GT627450

EST Overview
NameGT627450
Unique NameGT627450
TypeEST
OrganismLens culinaris (lentil)
Sequence length736
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology
BLAST of GT627450 vs. TrEMBL
Match: C6TEA6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.344e-17
Identity = 46/84 (54.76%), Postives = 57/84 (67.86%), Query Frame = 2
Query:  509 MSFVSLCVTLSLVFGFLILFIFAQIFYFLWWKKRRTHIDIEMEQGSFAKGVFYWGCWKKTSCSLDVTNTN--------RDIETS 736
            MSF  L + LSLVFG L+L + AQ++YFLWWKKRRT +DIEM+    AKGVFYWGCWK T C++     N        RDIE++
Sbjct:    1 MSFGGLSIALSLVFGCLLLALRAQLYYFLWWKKRRTQMDIEMD----AKGVFYWGCWKATPCAMMHGGNNTGRGGVNSRDIEST 80          
BLAST of GT627450 vs. TrEMBL
Match: A5AT40_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006045 PE=4 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 5.356e-9
Identity = 29/58 (50.00%), Postives = 41/58 (70.69%), Query Frame = 2
Query:  512 SFVSLCVTLSLVFGFLILFIFAQIFYFLWWKKRRTHIDIEMEQGSFAKGVFYWGCWKK 685
            SF  L + LSLVFG L+L + A+++Y LWWKKR T+ +IE +  + AK +FY  CWK+
Sbjct:    3 SFSGLGICLSLVFGCLLLALVAELYYLLWWKKRITNREIEYDYSNXAKELFYIFCWKR 60          
BLAST of GT627450 vs. TrEMBL
Match: B9HPI8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_558090 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 2.035e-8
Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 2
Query:  512 SFVSLCVTLSLVFGFLILFIFAQIFYFLWWKKRRTHIDIEMEQG---SFAKGVFYWGCWKKTS 691
            SF  L + L LVFG L+L I A+++Y LWWKKR ++ ++E + G   ++AKG F+  CWKK S
Sbjct:    3 SFSELGIGLGLVFGCLLLAIVAELYYLLWWKKRISNREVEEDDGYSSNYAKGFFHLICWKKPS 65          
BLAST of GT627450 vs. TrEMBL
Match: B9GJP8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_549186 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.010e-7
Identity = 31/64 (48.44%), Postives = 41/64 (64.06%), Query Frame = 2
Query:  509 MSFVSLCVTLSLVFGFLILFIFAQIFYFLWWKKRRTHIDIEME---QGSFAKGVFYWGCWKKTS 691
            +SF  L + LSLVFG  +L + A++FY LWWKKR T+  +E E     S+AK  F+  CWKK S
Sbjct:    2 VSFSGLGLGLSLVFGCFLLALVAELFYLLWWKKRVTNRKVEEEDDYSSSYAKEFFHLICWKKAS 65          
The following BLAST results are available for this feature:
BLAST of GT627450 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
C6TEA6_SOYBN5.344e-1754.76Putative uncharacterized protein OS=Glycine max PE... [more]
A5AT40_VITVI5.356e-950.00Putative uncharacterized protein OS=Vitis vinifera... [more]
B9HPI8_POPTR2.035e-847.62Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GJP8_POPTR1.010e-748.44Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT627450 ID=GT627450; Name=GT627450; organism=Lens culinaris; type=EST; length=736bp
CTCTTTTTAACCTATCCTTTTTCCATCAAAATATAATTAATTTCTTTTCC
TTAGATAGTGATACTTACTTTATTATGTTTATAAATTTTGTGGCTCTATC
TTCTGGGTTTCCTCGTTTTCATAACAAATTGTCAATTCACACAACTCATA
AGTCATGGCTTCTACTTGTAAGGTAAGACTTTCCCTTTAGAAGACAAATC
CCTATTCATTAAGATAGGTCTTGAAAAGTAGTACCAATAGCTACAAACAT
AAGTTTCAAGATATAGAAGAAATTCATTCATTCATTCATTCACCTTTGTC
CTTCATTTGAAGAAGCTGCATGGTCCATCCTTTTGTGGTTTTGATTTTAG
CTTACTCCTAGGTACAAAGATTTGTTGTCGGATATCAGTTCATTTACTTC
CTTAATAACTCCGAATTTTTTCATAGCCTTCAATTTTGCTTGATATTTTA
TTGTTATTTTTGTATATTTGTTAGAATGAAGATGTGAAATTTTCATTAAA
AAAAGACCATGTCTTTTGTTAGTTTATGTGTTACCTTAAGCCTTGTTTTT
GGGTTCCTTATACTCTTCATATTTGCACAAATTTTCTATTTTTTATGGTG
GAAAAAGAGAAGAACACACATAGATATTGAAATGGAACAAGGTAGTTTTG
CAAAAGGGGTGTTTTATTGGGGTTGTTGGAAGAAAACATCATGTTCTTTA
GATGTTACAAACACTAATAGAGACATAGAAACCTCA
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