GT627384

EST Overview


Name	GT627384
Unique Name	GT627384
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	714

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
KEGG analysis for Lens culinaris unigene v1	2011-01-05
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT627384 vs. TrEMBL
Match: Q2PEZ6_TRIPR (Putative transcription factor EREBP OS=Trifolium pratense PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.192e-73
Identity = 146/207 (70.53%), Postives = 155/207 (74.88%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNLRKNGLKKP-FLLDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASGNKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKRVKPNAETEMMLLNKNLNS 712
            MCGGAIISDFIPA AAVGGSRRVTADILWPNLRK G KK  FLLDDDFEAGFR                  GL++GVKGF FA+ N KSSR FSRGS  AK VASK NEQAEKE+KRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT              IRG KAKVNFP+E PNAS+KR+K N + +  LLNKNLNS
Sbjct:    1 MCGGAIISDFIPAAAAVGGSRRVTADILWPNLRKTGSKKSSFLLDDDFEAGFRQFKDDSDFDEDEDEDDDEGLLVGVKGFTFAASNNKSSRNFSRGSAGAKSVASKSNEQAEKESKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPDEAPNASSKRLKTNPDNQ--LLNKNLNS 205

[Close]

BLAST of GT627384 vs. TrEMBL
Match: D2CPV3_VICFA (Putative ethylene responsive factor OS=Vicia faba GN=ERF2 PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.376e-67
Identity = 130/179 (72.63%), Postives = 137/179 (76.54%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNLRKNGLKKPFLLDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASGNKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPE 631
            MCGG IISDFIP TAAVGGSRRVTADILWP+LRKNGLKKPFLLDDDFEAGFR                  GLMLGVKGF F+S N KSSRTFSRGS AAKPV SK NE AEK++KRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTF+T              IRG KAK+NFP+
Sbjct:    1 MCGGTIISDFIPPTAAVGGSRRVTADILWPSLRKNGLKKPFLLDDDFEAGFREFKDDSDFDEDEDEEEDEGLMLGVKGFSFSSANNKSSRTFSRGSSAAKPVVSKSNEPAEKDSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFSTAEQAARAYDAAAKRIRGDKAKLNFPD 179

[Close]

BLAST of GT627384 vs. TrEMBL
Match: A4UNV2_MEDFA (Ethylene-responsive element binding protein OS=Medicago falcata GN=EREBP PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.797e-67
Identity = 139/208 (66.83%), Postives = 152/208 (73.08%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNLR-KNGLKKPFLLDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASG-NKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKRVKPNAETEMMLLNKNLNS 712
            MCGGAIIS FIPA AAVGGSRRVTADILWPNLR K   +KPFLLDDDFEAGFR                  GL++GVKGF F S  N KSS++F RGS AAKPVA   N+ AEK++KRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT              IRG KAKVNFPEE P AS+KR+K + ET+  LLN+NLNS
Sbjct:    1 MCGGAIISGFIPAAAAVGGSRRVTADILWPNLRRKPSSRKPFLLDDDFEAGFREFKDDSDFDEDEDEDDDEGLLVGVKGFTFGSNKNNKSSKSFVRGSSAAKPVALNSNKLAEKDSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPEEAPVASSKRLKKSPETQ--LLNENLNS 206

[Close]

BLAST of GT627384 vs. TrEMBL
Match: B6EBS4_9FABA (Dehydration-responsive element binding protein OS=Galega orientalis GN=DREB PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 4.143e-64
Identity = 134/206 (65.05%), Postives = 143/206 (69.42%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNLRKNGLKKPFLLDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASGNKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKRVKPNAETEMMLLNKNLNS 712
            MCGGAIISDFIPA AA+GGSRRVTADILWPNLRK G +K FLLDDDFEAGFR                       VKGF F  G+ KSS++FS+G  AAK V  K NEQAEKE+KRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT              IRG KAKVNFPEE P  S+KR+KPN E       KNLNS
Sbjct:    1 MCGGAIISDFIPAAAALGGSRRVTADILWPNLRKPGTRKSFLLDDDFEAGFREFKDDSDFDDDEDEDD------NVKGFTF--GSSKSSKSFSKGPAAAKSVVPKSNEQAEKESKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPEEAPVISSKRIKPNPE-------KNLNS 191

[Close]

BLAST of GT627384 vs. TrEMBL
Match: Q7XAU4_SOYBN (Ethylene responsive protein OS=Glycine max GN=EREB PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.405e-50
Identity = 123/208 (59.13%), Postives = 134/208 (64.42%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNLRKNGLKKPFLLDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFA-SGNKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPN-ASTKRVKPNAETEMMLLNKNLNS 712
            MCGGAIISDFIPA  A  G+RRVTADILWP+LRK    KP LLDDDFEAGFR                     L  K FGF+ S NK +S+  SRG+   K V SK   QAEK  KRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTF+T              IRG KAKVNFP+E    AS+KR+K N E + M   KNLNS
Sbjct:    1 MCGGAIISDFIPAGPA-SGARRVTADILWPSLRKR-FSKP-LLDDDFEAGFREFKDDSEIEDVDDEDDEDEEELKKKPFGFSRSSNKAASKPLSRGATTVKSVESK--GQAEKCAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFSTAEEAARAYDAEARRIRGKKAKVNFPDEPSGAASSKRLKANPEAQPM--KKNLNS 201

[Close]

BLAST of GT627384 vs. TrEMBL
Match: Q52QY1_MANES (Ethylene response factor OS=Manihot esculenta PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.298e-45
Identity = 113/213 (53.05%), Postives = 125/213 (58.69%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNLRKNGLKKPFLLDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFAS--GNKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKRV----------KPNAETEMMLLN 697
            MCGGAIISDFIPATAA   SRR+TAD LWP+L+K   K    LDDDFEA F+                   ++  VK F F++       +R+ SRGS A K V  + N  AEK  KRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT              IRG KAKVNFP+E P AS KR           K NA   M  LN
Sbjct:    1 MCGGAIISDFIPATAAGRSSRRLTADFLWPDLKKPIGKIVGDLDDDFEADFQEFKDESDVDEEDD------VLFDVKPFSFSATASPPPRNRSPSRGSTAVKSV--EFNGLAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPDEAPRASPKRTMKANPQKPLPKRNATESMSYLN 205

[Close]

BLAST of GT627384 vs. TrEMBL
Match: Q8GTE5_CICAR (Transcription factor EREBP-like protein (Fragment) OS=Cicer arietinum GN=erebp PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.138e-44
Identity = 94/136 (69.12%), Postives = 102/136 (75.00%), Query Frame = 2

Query:  305 GLMLGVKGFGFASGNKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKRVKPNAETEMMLLNKNLNS 712
            GL++G KGF F+S N KS +TFSRGS AAK V+ K NEQAEK  KRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT              IRG KAKVNFPEE P  S+KR KPN E +  L+NKNLNS
Sbjct:   23 GLLVGGKGFTFSSNNTKSFKTFSRGSTAAKSVSPKSNEQAEKACKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPEEAPVTSSKRFKPNLENK--LVNKNLNS 156

[Close]

BLAST of GT627384 vs. TrEMBL
Match: D5L0Z5_MALDO (AP2 domain class transcription factor OS=Malus domestica GN=AP2D11 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.876e-43
Identity = 111/213 (52.11%), Postives = 123/213 (57.75%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNLRKNGLKKPFL---------LDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASGNKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKR-VKPNAETEMMLLNKN 703
            MCGGAIISDFI   A    SRR+TAD LWP+L+K    K F          LDDDFEA F+                    M+  K   F++G   S+R    GS A K V  + N QAEK  KRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT              IRG KAKVNFPEETP AS KR VK N++  +   N N
Sbjct:    1 MCGGAIISDFIAPAAR---SRRLTADYLWPDLKKPSSGKRFSKPLRSEIVDLDDDFEADFQEFKDESDVDEDDE-------MVDFKPSAFSAGKPSSAR----GSTAVKSV--EFNGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPEETPRASAKRSVKANSQKLIPKTNVN 197

[Close]

BLAST of GT627384 vs. TrEMBL
Match: Q3L0R1_GOSHI (Ethylene-responsive element binding protein ERF2 OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 2.001e-42
Identity = 107/213 (50.23%), Postives = 125/213 (58.69%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNLRKNGLKK--------PFL-LDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASGNKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKR-VKPNAETEMMLLNKN 703
            MCGGAIISDFIP +     SRR+TAD LWP+L+K+GLKK        P + L DDFE  F+                   ++  VK F F +  KK +   S GS + K +  + N QAEK  KRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT              IRG KAKVNFP ETP  S K  VK N++  +   N +
Sbjct:    1 MCGGAIISDFIPPSR----SRRLTADFLWPDLKKSGLKKGSGKRYSKPVIDLGDDFETDFQEFKDEESDIDDYDVDD---VLADVKPFAF-NATKKPASAVSHGSNSEKSM--QFNGQAEKCAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPNETPRTSPKHAVKTNSQKPLSKSNSS 203

[Close]

BLAST of GT627384 vs. TrEMBL
Match: D5L139_MALDO (AP2 domain class transcription factor OS=Malus domestica GN=AP2D55 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.413e-42
Identity = 111/215 (51.63%), Postives = 126/215 (58.60%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNLRKNG----LKKPFL-----LDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASGNKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKR-VKPNAETEMMLLNKNLN 709
            MCGGAIISDFI        SRR+TAD LWP+L+K      L KP       LDDDFEA F+                    M+  K   F++GN     +F+RGS A K V  + + QAEK  KRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNT              IRG KAKVNFPEETP AS KR +K N   + ++   NLN
Sbjct:    1 MCGGAIISDFIAPVR----SRRLTADYLWPDLKKPSSGKRLSKPLKSEIVDLDDDFEADFQEFKDESDVGEDDE-------MVDSKPSAFSAGNP----SFARGSTAVKSV--EFDGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPEETPCASAKRSIKEN--PQKLIAKTNLN 196

[Close]

BLAST of GT627384 vs. SwissProt
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.185e-37
Identity = 98/214 (45.79%), Postives = 117/214 (54.67%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNLRKN--GLKKP-------FLLDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASGNKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKR--VKPNAETEMMLLNKN 703
            MCGGAIISDFIP       SRRVT++ +WP+L+KN  G KK        F  D +FEA F+                   +   VK F F S  K +    + GS   K V   L+  AEK   RKRKNQYRGIRQRPWGKWAAEIRDPR+G R+WLGTF T              IRGSKAKVNFPEE   A++++  VK N +  +   N N
Sbjct:    1 MCGGAIISDFIPPPR----SRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFKDDSSIDCDDDFDVGD-VFADVKPFVFTSTPKPAVSAAAEGSVFGKKVTG-LDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQKPVAKPNPN 208

[Close]

BLAST of GT627384 vs. SwissProt
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.696e-36
Identity = 95/210 (45.24%), Postives = 113/210 (53.81%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNL---------RKNGLKKPFLLDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASGNKKSSRTFSR------GSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKRVKPNAET 679
            MCGGAIISDFIP   ++    RVT + +WP+L         R N     F LDDDFEA F+                   + + VK F F +  K  +  F        GS  AK       EQAEK +KRKRKNQYRGIRQRPWGKWAAEIRDPRKG R WLGTF+T              IRG+KAKVNFPEE   +   + +P+A+T
Sbjct:    1 MCGGAIISDFIPPPRSL----RVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFKDDSAFDCEDDDD----VFVNVKPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESA-EQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEEKNPSVVSQKRPSAKT 201

[Close]

BLAST of GT627384 vs. SwissProt
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.862e-28
Identity = 80/197 (40.61%), Postives = 95/197 (48.22%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNLRK----NGLKKPF-----LLDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASGNKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKR 658
            MCGGAII           GSRR T  +LWP  +K     G ++ F       D+DFEA F                     ++ +K   F     + + +    +G   P A        K  KRKRKNQ+RGIRQRPWGKWAAEIRDPRKGVRVWLGTFN+              IRG KAKVNFPE    A  +R
Sbjct:    1 MCGGAIIHHL---KGHPEGSRRATEGLLWPEKKKPRWGGGGRRHFGGFVEEDDEDFEADFEEFEVDSGDSDLELGEEDDDDVVEIKPAAFKRALSRDNLSTITTAGFDGPAA--------KSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFPEAPTTAQKRR 186

[Close]

BLAST of GT627384 vs. SwissProt
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.770e-25
Identity = 73/179 (40.78%), Postives = 86/179 (48.04%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNLRKNGLKKPFLLDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASGNKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPE 631
            MCGGAIISD+ P      G R++TA+ LW  L  +         DDF                               +GF S    +S+         K  A K  +  E   +RKRKN YRGIR+RPWGKWAAEIRDPRKGVRVWLGTFNT              IRG KAK+NFP+
Sbjct:    1 MCGGAIISDYAPLVTKAKG-RKLTAEELWSELDASAA-------DDF-------------------------------WGFYS----TSKLHPTNQVNVKEEAVKKEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPD 136

[Close]

BLAST of GT627384 vs. SwissProt
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.216e-20
Identity = 49/94 (52.13%), Postives = 59/94 (62.77%), Query Frame = 2

Query:  347 NKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFP 628
            +K  S     GS +++     ++   E++ KR+RKN YRGIRQRPWGKWAAEIRDP KGVRVWLGTF T              IRG KAK+NFP
Sbjct:   13 SKSESEPSQLGSVSSRKKRKPVSVSEERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFP 106

[Close]

BLAST of GT627384 vs. SwissProt
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.311e-18
Identity = 42/82 (51.22%), Postives = 54/82 (65.85%), Query Frame = 2

Query:  437 KRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKRVKPNAETE 682
            K+K+ ++Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNT              IRG+KAK+NFP E+      + K   + E
Sbjct:   18 KKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPNESSGKRKAKAKTVQQVE 99

[Close]

BLAST of GT627384 vs. SwissProt
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.324e-18
Identity = 42/90 (46.67%), Postives = 58/90 (64.44%), Query Frame = 2

Query:  365 TFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEE 634
            +F+R   +  P+   +++ A  E  R++K +YRG+RQRPWGKWAAEIRDP +  RVWLGTF+T               RG+KAK+NFPE+
Sbjct:   47 SFARVDSSHNPIEESMSK-AFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPED 135

[Close]

BLAST of GT627384 vs. SwissProt
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.633e-18
Identity = 43/90 (47.78%), Postives = 54/90 (60.00%), Query Frame = 2

Query:  404 SKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKRVKPNA 673
            S + ++ E     +R  +YRG+RQRPWGKWAAEIRDP K  RVWLGTF T               RGSKAK+NFPE   N  T+ ++ N+
Sbjct:   43 SAVTKECESSMSLERPKKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPE---NVGTQTIQRNS 129

[Close]

BLAST of GT627384 vs. SwissProt
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.803e-17
Identity = 41/84 (48.81%), Postives = 52/84 (61.90%), Query Frame = 2

Query:  392 KPVASKLNEQAE----KETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPE 631
            +P+ S +++Q+     +E    R+  YRG+RQRPWGKWAAEIRDP K  RVWLGTF+T               RG KAK+NFPE
Sbjct:   44 QPIPSSIDDQSSSLTLQEKSNSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPE 127

[Close]

BLAST of GT627384 vs. SwissProt
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.661e-17
Identity = 41/88 (46.59%), Postives = 54/88 (61.36%), Query Frame = 2

Query:  395 PVASKLN--EQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNAST 652
            PV  +L+  +Q + +  + R+  YRG+RQRPWGKWAAEIRDP+K  RVWLGTF T               +G+KAK+NFPE     +T
Sbjct:   16 PVKQELDKSDQHQPDQDQPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPTT 103

[Close]

BLAST of GT627384 vs. TAIR peptide
Match: AT3G14230.3 (| Symbols: RAP2.2 | related to AP2 2 | chr3:4737616-4739000 REVERSE LENGTH=374)

HSP 1 Score: 156.377 bits (394), Expect = 1.449e-38
Identity = 96/205 (46.83%), Postives = 114/205 (55.61%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNL---------RKNGLKKPFLLDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASGNKKSSRTF-SRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKRVKPNAET 679
            MCGGAIISDFIP   ++    RVT + +WP+L         R N     F LDDDFEA F+                   + + VK F F +  K  +  F S GS  AK       EQAEK +KRKRKNQYRGIRQRPWGKWAAEIRDPRKG R WLGTF+T              IRG+KAKVNFPEE   +   + +P+A+T
Sbjct:    1 MCGGAIISDFIPPPRSL----RVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFKDDSAFDCEDDDD----VFVNVKPFVFTATTKPVASAFVSTGSAYAKKTVESA-EQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEEKNPSVVSQKRPSAKT 196

[Close]

BLAST of GT627384 vs. TAIR peptide
Match: AT1G53910.2 (| Symbols: RAP2.12 | related to AP2 12 | chr1:20135242-20136581 FORWARD LENGTH=358)

HSP 1 Score: 155.221 bits (391), Expect = 3.229e-38
Identity = 98/214 (45.79%), Postives = 117/214 (54.67%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNLRKN--GLKKP-------FLLDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASGNKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKR--VKPNAETEMMLLNKN 703
            MCGGAIISDFIP       SRRVT++ +WP+L+KN  G KK        F  D +FEA F+                   +   VK F F S  K +    + GS   K V   L+  AEK   RKRKNQYRGIRQRPWGKWAAEIRDPR+G R+WLGTF T              IRGSKAKVNFPEE   A++++  VK N +  +   N N
Sbjct:    1 MCGGAIISDFIPPPR----SRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFKDDSSIDCDDDFDVGD-VFADVKPFVFTSTPKPAVSAAAEGSVFGKKVTG-LDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQKPVAKPNPN 208

[Close]

BLAST of GT627384 vs. TAIR peptide
Match: AT1G53910.1 (| Symbols: RAP2.12 | related to AP2 12 | chr1:20135242-20136581 FORWARD LENGTH=358)

HSP 1 Score: 155.221 bits (391), Expect = 3.229e-38
Identity = 98/214 (45.79%), Postives = 117/214 (54.67%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNLRKN--GLKKP-------FLLDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASGNKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKR--VKPNAETEMMLLNKN 703
            MCGGAIISDFIP       SRRVT++ +WP+L+KN  G KK        F  D +FEA F+                   +   VK F F S  K +    + GS   K V   L+  AEK   RKRKNQYRGIRQRPWGKWAAEIRDPR+G R+WLGTF T              IRGSKAKVNFPEE   A++++  VK N +  +   N N
Sbjct:    1 MCGGAIISDFIPPPR----SRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFKDDSSIDCDDDFDVGD-VFADVKPFVFTSTPKPAVSAAAEGSVFGKKVTG-LDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQKPVAKPNPN 208

[Close]

BLAST of GT627384 vs. TAIR peptide
Match: AT3G14230.2 (| Symbols: RAP2.2 | related to AP2 2 | chr3:4737616-4739000 REVERSE LENGTH=375)

HSP 1 Score: 154.066 bits (388), Expect = 7.192e-38
Identity = 95/206 (46.12%), Postives = 114/206 (55.34%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNL---------RKNGLKKPFLLDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASGNKKSSRTF--SRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKRVKPNAET 679
            MCGGAIISDFIP   ++    RVT + +WP+L         R N     F LDDDFEA F+                   + + VK F F +  K  +  F  + GS  AK       EQAEK +KRKRKNQYRGIRQRPWGKWAAEIRDPRKG R WLGTF+T              IRG+KAKVNFPEE   +   + +P+A+T
Sbjct:    1 MCGGAIISDFIPPPRSL----RVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFKDDSAFDCEDDDD----VFVNVKPFVFTATTKPVASAFVSTVGSAYAKKTVESA-EQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEEKNPSVVSQKRPSAKT 197

[Close]

BLAST of GT627384 vs. TAIR peptide
Match: AT3G14230.1 (| Symbols: RAP2.2 | related to AP2 2 | chr3:4737616-4739000 REVERSE LENGTH=379)

HSP 1 Score: 152.14 bits (383), Expect = 2.733e-37
Identity = 95/210 (45.24%), Postives = 113/210 (53.81%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNL---------RKNGLKKPFLLDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASGNKKSSRTFSR------GSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKRVKPNAET 679
            MCGGAIISDFIP   ++    RVT + +WP+L         R N     F LDDDFEA F+                   + + VK F F +  K  +  F        GS  AK       EQAEK +KRKRKNQYRGIRQRPWGKWAAEIRDPRKG R WLGTF+T              IRG+KAKVNFPEE   +   + +P+A+T
Sbjct:    1 MCGGAIISDFIPPPRSL----RVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFKDDSAFDCEDDDD----VFVNVKPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESA-EQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEEKNPSVVSQKRPSAKT 201

[Close]

BLAST of GT627384 vs. TAIR peptide
Match: AT1G53910.3 (| Symbols: RAP2.12 | related to AP2 12 | chr1:20135242-20136581 FORWARD LENGTH=356)

HSP 1 Score: 149.443 bits (376), Expect = 1.772e-36
Identity = 98/217 (45.16%), Postives = 117/217 (53.92%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNLRKN--GLKKP-------FLLDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASGNKKSSRTFSRGSGAAKPVASK---LNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKR--VKPNAETEMMLLNKN 703
            MCGGAIISDFIP       SRRVT++ +WP+L+KN  G KK        F  D +FEA F+                   +   VK F F S  K +       S AA+    K   L+  AEK   RKRKNQYRGIRQRPWGKWAAEIRDPR+G R+WLGTF T              IRGSKAKVNFPEE   A++++  VK N +  +   N N
Sbjct:    1 MCGGAIISDFIPPPR----SRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFKDDSSIDCDDDFDVGD-VFADVKPFVFTSTPKPAV------SAAAEVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQKPVAKPNPN 206

[Close]

BLAST of GT627384 vs. TAIR peptide
Match: AT3G16770.1 (| Symbols: RAP2.3, ATEBP, ERF72, EBP | ethylene-responsive element binding protein | chr3:5705784-5706768 FORWARD LENGTH=248)

HSP 1 Score: 114.775 bits (286), Expect = 4.836e-26
Identity = 73/179 (40.78%), Postives = 86/179 (48.04%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNLRKNGLKKPFLLDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASGNKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPE 631
            MCGGAIISD+ P      G R++TA+ LW  L  +         DDF                               +GF S    +S+         K  A K  +  E   +RKRKN YRGIR+RPWGKWAAEIRDPRKGVRVWLGTFNT              IRG KAK+NFP+
Sbjct:    1 MCGGAIISDYAPLVTKAKG-RKLTAEELWSELDASAA-------DDF-------------------------------WGFYS----TSKLHPTNQVNVKEEAVKKEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPD 136

[Close]

BLAST of GT627384 vs. TAIR peptide
Match: AT2G47520.1 (| Symbols: HRE2 | Integrase-type DNA-binding superfamily protein | chr2:19502891-19503490 REVERSE LENGTH=171)

HSP 1 Score: 100.138 bits (248), Expect = 1.233e-21
Identity = 49/94 (52.13%), Postives = 59/94 (62.77%), Query Frame = 2

Query:  347 NKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFP 628
            +K  S     GS +++     ++   E++ KR+RKN YRGIRQRPWGKWAAEIRDP KGVRVWLGTF T              IRG KAK+NFP
Sbjct:   13 SKSESEPSQLGSVSSRKKRKPVSVSEERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFP 106

[Close]

BLAST of GT627384 vs. TAIR peptide
Match: AT1G72360.2 (| Symbols: HRE1 | Integrase-type DNA-binding superfamily protein | chr1:27241904-27242777 FORWARD LENGTH=262)

HSP 1 Score: 93.2041 bits (230), Expect = 1.507e-19
Identity = 66/196 (33.67%), Postives = 91/196 (46.43%), Query Frame = 2

Query:   95 MCGGAIISDFIPATAAVGGSRRVTADILWPNLRKNGLKKPFLLDDDFEAGFRXXXXXXXXXXXXXXXXXXGLMLGVKGFGFASGNKKSSRTFSRGSGAAKPVASKLNEQAEKETKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKRVKPNAETE 682
            MCGGA+ISD+I        S + +    W   R NG+    + D  F+  F                         + F F+S +K  +      SG+A             + K+K+ ++Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNT              IRG+KAK+NFP E+      + K   + E
Sbjct:    1 MCGGAVISDYIAPEKIARSSGKSS----W---RSNGVFDCSIYD--FDGNFDELESD-------------------EPFVFSSTHKHHA------SGSAS------------DGKKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPNESSGKRKAKAKTVQQVE 150

[Close]

BLAST of GT627384 vs. TAIR peptide
Match: AT1G72360.3 (| Symbols: HRE1 | Integrase-type DNA-binding superfamily protein | chr1:27241904-27242777 FORWARD LENGTH=260)

HSP 1 Score: 92.0485 bits (227), Expect = 3.357e-19
Identity = 42/82 (51.22%), Postives = 54/82 (65.85%), Query Frame = 2

Query:  437 KRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXXXXXXXXXXIRGSKAKVNFPEETPNASTKRVKPNAETE 682
            K+K+ ++Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNT              IRG+KAK+NFP E+      + K   + E
Sbjct:   67 KKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPNESSGKRKAKAKTVQQVE 148

The following BLAST results are available for this feature:

BLAST of GT627384 vs. TrEMBL
BLAST of GT627384 vs. SwissProt
BLAST of GT627384 vs. TAIR peptide

BLAST of GT627384 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q2PEZ6_TRIPR	2.192e-73	70.53	Putative transcription factor EREBP OS=Trifolium p...	[more]
D2CPV3_VICFA	1.376e-67	72.63	Putative ethylene responsive factor OS=Vicia faba ...	[more]
A4UNV2_MEDFA	1.797e-67	66.83	Ethylene-responsive element binding protein OS=Med...	[more]
B6EBS4_9FABA	4.143e-64	65.05	Dehydration-responsive element binding protein OS=...	[more]
Q7XAU4_SOYBN	3.405e-50	59.13	Ethylene responsive protein OS=Glycine max GN=EREB...	[more]
Q52QY1_MANES	3.298e-45	53.05	Ethylene response factor OS=Manihot esculenta PE=2...	[more]
Q8GTE5_CICAR	2.138e-44	69.12	Transcription factor EREBP-like protein (Fragment)...	[more]
D5L0Z5_MALDO	6.876e-43	52.11	AP2 domain class transcription factor OS=Malus dom...	[more]
Q3L0R1_GOSHI	2.001e-42	50.23	Ethylene-responsive element binding protein ERF2 O...	[more]
D5L139_MALDO	3.413e-42	51.63	AP2 domain class transcription factor OS=Malus dom...	[more]

BLAST of GT627384 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RA212_ARATH	3.185e-37	45.79	Ethylene-responsive transcription factor RAP2-12 O...	[more]
RAP22_ARATH	2.696e-36	45.24	Ethylene-responsive transcription factor RAP2-2 OS...	[more]
ERF1_ORYSJ	7.862e-28	40.61	Ethylene-responsive transcription factor 1 OS=Oryz...	[more]
RAP23_ARATH	4.770e-25	40.78	Ethylene-responsive transcription factor RAP2-3 OS...	[more]
ERF71_ARATH	1.216e-20	52.13	Ethylene-responsive transcription factor ERF071 OS...	[more]
ERF73_ARATH	3.311e-18	51.22	Ethylene-responsive transcription factor ERF073 OS...	[more]
EF110_ARATH	4.324e-18	46.67	Ethylene-responsive transcription factor ERF110 OS...	[more]
RAP26_ARATH	9.633e-18	47.78	Ethylene-responsive transcription factor RAP2-6 OS...	[more]
EF112_ARATH	2.803e-17	48.81	Ethylene-responsive transcription factor ERF112 OS...	[more]
EF113_ARATH	3.661e-17	46.59	Ethylene-responsive transcription factor ERF113 OS...	[more]

BLAST of GT627384 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT3G14230.3	1.449e-38	46.83	\| Symbols: RAP2.2 \| related to AP2 2 \| chr3:473761...	[more]
AT1G53910.2	3.229e-38	45.79	\| Symbols: RAP2.12 \| related to AP2 12 \| chr1:2013...	[more]
AT1G53910.1	3.229e-38	45.79	\| Symbols: RAP2.12 \| related to AP2 12 \| chr1:2013...	[more]
AT3G14230.2	7.192e-38	46.12	\| Symbols: RAP2.2 \| related to AP2 2 \| chr3:473761...	[more]
AT3G14230.1	2.733e-37	45.24	\| Symbols: RAP2.2 \| related to AP2 2 \| chr3:473761...	[more]
AT1G53910.3	1.772e-36	45.16	\| Symbols: RAP2.12 \| related to AP2 12 \| chr1:2013...	[more]
AT3G16770.1	4.836e-26	40.78	\| Symbols: RAP2.3, ATEBP, ERF72, EBP \| ethylene-re...	[more]
AT2G47520.1	1.233e-21	52.13	\| Symbols: HRE2 \| Integrase-type DNA-binding super...	[more]
AT1G72360.2	1.507e-19	33.67	\| Symbols: HRE1 \| Integrase-type DNA-binding super...	[more]
AT1G72360.3	3.357e-19	51.22	\| Symbols: HRE1 \| Integrase-type DNA-binding super...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	Pathogenesis-related transcriptional factor/ERF, DNA-binding	PRINTS	PR00367	ETHRSPELEMNT	coord: 130..141 score: 4.5e-12coord: 152..168 score: 4.5
IPR001471	Pathogenesis-related transcriptional factor/ERF, DNA-binding	GENE3D	3.30.730.10	no description	coord: 129..188 score: 6.1
IPR001471	Pathogenesis-related transcriptional factor/ERF, DNA-binding	PFAM	PF00847	AP2	coord: 129..178 score: 5.2
IPR001471	Pathogenesis-related transcriptional factor/ERF, DNA-binding	SMART	SM00380	no description	coord: 129..192 score: 4.2
IPR001471	Pathogenesis-related transcriptional factor/ERF, DNA-binding	PROFILE	PS51032	AP2_ERF	coord: 129..186 score: 23
IPR016177	DNA-binding, integrase-type	SUPERFAMILY	54171	DNA-binding domain	coord: 128..189 score: 3
None	No IPR available	SEG	seg	seg	coord: 61..78 score: NAcoord: 162..175 score
None	No IPR available	SEG	seg	seg	coord: 6..13 score: NAcoord: 47..60 score
None	No IPR available	SEG	seg	seg	coord: 43..87 score
None	No IPR available	SEG	seg	seg	coord: 84..103 score
None	No IPR available	SEG	seg	seg	coord: 13..30 score
None	No IPR available	SEG	seg	seg	coord: 32..38 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT627384 ID=GT627384; Name=GT627384; organism=Lens culinaris; type=EST; length=714bp
CTTCATAGAAGAGATTCAATTGGGTAAAAGAAAGTTTTACTTTTTTTATA
GAGAGAAGCTAAAGATCTGAGAAGTAGTTAAAGGAGAGAGAAAGATGTGT
GGTGGTGCTATTATCTCCGACTTCATCCCAGCTACGGCGGCGGTGGGTGG
TTCCCGCCGTGTTACTGCTGATATCTTGTGGCCGAATTTGAGGAAAAACG
GGCTGAAGAAACCGTTTTTGCTTGACGATGATTTCGAGGCTGGGTTCAGA
GAGTTTAAGGATGATTCTGATTTTGATGCGGACGAGGATGAAGAGGAAGA
TGAAGGGTTGATGCTCGGTGTTAAAGGTTTTGGTTTTGCTTCAGGCAACA
AAAAATCTTCAAGAACCTTCTCTCGTGGATCGGGTGCTGCAAAGCCTGTG
GCATCGAAATTGAATGAGCAAGCTGAAAAGGAGACGAAGAGAAAGAGGAA
GAATCAGTATAGGGGTATCCGACAACGTCCGTGGGGAAAATGGGCAGCTG
AGATTCGTGACCCGAGGAAAGGCGTTCGTGTTTGGCTCGGAACATTCAAC
ACTGCGGAAGAGGCTGCGAGGGCTTATGATGCTGAAGCTAGGAGAATCCG
CGGATCGAAAGCCAAGGTGAATTTCCCTGAAGAGACTCCAAATGCTTCCA
CAAAACGTGTTAAGCCGAATGCTGAGACTGAGATGATGCTGTTGAATAAG
AATCTGAACTCGTT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	DNA-binding transcription factor activity
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Search form