GT624416
EST Overview
Unigenes
This EST is part of the following unigenes:
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT624416 vs. TrEMBL
Match: D7TDP8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_158.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00001473001 PE=4 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.668e-19 Identity = 93/294 (31.63%), Postives = 141/294 (47.96%), Query Frame = 3 Query: 6 SLKELSISKCHGIKIFGND-------STNVPFKFLEVLRFENMKNWKEWLCME-GFPRLKELSIIDCPKLKRALPQHLPSLQKLVINGCPKLKRALPQHLPSLQKLVITYCE--------------MLDV----SVPNG----NNIIDLDIQSCRRILINELSPSLKAFVLERNQYVEFSMDHLINC------PFLERLVLDIQCCGRILINELSPSLKEFVLRGNQYVEFSMDHLINCPFLEALELDLKDTVECPSLDLCCYNSLSRLTITGWKFSSLPFSLHLFTHLKSLDL 779 SLKELSI + G++ G + S+ PF+ LE+LRFE M W+EW+C E FP LKEL I CPKLK+ LP+HLP L KL I C +L LP PS+++L++ C+ LD+ +P+ N+++ L + C + E+ P L ++ + + D L++C P LERL + I C + SL E +++ N ++ I+C + LEL L + + Y L++L I S F L FT L+ L + Sbjct: 159 SLKELSIMRIDGVQKVGQEFCGNIGSSSFKPFEALEILRFEKMLEWEEWVCREIEFPCLKELCIKICPKLKKDLPKHLPKLTKLEIRECKQLVCCLPM-APSIRELMLVECDDVVVRSAGSLTSLASLDIRNVCKIPDELGQLNSLVKLSVSGCPE--LKEMPPILHNLTSLKHLDIRY-CDSLLSCSEMGLPPMLERLQI-IHC-------PILKSLSEGMIQNNTTLQ---QLYISC--CKKLELSLPEDMTHNH-----YAFLTQLNIFEICDSLTSFPLAFFTKLEYLHI 430
BLAST of GT624416 vs. TrEMBL
Match: D7SQ26_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_143.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000871001 PE=4 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.668e-19 Identity = 92/273 (33.70%), Postives = 131/273 (47.99%), Query Frame = 3 Query: 6 SLKELSISKCHGIKIFGND-------STNVPFKFLEVLRFENMKNWKEWLCME-GFPRLKELSIIDCPKLKRALPQHLPSLQKLVINGCPKLK-RALPQHLPSLQKLVITYCEML----DVSVPNGNNIIDLDIQSCRRILINELSPSLKAFVLERNQYVEFSMDHLINCPFLERLVLDIQCCG--RILINELSPSLKEFVLRGNQYVEFSMDHLINCPFLEALEL-DLKDTVECPSLDLCCYNSLSRLTITGWKFSSLPFSLH-LFTHLKSL 773 SLK LSI + G++ G + S+ PF LE+LRFE M W+EW+C FP LK+L I CPKLK+ LP+HLP L L I C +L+ + +L SL+ L I YCE L ++++P + L I SC + SL +++ N ++ L+I CCG R L ++ SLK + G+ + + HL NC LE+L + D V+ SL C K SLP +H L T L+ L Sbjct: 616 SLKVLSIMRIDGVQKVGQEFYGNIGSSSFKPFGSLEILRFEEMLEWEEWVCRGVEFPCLKQLYIEKCPKLKKDLPEHLPKLTTLQIRECQQLEIPPILHNLTSLKNLNIRYCESLASFPEMALP--PMLERLRIWSC------PILESLPEGMMQNNTTLQ---------------CLEICCCGSLRSLPRDID-SLKTLSISGSSFTKLEKLHLWNCTNLESLSIRDGLHHVDLTSLRNC------------KKLKSLPQGMHTLLTSLQDL 852
BLAST of GT624416 vs. TrEMBL
Match: D7UBS8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_74.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00034675001 PE=4 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.179e-19 Identity = 92/289 (31.83%), Postives = 133/289 (46.02%), Query Frame = 3 Query: 3 TSLKELSIS-----KCHGIKIFGNDSTNV-PFKFLEVLRFENMKNWKEWLCMEGFPRLKELSIIDCPKLKRALPQHLPSLQKLVINGCPKLKRALP-QHLP-SLQKLVITYC---EMLDVSVPNGNNIIDLDIQSCRRIL-INELSPSLKAFVLERNQYVEFSMDHLINCPFLERLV------LDIQCCGRILINELSPSLKEFVLRGNQYVEFSMDHLINCPFLEALELDLKD--------TVECPSLDLCCYNSLSRLTITGW-------KFSSLPFSLHLFTHLKS 770 +SLK+L + K GI+ +G S V PF LE LRFE+M W+EW E +PRL+EL I CPKL + LP HLPSL KL I CPKL LP Q LP +L+ L I C E L + + + ++ +L IQ C ++ + E+ LE L +C LE L+ L+I+ C ++ E + G M H+ +C L++L L ++ +CP+L LS + W K + LH T L++ Sbjct: 496 SSLKKLCVKGMQGVKSVGIEFYGEPSLCVKPFPSLEFLRFEDMPEWEEWCSSESYPRLRELEIHHCPKLIQKLPSHLPSLVKLDIIDCPKLVAPLPNQPLPCNLEYLEINKCASLEKLPIGLQSLTSLRELSIQKCPKLCSLAEMDFPPMLISLE-----------LYDCEGLEGLLPSTMKRLEIRNCKQL----------ESISLGFSSPNLKMLHIDDCKNLKSLPLQMQSFTSLRDLRIYDCPNLVSFAEEGLSLNLTSFWIRNCKNLKMPLYQWGLHGLTSLQT 763
BLAST of GT624416 vs. TrEMBL
Match: A5B7H6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040806 PE=4 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.561e-17 Identity = 72/223 (32.29%), Postives = 114/223 (51.12%), Query Frame = 3 Query: 3 TSLKELSISKCHGIKIFGND-STNVPFKFLEVLRFENMKNWKEWLCMEGFPRLKELSIIDCPKLKRALPQHLPSLQKLVINGCPKLKRALPQHLPSLQKLVITYCEMLDVSVPNGNNIIDLDIQSCRRILINELSPSLKAFVLERNQYVE--FSMDHLINCPFLERLVLDIQ---CCGRILINE--LSPSLKEFVLRGNQYVEFSMDHLINC--PFLEALELD 641 T LK L IS + ++ G++ N F+ LE L FE+M NW++WLC FPRL++LSI +CPKL LP+ LPSL++LVI CP+L A P++++L + L + +P+ D I I+++S + V + SM+ L+ L+ + D++ CC +N+ L +LK + V+ + L C P LE L +D Sbjct: 830 THLKYLQISGMNEVECVGSEFHGNASFQSLETLSFEDMLNWEKWLCCGEFPRLQKLSIQECPKLTGKLPEQLPSLEELVIVECPQLLMA-SLTAPAIRELRMVDFGKLQLQMPS----CDFTALQTSEIEISDVSQWRQLPVAPHQLSIIKCDSMESLLEEEILQSNIYDLKIYYCCFSRSLNKVGLPATLKSLSISNCTKVDLLLPELFGCHLPVLERLSID 1047
BLAST of GT624416 vs. TrEMBL
Match: D7T2T4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031998001 PE=4 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.663e-17 Identity = 68/188 (36.17%), Postives = 98/188 (52.13%), Query Frame = 3 Query: 6 SLKELSISKCHGIKI---FGNDST--NVPFKFLEVLRFENMKNWKEWLCMEGFPRLKELSIIDCPKLKRALPQHLPSLQKLVINGCPKLKRA--LPQHLPSLQKLVITYCEMLDVSVPN---GNNIIDLDIQSC---RRILINELSPSLKAFVLERNQYVEFSMD----------HLINCPFLERLVL 500 +LK+LSI+ G + G+ S N F+ LE L FE+M NW++WLC FPRL++LSI +CPKL LP+ LPSL++LVI CP+L A + L+ L I C+ ++ + +NI DL I C R + L +LK+ + + S+ HL NCP LE + L Sbjct: 595 NLKQLSITNYPGARFPNWLGDSSFHGNASFQSLETLSFEDMLNWEKWLCCGEFPRLQKLSIQECPKLTGKLPEQLPSLEELVIVECPQLLMASLTAPAIRELRMLSIIKCDSMESLLEEEILQSNIYDLKIYYCCFSRSLNKVGLPATLKSLSISNCTKLSISISEGDPTSLCSLHLWNCPNLETIEL 782
BLAST of GT624416 vs. TrEMBL
Match: D7T5M1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_221.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00004013001 PE=4 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.478e-17 Identity = 74/229 (32.31%), Postives = 119/229 (51.97%), Query Frame = 3 Query: 3 TSLKELSISKCHGIKIFGNDST-NVPFKFLEVLRFENMKNWKEWLCMEGFPRLKELSIIDCPKLKRALPQHLPSLQKLVINGCPKLKRALPQHLPSLQKLVITYCEMLDVSVPNGNNIIDLDIQSCRRILINELSPSLKAFVLERNQYVEFSMDHLINCPFLERL-VLDIQCCGRILINELSPSLKEFVLRGNQYVEFSMDHLINC--PFLEALELDLKDTVECPSLDL 677 T LK L IS+ +G++ G++ N F+FLE L FE+M+NW++WLC FPRL++L I CPKL LP+ L SL +L I+ CP+L A +P++++L + C+ + + I+D S + ++LS + + YVE ++ I+ + L + D + L +LK ++ +E + L C P LE+LE +KD V SL L Sbjct: 498 TQLKYLQISRMNGVECVGDEFYGNASFQFLETLSFEDMQNWEKWLCCGEFPRLQKLFIRKCPKLTGKLPEQLLSLVELQIHECPQLLMA-SLKVPAIRQLQMPGCDFTALQT-SEIEILDASQWSQLPMAPHQLS-------IRKCDYVESLLEEEISQTNIHDLKIYDCSFSRSLHKVGLPTTLKSLLISKCSKLEILVPELFRCHLPVLESLE--IKDGVIDDSLSL 715
BLAST of GT624416 vs. TrEMBL
Match: D7T385_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032199001 PE=4 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.933e-17 Identity = 52/109 (47.71%), Postives = 63/109 (57.80%), Query Frame = 3 Query: 9 LKELSISKCHGIKIFGNDSTNV------PFKFLEVLRFENMKNWKEWL-CMEGFPRLKELSIIDCPKLKRALPQHLPSLQKLVINGCPKLKRALPQHLPSLQKLVITYC 314 LK L I G++ G + PF+ LE L FENMK WKEW E F RL +L I DCP+L + LP HL SL +L IN CP+ LP HLPSL++L I YC Sbjct: 392 LKRLFIEGMDGVRRVGLEFEGQVSLYAKPFQCLESLCFENMKEWKEWSWSRESFSRLLQLEIKDCPRLSKKLPTHLTSLVRLEINNCPETMVPLPTHLPSLKELNIYYC 500
BLAST of GT624416 vs. TrEMBL
Match: D7SZW0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_34.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022892001 PE=4 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 7.748e-17 Identity = 78/250 (31.20%), Postives = 119/250 (47.60%), Query Frame = 3 Query: 6 SLKELSISKCHGIK-----IFGNDSTNV-PFKFLEVLRFENMKNWKEWLCMEG----FPRLKELSIIDCPKLKRALPQHLPSLQKLVINGCPKLKRALPQHLPSLQKLVITYC--EMLDVSVPNGNNIIDLDIQSCRRILINELSPSLKAFVLERNQYVEFSMDHLINC-PFLERLVLDIQCCGRIL-INELSPSLKEFVLRGNQYVEFSMDHLINC--PFLEALELDLKDTVECPSLDLCCYNSLSRLT 707 SL+ L I +G++ +GND PF LE LRFE++ WKEWL G FPRL+E I +CPKL LP LPSL KL I GC +L +LP+ P+++KL + C + + ++ L + + + EL P L+ + + VE ++ ++ L+ L + R L L +LK + ++ +EF + + C PFLE L + C SL + RLT Sbjct: 177 SLQVLDIRGMNGVERVGSEFYGNDYLPAKPFTSLETLRFEDLPEWKEWLSFRGEGGEFPRLQEFYIKNCPKLTGDLPIQLPSLIKLEIEGCNQLLVSLPR-FPAVRKLKMLKCGNVLSQIQYSGFTSLESLVVSDISQ--LKELPPGLRWLSINNCESVESPLERMLQSNTHLQYLEIKHCSFSRFLQRGGLPTTLKSLSIYNSKKLEFLLREFLKCHHPFLERLSIH----GTCNSLSSFSFGFFPRLT 419
BLAST of GT624416 vs. TrEMBL
Match: A5AGF6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024559 PE=4 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.322e-16 Identity = 76/250 (30.40%), Postives = 123/250 (49.20%), Query Frame = 3 Query: 3 TSLKELSISKCHGIKIFGNDST-NVPFKFLEVLRFENMKNWKEWLCMEGFPRLKELSIIDCPKLKRALPQHLPSLQKLVINGCPKLKRALPQHLPSLQKLVITYCEMLDVSVPNGNNIIDLDIQSCRRILINELSPSLKA---FVLERNQYVEFSMDHLINCPFLERL-VLDIQCCGRILINELSPSLKEFVLRGNQYVEFSMDHLINC--PFLEALELD---LKDTVECPSLDLCCYNSLSRLTITGWK 722 T LK L IS+ +G++ G++ N F+FLE L FE+M+NW++WLC FPRL++L I CPKL LP+ L SL +L I+GCP+L A +P++ +L + L + +P G + L + +++ S A + Y E ++ I+ ++ L + D + L +LK + +E + L C P LE LE+ + D++ S L + L+ TI G K Sbjct: 712 TQLKYLQISRMNGVECVGDEFYGNASFQFLETLSFEDMQNWEKWLCCGEFPRLQKLFIRKCPKLTGKLPELLLSLVELQIDGCPQLLMA-SLTVPAISQLRMVDFGKLQLQMP-GCDFTALQTSEIEILDVSQWSQLPMAPHQLSIRECDYAESLLEEEISQTNIDDLKIYDCSFSRSLHKVGLPTTLKSLFISECSKLEILVPELFRCHLPVLERLEIKGGVINDSLTL-SFSLGIFPKLTHFTIDGLK 958
BLAST of GT624416 vs. TrEMBL
Match: D7T389_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032204001 PE=4 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.726e-16 Identity = 54/142 (38.03%), Postives = 74/142 (52.11%), Query Frame = 3 Query: 9 LKELSISKCHGIKIFGNDSTNV------PFKFLEVLRFENMKNWKEWL-CMEGFPRLKELSIIDCPKLKRALPQHLPSLQKLVINGCPKLKRALPQHLPSLQKLVITYCEMLDVS--------VPNGNNIIDLDIQSCRRIL 389 LK+L I + +K G + PF+ LE L F MK WK+W E F RL +L I DCP+L + LP HL SL +L IN CP+ LP HLPSL++L I YC + S + G N+ L + C +++ Sbjct: 393 LKKLVIERMDRVKSVGLEFEGQVSPYAKPFQCLEYLSFREMKKWKKWSWSRESFSRLVQLQIKDCPRLSKKLPTHLTSLVRLEINNCPETMVPLPTHLPSLKELNICYCLEMKPSKRLQPFGRLRGGKNLAKLRVLDCNQLV 534
BLAST of GT624416 vs. SwissProt
Match: R13L1_ARATH (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.969e-11 Identity = 53/153 (34.64%), Postives = 74/153 (48.37%), Query Frame = 3 Query: 9 LKELSISKCHGIKIFGN----------DSTNVPFKFLEVLRFENMKNWKEWLCM-----EGFPRLKELSIIDCPKLKRALPQHLPSLQKLVINGCPKLKRALPQHLPSLQKL----VITYCEMLDVSVPNGN--NIIDLDIQSCRRILINELS 404 LKEL IS G++ G D PF+ LE LRF+N+ +W+EWL + + FP LK+L I+ CP+L LP LPSL L I C L H S + L + + C+ L V P + N+ L++ C + ELS Sbjct: 815 LKELHISGMVGLQSIGRKFYFSDQQLRDQDQQPFRSLETLRFDNLPDWQEWLDVRVTRGDLFPSLKKLFILRCPELTGTLPTFLPSLISLHIYKCGLLDFQPDHHEYSYRNLQTLSIKSSCDTL-VKFPLNHFANLDKLEVDQCTSLYSLELS 966
BLAST of GT624416 vs. SwissProt
Match: DRL21_ARATH (Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 1.737e-10 Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = 3 Query: 6 SLKELSISKCHGIKIFG-------NDSTNVPFKFLEVLRFENMKNWKEWLCME----GFPRLKELSIIDCPKLKRALPQHLPSLQKLVINGCP 251 SLK LSI K + ++ G N+S VPF+ L++L+F M W EW+C E FP L++L I CP L++ P+ LPS ++ I+ CP Sbjct: 808 SLKYLSIEKFNILQKVGLDFFFGENNSRGVPFQSLQILKFYGMPRWDEWICPELEDGIFPCLQKLIIQRCPSLRKKFPEGLPSSTEVTISDCP 900
BLAST of GT624416 vs. TAIR peptide
Match: AT3G14470.1 (| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054) HSP 1 Score: 68.1662 bits (165), Expect = 5.950e-12 Identity = 53/153 (34.64%), Postives = 74/153 (48.37%), Query Frame = 3 Query: 9 LKELSISKCHGIKIFGN----------DSTNVPFKFLEVLRFENMKNWKEWLCM-----EGFPRLKELSIIDCPKLKRALPQHLPSLQKLVINGCPKLKRALPQHLPSLQKL----VITYCEMLDVSVPNGN--NIIDLDIQSCRRILINELS 404 LKEL IS G++ G D PF+ LE LRF+N+ +W+EWL + + FP LK+L I+ CP+L LP LPSL L I C L H S + L + + C+ L V P + N+ L++ C + ELS Sbjct: 815 LKELHISGMVGLQSIGRKFYFSDQQLRDQDQQPFRSLETLRFDNLPDWQEWLDVRVTRGDLFPSLKKLFILRCPELTGTLPTFLPSLISLHIYKCGLLDFQPDHHEYSYRNLQTLSIKSSCDTL-VKFPLNHFANLDKLEVDQCTSLYSLELS 966
BLAST of GT624416 vs. TAIR peptide
Match: AT3G14460.1 (| Symbols: | LRR and NB-ARC domains-containing disease resistance protein | chr3:4851990-4856264 REVERSE LENGTH=1424) HSP 1 Score: 66.6254 bits (161), Expect = 1.731e-11 Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = 3 Query: 6 SLKELSISKCHGIKIFG-------NDSTNVPFKFLEVLRFENMKNWKEWLCME----GFPRLKELSIIDCPKLKRALPQHLPSLQKLVINGCP 251 SLK LSI K + ++ G N+S VPF+ L++L+F M W EW+C E FP L++L I CP L++ P+ LPS ++ I+ CP Sbjct: 808 SLKYLSIEKFNILQKVGLDFFFGENNSRGVPFQSLQILKFYGMPRWDEWICPELEDGIFPCLQKLIIQRCPSLRKKFPEGLPSSTEVTISDCP 900 The following BLAST results are available for this feature:
BLAST of GT624416 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT624416 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 2
BLAST of GT624416 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT624416 ID=GT624416; Name=GT624416; organism=Lens culinaris; type=EST; length=781bpback to top |