GT624288
EST Overview
Unigenes
This EST is part of the following unigenes:
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT624288 vs. TrEMBL
Match: D7T9L2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012102001 PE=4 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 1.421e-50 Identity = 103/113 (91.15%), Postives = 108/113 (95.58%), Query Frame = 2 Query: 164 EELLQEHFNDLIKFVKAKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSALNKDLVSISSIMYEI 502 EELL EHF DLIKFVK +ASEDP+SS ++PITVAEVEPLVKDFASRWK+AIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSD IKRIPGGSALNKDLVSISSIMYEI Sbjct: 588 EELLLEHFGDLIKFVKTRASEDPSSSSERPITVAEVEPLVKDFASRWKSAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDCIKRIPGGSALNKDLVSISSIMYEI 700
BLAST of GT624288 vs. TrEMBL
Match: A5BQJ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015775 PE=4 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 1.421e-50 Identity = 103/113 (91.15%), Postives = 108/113 (95.58%), Query Frame = 2 Query: 164 EELLQEHFNDLIKFVKAKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSALNKDLVSISSIMYEI 502 EELL EHF DLIKFVK +ASEDP+SS ++PITVAEVEPLVKDFASRWK+AIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSD IKRIPGGSALNKDLVSISSIMYEI Sbjct: 33 EELLLEHFGDLIKFVKTRASEDPSSSSERPITVAEVEPLVKDFASRWKSAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDCIKRIPGGSALNKDLVSISSIMYEI 145
BLAST of GT624288 vs. TrEMBL
Match: B9S0R4_RICCO (Vacuolar protein sorting protein, putative OS=Ricinus communis GN=RCOM_1222120 PE=4 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 2.269e-48 Identity = 100/113 (88.50%), Postives = 106/113 (93.81%), Query Frame = 2 Query: 164 EELLQEHFNDLIKFVKAKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSALNKDLVSISSIMYEI 502 EELL EHF+DLIKFVK +ASEDP+S+ +KPITVAEVE +VKDF SRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSD IKRI GGSALNKDLVSISSIMYEI Sbjct: 594 EELLLEHFSDLIKFVKTRASEDPSSNSEKPITVAEVETIVKDFGSRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDCIKRIVGGSALNKDLVSISSIMYEI 706
BLAST of GT624288 vs. TrEMBL
Match: B9HDR5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_560298 PE=4 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 6.603e-48 Identity = 99/113 (87.61%), Postives = 107/113 (94.69%), Query Frame = 2 Query: 164 EELLQEHFNDLIKFVKAKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSALNKDLVSISSIMYEI 502 EELL EHF+DLIKFVK++ASE+P S +KPITVAEVE +VKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSD+IK+I GGSALNKDLVSISSIMYEI Sbjct: 599 EELLLEHFSDLIKFVKSRASEEPGSGTEKPITVAEVETIVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDTIKKIVGGSALNKDLVSISSIMYEI 711
BLAST of GT624288 vs. TrEMBL
Match: C0PTS9_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.798e-45 Identity = 93/113 (82.30%), Postives = 103/113 (91.15%), Query Frame = 2 Query: 164 EELLQEHFNDLIKFVKAKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSALNKDLVSISSIMYEI 502 EELL EHFNDLI+FVK +A E+ +SS ++P+TV EVEPLVKDFASRWK IE+MHKDVITSFSNFLCGMEIL+AALTQLLLYYTRLSD IKRI GGSALNK+LVSISSIMYEI Sbjct: 50 EELLLEHFNDLIRFVKTRAGEETSSSSERPVTVNEVEPLVKDFASRWKGTIEVMHKDVITSFSNFLCGMEILKAALTQLLLYYTRLSDCIKRIGGGSALNKELVSISSIMYEI 162
BLAST of GT624288 vs. TrEMBL
Match: D7KYT3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_476259 PE=4 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.166e-44 Identity = 91/113 (80.53%), Postives = 104/113 (92.04%), Query Frame = 2 Query: 164 EELLQEHFNDLIKFVKAKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSALNKDLVSISSIMYEI 502 EELL EHF+DLIKFVK++ASED +S+P++ ITVAEVEPLVKDF SRWK AIELM KD+ITSFSNFLCGM+ILRAALTQLLLYYTRL+D IK++ GGSALN+DLVSI SIMYEI Sbjct: 588 EELLVEHFSDLIKFVKSRASEDSSSNPERSITVAEVEPLVKDFGSRWKTAIELMDKDIITSFSNFLCGMDILRAALTQLLLYYTRLTDCIKKMDGGSALNRDLVSIQSIMYEI 700
BLAST of GT624288 vs. TrEMBL
Match: Q9FVV3_ARATH (ARE1-like protein; 78992-73047 OS=Arabidopsis thaliana GN=F3I17.8 PE=4 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 7.555e-44 Identity = 90/113 (79.65%), Postives = 102/113 (90.27%), Query Frame = 2 Query: 164 EELLQEHFNDLIKFVKAKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSALNKDLVSISSIMYEI 502 EELL EHF+DLIKFVK +ASED + +P++ IT+AEVEPLVKDF SRWK AIELM KD+ITSFSNFLCGM+ILRAALTQLLLYYTRL+D IK+I GGSALN+DLVSI SIMYEI Sbjct: 616 EELLVEHFSDLIKFVKNRASEDSSLNPERSITIAEVEPLVKDFGSRWKTAIELMDKDIITSFSNFLCGMDILRAALTQLLLYYTRLTDCIKKIDGGSALNRDLVSIQSIMYEI 728
BLAST of GT624288 vs. TrEMBL
Match: Q94KD3_ARATH (At1g71270/F3I17_8 OS=Arabidopsis thaliana GN=At1g71270 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 7.555e-44 Identity = 90/113 (79.65%), Postives = 102/113 (90.27%), Query Frame = 2 Query: 164 EELLQEHFNDLIKFVKAKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSALNKDLVSISSIMYEI 502 EELL EHF+DLIKFVK +ASED + +P++ IT+AEVEPLVKDF SRWK AIELM KD+ITSFSNFLCGM+ILRAALTQLLLYYTRL+D IK+I GGSALN+DLVSI SIMYEI Sbjct: 588 EELLVEHFSDLIKFVKNRASEDSSLNPERSITIAEVEPLVKDFGSRWKTAIELMDKDIITSFSNFLCGMDILRAALTQLLLYYTRLTDCIKKIDGGSALNRDLVSIQSIMYEI 700
BLAST of GT624288 vs. TrEMBL
Match: Q68EC6_ARATH (ARE1-like protein OS=Arabidopsis thaliana GN=POKY POLLEN TUBE PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 7.555e-44 Identity = 90/113 (79.65%), Postives = 102/113 (90.27%), Query Frame = 2 Query: 164 EELLQEHFNDLIKFVKAKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSALNKDLVSISSIMYEI 502 EELL EHF+DLIKFVK +ASED + +P++ IT+AEVEPLVKDF SRWK AIELM KD+ITSFSNFLCGM+ILRAALTQLLLYYTRL+D IK+I GGSALN+DLVSI SIMYEI Sbjct: 588 EELLVEHFSDLIKFVKNRASEDSSLNPERSITIAEVEPLVKDFGSRWKTAIELMDKDIITSFSNFLCGMDILRAALTQLLLYYTRLTDCIKKIDGGSALNRDLVSIQSIMYEI 700
BLAST of GT624288 vs. TrEMBL
Match: Q56WP0_ARATH (ARE1-like protein OS=Arabidopsis thaliana GN=At1g71270 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 7.555e-44 Identity = 90/113 (79.65%), Postives = 102/113 (90.27%), Query Frame = 2 Query: 164 EELLQEHFNDLIKFVKAKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSALNKDLVSISSIMYEI 502 EELL EHF+DLIKFVK +ASED + +P++ IT+AEVEPLVKDF SRWK AIELM KD+ITSFSNFLCGM+ILRAALTQLLLYYTRL+D IK+I GGSALN+DLVSI SIMYEI Sbjct: 33 EELLVEHFSDLIKFVKNRASEDSSLNPERSITIAEVEPLVKDFGSRWKTAIELMDKDIITSFSNFLCGMDILRAALTQLLLYYTRLTDCIKKIDGGSALNRDLVSIQSIMYEI 145
BLAST of GT624288 vs. SwissProt
Match: VPS52_RAT (Vacuolar protein sorting-associated protein 52 homolog OS=Rattus norvegicus GN=Vps52 PE=2 SV=2) HSP 1 Score: 60.8474 bits (146), Expect = 9.662e-9 Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 2 Query: 164 EELLQEHFNDLIKFVK-AKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSAL--NKDLVSISSIMYEI 502 EELL F L+ FVK A+A + + A V L++ F S WKA++E + +DV+ SF+NF G I++ ALTQL+ Y R + + P AL +L++I +M E+ Sbjct: 602 EELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKASVESLSQDVMRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQ-PQLRALPARAELINIHHLMVEL 716
BLAST of GT624288 vs. SwissProt
Match: VPS52_MOUSE (Vacuolar protein sorting-associated protein 52 homolog OS=Mus musculus GN=Vps52 PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 9.662e-9 Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 2 Query: 164 EELLQEHFNDLIKFVK-AKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSAL--NKDLVSISSIMYEI 502 EELL F L+ FVK A+A + + A V L++ F S WKA++E + +DV+ SF+NF G I++ ALTQL+ Y R + + P AL +L++I +M E+ Sbjct: 602 EELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKASVESLSQDVMRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQ-PQLRALPARAELINIHHLMVEL 716
BLAST of GT624288 vs. SwissProt
Match: VPS52_HUMAN (Vacuolar protein sorting-associated protein 52 homolog OS=Homo sapiens GN=VPS52 PE=1 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 2.152e-8 Identity = 41/116 (35.34%), Postives = 64/116 (55.17%), Query Frame = 2 Query: 164 EELLQEHFNDLIKFVK-AKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSAL--NKDLVSISSIMYEI 502 EELL F L+ FVK A+A + + A V L++ F S WK+++E + +DV+ SF+NF G I++ ALTQL+ Y R + + P AL +L++I +M E+ Sbjct: 602 EELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKSSVESLSQDVMRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQ-PQLRALPARAELINIHHLMVEL 716
BLAST of GT624288 vs. SwissProt
Match: VPS52_CANFA (Vacuolar protein sorting-associated protein 52 homolog OS=Canis familiaris GN=VPS52 PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 2.152e-8 Identity = 41/116 (35.34%), Postives = 64/116 (55.17%), Query Frame = 2 Query: 164 EELLQEHFNDLIKFVK-AKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSAL--NKDLVSISSIMYEI 502 EELL F L+ FVK A+A + + A V L++ F S WK+++E + +DV+ SF+NF G I++ ALTQL+ Y R + + P AL +L++I +M E+ Sbjct: 602 EELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKSSVESLSQDVMRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQ-PQLRALPARAELINIHHLMVEL 716
BLAST of GT624288 vs. TAIR peptide
Match: AT1G71270.1 (| Symbols: POK, TTD8, ATVPS52 | Vps52 / Sac2 family | chr1:26863736-26869817 FORWARD LENGTH=707) HSP 1 Score: 181.415 bits (459), Expect = 4.882e-46 Identity = 90/113 (79.65%), Postives = 102/113 (90.27%), Query Frame = 2 Query: 164 EELLQEHFNDLIKFVKAKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSALNKDLVSISSIMYEI 502 EELL EHF+DLIKFVK +ASED + +P++ IT+AEVEPLVKDF SRWK AIELM KD+ITSFSNFLCGM+ILRAALTQLLLYYTRL+D IK+I GGSALN+DLVSI SIMYEI Sbjct: 588 EELLVEHFSDLIKFVKNRASEDSSLNPERSITIAEVEPLVKDFGSRWKTAIELMDKDIITSFSNFLCGMDILRAALTQLLLYYTRLTDCIKKIDGGSALNRDLVSIQSIMYEI 700
BLAST of GT624288 vs. TAIR peptide
Match: AT1G71300.1 (| Symbols: | Vps52 / Sac2 family | chr1:26874064-26878319 FORWARD LENGTH=721) HSP 1 Score: 167.933 bits (424), Expect = 5.586e-42 Identity = 81/113 (71.68%), Postives = 98/113 (86.73%), Query Frame = 2 Query: 164 EELLQEHFNDLIKFVKAKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSALNKDLVSISSIMYEI 502 EELL EHF+D+IKFVK++A+ED + + ++ ITVAEVEPLVKDF SRWK AIELMHKD+IT FSNFLCGM+IL A +TQLLLYYTRL D IK+I GGSALN+D+V+ SIM+EI Sbjct: 602 EELLVEHFSDMIKFVKSRANEDSSPNLERSITVAEVEPLVKDFGSRWKTAIELMHKDIITCFSNFLCGMDILIAGMTQLLLYYTRLEDCIKKIDGGSALNRDIVNYQSIMFEI 714 The following BLAST results are available for this feature:
BLAST of GT624288 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT624288 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 4
BLAST of GT624288 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT624288 ID=GT624288; Name=GT624288; organism=Lens culinaris; type=EST; length=785bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|