GT626264

EST Overview


Name	GT626264
Unique Name	GT626264
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	568

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
KEGG analysis for Lens culinaris unigene v1	2011-01-05
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT626264 vs. TrEMBL
Match: Q8S5C2_SOYBN (4-coumarate:CoA ligase isoenzyme 3 OS=Glycine max GN=Gm4CL-3 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.054e-39
Identity = 86/94 (91.49%), Postives = 88/94 (93.62%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLEN-STQMP 280
            ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRS G DLTEE VKEFI+KQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLE  +TQ P
Sbjct:  477 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGFDLTEEAVKEFIAKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLETAATQTP 570

[Close]

BLAST of GT626264 vs. TrEMBL
Match: C0LUU7_SOYBN (4-coumarate:CoA ligase OS=Glycine max GN=4CL PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.054e-39
Identity = 86/94 (91.49%), Postives = 88/94 (93.62%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLEN-STQMP 280
            ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRS G DLTEE VKEFI+KQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLE  +TQ P
Sbjct:  469 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGFDLTEEAVKEFIAKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLETAATQTP 562

[Close]

BLAST of GT626264 vs. TrEMBL
Match: D7T7P9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_39.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024400001 PE=4 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.262e-36
Identity = 81/93 (87.10%), Postives = 82/93 (88.17%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLENSTQMP 280
            ELE LLVSHPSIADAAVVPQKD  AGEVPVAFVVRS G +LTEE VKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKL   T  P
Sbjct:  419 ELEALLVSHPSIADAAVVPQKDDVAGEVPVAFVVRSNGFELTEEAVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLAEKTPEP 511

[Close]

BLAST of GT626264 vs. TrEMBL
Match: A5AXP2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031171 PE=4 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.262e-36
Identity = 81/93 (87.10%), Postives = 82/93 (88.17%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLENSTQMP 280
            ELE LLVSHPSIADAAVVPQKD  AGEVPVAFVVRS G +LTEE VKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKL   T  P
Sbjct:  438 ELEALLVSHPSIADAAVVPQKDDVAGEVPVAFVVRSNGFELTEEAVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLAEKTPEP 530

[Close]

BLAST of GT626264 vs. TrEMBL
Match: D5LNB6_SORAU (p-coumarate:CoA-ligase 3 OS=Sorbus aucuparia PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.632e-34
Identity = 76/90 (84.44%), Postives = 82/90 (91.11%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLENST 271
            ELE LL+SHPSIADAAVVPQ+D AAGEVPVAFVVRS G +LTEE VKEFI+KQVVFYKRLHKV+FVHAIPKS SGKILRKDLRAKL  +T
Sbjct:  512 ELESLLISHPSIADAAVVPQRDDAAGEVPVAFVVRSDGLELTEEAVKEFIAKQVVFYKRLHKVHFVHAIPKSASGKILRKDLRAKLATAT 601

[Close]

BLAST of GT626264 vs. TrEMBL
Match: Q42880_LITER (4-coumarate:CoA ligase OS=Lithospermum erythrorhizon PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.706e-33
Identity = 76/87 (87.36%), Postives = 80/87 (91.95%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSK-GNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKL 259
            ELE LL+SHP+IADAAVVPQKD AAGEVPVAFVV S  G +LTEE VKEFISKQVVFYKRLHKVYFVH+IPKSPSGKILRKDLRAKL
Sbjct:  493 ELEALLISHPNIADAAVVPQKDAAAGEVPVAFVVPSNDGFELTEEAVKEFISKQVVFYKRLHKVYFVHSIPKSPSGKILRKDLRAKL 579

[Close]

BLAST of GT626264 vs. TrEMBL
Match: Q6QHK1_ALLCE (4-coumaroyl-coenzyme A ligase OS=Allium cepa PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.910e-33
Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLENST 271
            ELE LLVSHP IADAAV+PQKD  AGEVPVAFVV++ G+D+TE+ VKEFISKQVVFYKRL  VYFVHAIPKSPSGKILRKDLRA+L + T
Sbjct:  452 ELESLLVSHPCIADAAVIPQKDEVAGEVPVAFVVKASGSDITEDAVKEFISKQVVFYKRLQTVYFVHAIPKSPSGKILRKDLRARLSSFT 541

[Close]

BLAST of GT626264 vs. TrEMBL
Match: Q2YHM8_PLAMJ (4-coumaryl-CoA ligase (Fragment) OS=Plantago major GN=4CL1 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.964e-33
Identity = 73/89 (82.02%), Postives = 81/89 (91.01%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLENS 268
            ELE LLVSHP+IADAAVVP+ D AAGEVPVAFVVRS G +LTEE VK+FI+KQVVFYKRLH VYFVHAIPKSP+GKILRKDLRAKL ++
Sbjct:  112 ELEALLVSHPNIADAAVVPKIDEAAGEVPVAFVVRSNGFELTEEAVKDFIAKQVVFYKRLHSVYFVHAIPKSPAGKILRKDLRAKLASA 200

[Close]

BLAST of GT626264 vs. TrEMBL
Match: B9S209_RICCO (AMP dependent CoA ligase, putative OS=Ricinus communis GN=RCOM_1325310 PE=4 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.483e-33
Identity = 71/86 (82.56%), Postives = 80/86 (93.02%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKL 259
            ELE LL++HPSIADAAVVPQKD  AGEVPVAFVVRS G +L+EE VKE+I+KQVVFYK+LHKVYF+HAIPKSPSGKILRKDL+AKL
Sbjct:  481 ELEALLLNHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELSEEDVKEYIAKQVVFYKKLHKVYFIHAIPKSPSGKILRKDLKAKL 566

[Close]

BLAST of GT626264 vs. TrEMBL
Match: B6RIV4_RUTGR (4-coumarate:CoA ligase 1 OS=Ruta graveolens PE=4 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.483e-33
Identity = 73/93 (78.49%), Postives = 80/93 (86.02%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLENSTQMP 280
            E+E LL+ HPSIADAAVVPQKD AAGEVPVAFVV S G + TEE  KE+I+KQVVFYKRLH+VYFV AIPKSPSGKILRK LRAKL +ST MP
Sbjct:  489 EIEALLIGHPSIADAAVVPQKDEAAGEVPVAFVVGSNGFEQTEESTKEYIAKQVVFYKRLHRVYFVDAIPKSPSGKILRKGLRAKLASSTSMP 581

[Close]

BLAST of GT626264 vs. SwissProt
Match: 4CL2_SOYBN (4-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 4.477e-40
Identity = 86/94 (91.49%), Postives = 88/94 (93.62%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLEN-STQMP 280
            ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRS G DLTEE VKEFI+KQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLE  +TQ P
Sbjct:  469 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGFDLTEEAVKEFIAKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLETAATQTP 562

[Close]

BLAST of GT626264 vs. SwissProt
Match: 4CL2_ORYSJ (Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa subsp. japonica GN=4CL2 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 4.059e-33
Identity = 69/86 (80.23%), Postives = 79/86 (91.86%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKL 259
            ELE LL++HPSIADAAVVPQKD  AGEVPVAFVVR+  +D+TEE +KEFISKQVVFYKRLHKV+F+HAIPKS SGKILR++LRAKL
Sbjct:  481 ELESLLIAHPSIADAAVVPQKDDVAGEVPVAFVVRAADSDITEESIKEFISKQVVFYKRLHKVHFIHAIPKSASGKILRRELRAKL 566

[Close]

BLAST of GT626264 vs. SwissProt
Match: 4CL3_ARATH (4-coumarate--CoA ligase 3 OS=Arabidopsis thaliana GN=4CL3 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 9.042e-33
Identity = 69/86 (80.23%), Postives = 78/86 (90.70%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKL 259
            ELE LL++H SIADAAVVPQ D  AGEVPVAFVVRS GND+TEE VKE+++KQVVFYKRLHKV+FV +IPKSPSGKILRKDL+AKL
Sbjct:  475 ELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGNDITEEDVKEYVAKQVVFYKRLHKVFFVASIPKSPSGKILRKDLKAKL 560

[Close]

BLAST of GT626264 vs. SwissProt
Match: 4CL2_TOBAC (4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.444e-30
Identity = 65/86 (75.58%), Postives = 77/86 (89.53%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKL 259
            ELE LL++HP+I+DAAVVP KD  AGEVPVAFVVRS G+ +TE+ VK+FISKQV+FYKR+ +V+FV AIPKSPSGKILRKDLRAKL
Sbjct:  451 ELEALLLNHPNISDAAVVPMKDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVDAIPKSPSGKILRKDLRAKL 536

[Close]

BLAST of GT626264 vs. SwissProt
Match: 4CL_VANPL (4-coumarate--CoA ligase OS=Vanilla planifolia GN=4CL PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.462e-30
Identity = 62/86 (72.09%), Postives = 79/86 (91.86%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKL 259
            ELE LL++HP I+DAAVVP KD AAGEVPVAFVV+S G+++TE+ +K+FISKQV+FYKR+++V+FV AIPK+PSGKILRKDLRA+L
Sbjct:  460 ELEALLLTHPCISDAAVVPMKDEAAGEVPVAFVVKSNGHNITEDEIKQFISKQVIFYKRINRVFFVEAIPKAPSGKILRKDLRARL 545

[Close]

BLAST of GT626264 vs. SwissProt
Match: 4CL1_TOBAC (4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.722e-29
Identity = 61/86 (70.93%), Postives = 76/86 (88.37%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKL 259
            E+E LL++HP+I+DAAVVP KD  AGEVPVAFVVRS G+ +TE+ VK+FISKQV+FYKR+ +V+FV  +PKSPSGKILRKDLRA+L
Sbjct:  456 EIEALLLNHPNISDAAVVPMKDEQAGEVPVAFVVRSNGSAITEDEVKDFISKQVIFYKRVKRVFFVETVPKSPSGKILRKDLRARL 541

[Close]

BLAST of GT626264 vs. SwissProt
Match: 4CL1_SOYBN (4-coumarate--CoA ligase 1 (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.644e-29
Identity = 65/90 (72.22%), Postives = 77/90 (85.56%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKG-NDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLENS 268
            ELE LL++HP I+DAAVVP KD AAGEVPVAFVV S G  D TE+ +K+FISKQVVFYKR+++V+F+ AIPKSPSGKILRKDLRAK+  S
Sbjct:  201 ELEALLLTHPKISDAAVVPMKDEAAGEVPVAFVVISNGYTDTTEDEIKQFISKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKIAAS 290

[Close]

BLAST of GT626264 vs. SwissProt
Match: 4CL_PINTA (4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.065e-29
Identity = 62/86 (72.09%), Postives = 78/86 (90.70%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKL 259
            ELE LLV+HPSIADAAVVPQK   AGEVPVAFVV+S  ++++E+ +KEF++KQV+FYK++H+VYFV AIPKSPSGKILRKDLR++L
Sbjct:  451 ELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKS--SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRL 534

[Close]

BLAST of GT626264 vs. SwissProt
Match: 4CL2_SOLTU (4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.065e-29
Identity = 61/86 (70.93%), Postives = 74/86 (86.05%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKL 259
            ELE LL++HP I+DAAVVP  D  AGEVPVAFVVRS G+ +TE+ VK+FISKQV+FYKR+ +V+FV  +PKSPSGKILRKDLRA+L
Sbjct:  454 ELEALLINHPDISDAAVVPMIDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVETVPKSPSGKILRKDLRARL 539

[Close]

BLAST of GT626264 vs. SwissProt
Match: 4CL1_SOLTU (4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=4CL1 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.065e-29
Identity = 61/86 (70.93%), Postives = 74/86 (86.05%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKL 259
            ELE LL++HP I+DAAVVP  D  AGEVPVAFVVRS G+ +TE+ VK+FISKQV+FYKR+ +V+FV  +PKSPSGKILRKDLRA+L
Sbjct:  454 ELEALLINHPDISDAAVVPMIDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVETVPKSPSGKILRKDLRARL 539

[Close]

BLAST of GT626264 vs. TAIR peptide
Match: AT1G65060.1 (| Symbols: 4CL3 | 4-coumarate:CoA ligase 3 | chr1:24167385-24171457 REVERSE LENGTH=561)

HSP 1 Score: 139.813 bits (351), Expect = 9.485e-34
Identity = 69/86 (80.23%), Postives = 78/86 (90.70%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKL 259
            ELE LL++H SIADAAVVPQ D  AGEVPVAFVVRS GND+TEE VKE+++KQVVFYKRLHKV+FV +IPKSPSGKILRKDL+AKL
Sbjct:  475 ELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGNDITEEDVKEYVAKQVVFYKRLHKVFFVASIPKSPSGKILRKDLKAKL 560

[Close]

BLAST of GT626264 vs. TAIR peptide
Match: AT1G51680.1 (| Symbols: 4CL1, 4CL.1, AT4CL1 | 4-coumarate:CoA ligase 1 | chr1:19159007-19161464 REVERSE LENGTH=561)

HSP 1 Score: 126.716 bits (317), Expect = 8.309e-30
Identity = 61/88 (69.32%), Postives = 75/88 (85.23%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLEN 265
            ELE LL+ HP I D AVV  K+ AAGEVPVAFVV+SK ++L+E+ VK+F+SKQVVFYKR++KV+F  +IPK+PSGKILRKDLRAKL N
Sbjct:  472 ELEALLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDSELSEDDVKQFVSKQVVFYKRINKVFFTESIPKAPSGKILRKDLRAKLAN 559

[Close]

BLAST of GT626264 vs. TAIR peptide
Match: AT3G21240.1 (| Symbols: 4CL2, AT4CL2 | 4-coumarate:CoA ligase 2 | chr3:7454497-7457314 REVERSE LENGTH=556)

HSP 1 Score: 121.709 bits (304), Expect = 2.673e-28
Identity = 58/88 (65.91%), Postives = 74/88 (84.09%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLEN 265
            ELE LL+ HP I D AVV  K+  AGEVPVAFVVRSK ++++E+ +K+F+SKQVVFYKR++KV+F  +IPK+PSGKILRKDLRA+L N
Sbjct:  465 ELESLLIGHPEINDVAVVAMKEEDAGEVPVAFVVRSKDSNISEDEIKQFVSKQVVFYKRINKVFFTDSIPKAPSGKILRKDLRARLAN 552

[Close]

BLAST of GT626264 vs. TAIR peptide
Match: AT3G21230.1 (| Symbols: 4CL5 | 4-coumarate:CoA ligase 5 | chr3:7448231-7451947 REVERSE LENGTH=570)

HSP 1 Score: 117.857 bits (294), Expect = 3.860e-27
Identity = 59/87 (67.82%), Postives = 70/87 (80.46%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLE 262
            ELE LL+SHPSI DAAVV  KD  A EVPVAFV RS+G+ LTE+ VK +++KQVV YKR+  V+F+  IPK+ SGKILRKDLRAKLE
Sbjct:  479 ELEALLISHPSIDDAAVVAMKDEVADEVPVAFVARSQGSQLTEDDVKSYVNKQVVHYKRIKMVFFIEVIPKAVSGKILRKDLRAKLE 565

[Close]

BLAST of GT626264 vs. TAIR peptide
Match: AT4G05160.1 (| Symbols: | AMP-dependent synthetase and ligase family protein | chr4:2664451-2666547 FORWARD LENGTH=544)

HSP 1 Score: 102.064 bits (253), Expect = 2.192e-22
Identity = 49/82 (59.76%), Postives = 64/82 (78.05%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDL 247
            ELEGLLVSHP I DA V+P  D  AGEVP+AFVVRS  + +TE+ +++FI+KQV  YKRL +V F+  +PKS +GKILR++L
Sbjct:  455 ELEGLLVSHPDILDAVVIPFPDEEAGEVPIAFVVRSPNSSITEQDIQKFIAKQVAPYKRLRRVSFISLVPKSAAGKILRREL 536

[Close]

BLAST of GT626264 vs. TAIR peptide
Match: AT1G20510.1 (| Symbols: OPCL1 | OPC-8:0 CoA ligase1 | chr1:7103645-7105856 REVERSE LENGTH=546)

HSP 1 Score: 101.293 bits (251), Expect = 3.739e-22
Identity = 48/82 (58.54%), Postives = 63/82 (76.83%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDL 247
            ELE LL++HP I DAAV+P  D   G+ P+A+VVR  G+ L+E+ + EF++KQV  YKR+ KV FV +IPK+PSGKILRKDL
Sbjct:  455 ELEALLLTHPEITDAAVIPFPDKEVGQFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDL 536

[Close]

BLAST of GT626264 vs. TAIR peptide
Match: AT1G20480.1 (| Symbols: | AMP-dependent synthetase and ligase family protein | chr1:7094978-7097073 REVERSE LENGTH=565)

HSP 1 Score: 95.1301 bits (235), Expect = 2.679e-20
Identity = 44/82 (53.66%), Postives = 65/82 (79.27%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDL 247
            ELE LL++HP IADAAV+P  D+ AG+ P+A++VR  G++L+E  +  F++KQV  YK++ KV F+ +IPK+PSGKILR++L
Sbjct:  476 ELEALLLAHPEIADAAVIPIPDMKAGQYPMAYIVRKVGSNLSESEIMGFVAKQVSPYKKIRKVTFLASIPKNPSGKILRREL 557

[Close]

BLAST of GT626264 vs. TAIR peptide
Match: AT1G20500.1 (| Symbols: | AMP-dependent synthetase and ligase family protein | chr1:7100502-7102847 REVERSE LENGTH=550)

HSP 1 Score: 93.9745 bits (232), Expect = 5.969e-20
Identity = 46/82 (56.10%), Postives = 63/82 (76.83%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDL 247
            ELE LL++HP I DAAV+P  D  AG+ P+A+VVR   ++L+E+ V +FISKQV  YK++ KV F+++IPK+ SGK LRKDL
Sbjct:  461 ELEALLITHPDILDAAVIPFPDKEAGQYPMAYVVRKHESNLSEKQVIDFISKQVAPYKKIRKVSFINSIPKTASGKTLRKDL 542

[Close]

BLAST of GT626264 vs. TAIR peptide
Match: AT5G38120.1 (| Symbols: 4CL8 | AMP-dependent synthetase and ligase family protein | chr5:15213773-15216137 FORWARD LENGTH=550)

HSP 1 Score: 93.2041 bits (230), Expect = 1.018e-19
Identity = 46/82 (56.10%), Postives = 61/82 (74.39%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDL 247
            ELE LL++HP I DAAV+P  D  AG+ P+A+V R   ++L E+ V +FISKQV  YK++ KV F+ +IPK+PSGK LRKDL
Sbjct:  461 ELEALLLNHPDILDAAVIPFPDKEAGQFPMAYVARKPESNLCEKKVIDFISKQVAPYKKIRKVAFIDSIPKTPSGKTLRKDL 542

[Close]

BLAST of GT626264 vs. TAIR peptide
Match: AT5G63380.1 (| Symbols: | AMP-dependent synthetase and ligase family protein | chr5:25387581-25390026 REVERSE LENGTH=562)

HSP 1 Score: 92.4337 bits (228), Expect = 1.737e-19
Identity = 43/82 (52.44%), Postives = 64/82 (78.05%), Query Frame = 2

Query:    2 ELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSKGNDLTEEIVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDL 247
            ELE +L S+P + DAAVVP  D  AGE+P+AF+VR  G++L E  + +F++KQV  YK++ +V F++AIPK+P+GKILR++L
Sbjct:  469 ELEQILHSNPDVIDAAVVPFPDEDAGEIPMAFIVRKPGSNLNEAQIIDFVAKQVTPYKKVRRVAFINAIPKNPAGKILRREL 550

The following BLAST results are available for this feature:

BLAST of GT626264 vs. TrEMBL
BLAST of GT626264 vs. SwissProt
BLAST of GT626264 vs. TAIR peptide

BLAST of GT626264 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q8S5C2_SOYBN	6.054e-39	91.49	4-coumarate:CoA ligase isoenzyme 3 OS=Glycine max ...	[more]
C0LUU7_SOYBN	6.054e-39	91.49	4-coumarate:CoA ligase OS=Glycine max GN=4CL PE=2 ...	[more]
D7T7P9_VITVI	1.262e-36	87.10	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5AXP2_VITVI	1.262e-36	87.10	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D5LNB6_SORAU	2.632e-34	84.44	p-coumarate:CoA-ligase 3 OS=Sorbus aucuparia PE=2 ...	[more]
Q42880_LITER	1.706e-33	87.36	4-coumarate:CoA ligase OS=Lithospermum erythrorhiz...	[more]
Q6QHK1_ALLCE	2.910e-33	80.00	4-coumaroyl-coenzyme A ligase OS=Allium cepa PE=2 ...	[more]
Q2YHM8_PLAMJ	4.964e-33	82.02	4-coumaryl-CoA ligase (Fragment) OS=Plantago major...	[more]
B9S209_RICCO	6.483e-33	82.56	AMP dependent CoA ligase, putative OS=Ricinus comm...	[more]
B6RIV4_RUTGR	6.483e-33	78.49	4-coumarate:CoA ligase 1 OS=Ruta graveolens PE=4 S...	[more]

BLAST of GT626264 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
4CL2_SOYBN	4.477e-40	91.49	4-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2	[more]
4CL2_ORYSJ	4.059e-33	80.23	Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa...	[more]
4CL3_ARATH	9.042e-33	80.23	4-coumarate--CoA ligase 3 OS=Arabidopsis thaliana ...	[more]
4CL2_TOBAC	1.444e-30	75.58	4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=...	[more]
4CL_VANPL	2.462e-30	72.09	4-coumarate--CoA ligase OS=Vanilla planifolia GN=4...	[more]
4CL1_TOBAC	2.722e-29	70.93	4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=...	[more]
4CL1_SOYBN	4.644e-29	72.22	4-coumarate--CoA ligase 1 (Fragment) OS=Glycine ma...	[more]
4CL_PINTA	6.065e-29	72.09	4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2...	[more]
4CL2_SOLTU	6.065e-29	70.93	4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=...	[more]
4CL1_SOLTU	6.065e-29	70.93	4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=...	[more]

BLAST of GT626264 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT1G65060.1	9.485e-34	80.23	\| Symbols: 4CL3 \| 4-coumarate:CoA ligase 3 \| chr1:...	[more]
AT1G51680.1	8.309e-30	69.32	\| Symbols: 4CL1, 4CL.1, AT4CL1 \| 4-coumarate:CoA l...	[more]
AT3G21240.1	2.673e-28	65.91	\| Symbols: 4CL2, AT4CL2 \| 4-coumarate:CoA ligase 2...	[more]
AT3G21230.1	3.860e-27	67.82	\| Symbols: 4CL5 \| 4-coumarate:CoA ligase 5 \| chr3:...	[more]
AT4G05160.1	2.192e-22	59.76	\| Symbols: \| AMP-dependent synthetase and ligase ...	[more]
AT1G20510.1	3.739e-22	58.54	\| Symbols: OPCL1 \| OPC-8:0 CoA ligase1 \| chr1:7103...	[more]
AT1G20480.1	2.679e-20	53.66	\| Symbols: \| AMP-dependent synthetase and ligase ...	[more]
AT1G20500.1	5.969e-20	56.10	\| Symbols: \| AMP-dependent synthetase and ligase ...	[more]
AT5G38120.1	1.018e-19	56.10	\| Symbols: 4CL8 \| AMP-dependent synthetase and lig...	[more]
AT5G63380.1	1.737e-19	52.44	\| Symbols: \| AMP-dependent synthetase and ligase ...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.300.30	no description	coord: 1..89 score: 5.1
None	No IPR available	PANTHER	PTHR11968	ATP-DEPENDENT AMP-BINDING ENZYME FAMILY MEMBER	coord: 1..88 score: 1.7
None	No IPR available	PANTHER	PTHR11968:SF43	4-COUMARATE--COA LIGASE	coord: 1..88 score: 1.7
None	No IPR available	SUPERFAMILY	56801	Acetyl-CoA synthetase-like	coord: 1..88 score: 2.3

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT626264 ID=GT626264; Name=GT626264; organism=Lens culinaris; type=EST; length=568bp
TGAACTTGAAGGCCTTCTCGTAAGCCATCCATCAATAGCAGACGCAGCTG
TTGTTCCGCAAAAAGATGTTGCTGCTGGTGAAGTTCCTGTAGCCTTTGTG
GTAAGATCAAAAGGAAATGATTTAACTGAAGAGATTGTAAAGGAGTTTAT
ATCTAAACAGGTGGTGTTTTATAAAAGACTACACAAAGTTTATTTCGTTC
ATGCAATTCCCAAATCTCCATCAGGAAAGATATTGAGGAAAGACTTGAGA
GCAAAGCTTGAAAACTCTACTCAAATGCCTTAGAAGATAGAATCATTTTC
ACTCTTTTTTTTGGTCGCTATTACCTCTTCCTTATTTGTTCATTTGTATC
CTACTAGGTCTCACGCGTAATTTATGTATTTATAATCTAAGGTATAAATC
CAATAAGTAGTTCTATGAGCACACACTCCACACCCTCCATTGTAATTTTA
AGCCAATTGCCTTTACTTTTCTGTGGTTCGTTGTGCTTGTAATGTGTGAG
TTGGAAGACATTATTGTTACTATCAATCTTCGTGGCTCTTGTTTATCAAA
GAAAATTTTATTTTATTT

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