 13..93 score: 7.1
IPR001684	Ribosomal protein L27	TIGRFAMs	TIGR00062	L27: ribosomal protein L27	coord: 12..94 score: 5.8
IPR001684	Ribosomal protein L27	SUPERFAMILY	110324	Ribosomal L27 protein	coord: 31..97 score: 2.1
IPR018261	Ribosomal protein L27, conserved site	PROSITE	PS00831	RIBOSOMAL_L27	coord: 45..59 score
None	No IPR available	SEG	seg	seg	coord: 20..31 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT623083 ID=GT623083; Name=GT623083; organism=Lens culinaris; type=EST; length=576bp
TTCTGGAGAGGGGTTGAGTTTAATGTTCTACCGTTGGGCTACCAAAAAGA
CAGCCGGGTCAACAAAAAATGGACGCGATTCAAAACCTAAGAACCTTGGA
GTGAAGAAATATGGTGGAGAGAGGGTAATTCCCGGAAACATCATTGTTAG
GCAGCGTGGTACTCGTTTTCATCCAGGAAACTATGTTGGACTGGGTAAAG
ATCACACTCTTTTCGCTTTGAAAGAAGGAAAAGTAAAGTTTGAACGCAAC
AAGCTGACTGGTCGCAAGTGGGTGCATGTTGAGCCTAAGGAAGGTCATGT
TCTCCACCCTGTGTATGCTGATGCTTCTGCATCTGAACCACAACTTGCTG
TCTAAGCCTGATCAATTTCATTCACAATCTAATTTTTTTGGCTCATGTGA
ACTCTCAAACGTTCCATCTCTCATGTTGTTTGCACATGATTTTGTACTGA
AATCTTGAAAGATTGATTTCAGGTTGAAATAATAGTAGATGCTTTAGTTT
CTTGCCCTTTTTTTATTTGTCATCAATGTCATAGCCAAACAATTAGTTAA
ACAATTATCTGGATTGAATAGTTGTA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR001684	Ribosomal_L27
IPR018261	Ribosomal_L27_CS

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