GT625763

EST Overview
NameGT625763
Unique NameGT625763
TypeEST
OrganismLens culinaris (lentil)
Sequence length804
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT625763 vs. TrEMBL
Match: Q84ZV5_SOYBN (Polyprotein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.997e-55
Identity = 120/267 (44.94%), Postives = 160/267 (59.93%), Query Frame = 1
Query:   40 FQIRNVKLDSPRFDGSDMLQWIFKAEQFFKYYNTPDVHHLI-AAMHMEKEVVPRFQMLSRNHPFQSW--------LEFGPSPYESARASLFKLQHTTAVSEYYLKFTALANRSQGVSAEALLDYFISGLKPDIRRDVIAQTPINVPKAFSLVKLFEEKYNRKLK-----------SPSPTATSKFTPTNXXXXXXXXXXXXXXXXXXXXXXXXXXRTSQFKRMSLAEAQLRQARGLCYTFDKKISINHKCPNRTYLLSTSEESDAEE 780
            FQ+R+VKLD PRFDG +++ WIFKAEQFF YY TPD   LI A++H++++VVP +QML +  PF SW        L+FGPS Y+  RA+LFKL  +  V+EYY++FTAL NR  G+SAEA+LD F+SGL+ +I RDV A  P  + KA +L KLFEEKY    K           + + +AT K+ PTN                          R    K++S AE QLR+ + LCY  D+K S  HKCPNR  +L   EE+D ++
Sbjct:   93 FQVRSVKLDFPRFDGKNVMDWIFKAEQFFDYYATPDADRLIIASVHLDQDVVPWYQMLQKTEPFSSWQAFTRALELDFGPSAYDCPRATLFKLNQSATVNEYYMQFTALVNRVDGLSAEAILDCFVSGLQEEISRDVKAMEPRTLTKAVALAKLFEEKYTSPPKTKTFSNLARNFTSNTSATQKYPPTN--QKNDNPKPNLPPLLPTPSTKPFNLRNQNIKKISPAEIQLRREKNLCYFCDEKFSPAHKCPNRQVMLLQLEETDEDQ 357          
BLAST of GT625763 vs. TrEMBL
Match: A5ADJ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017554 PE=4 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 7.400e-26
Identity = 81/263 (30.80%), Postives = 125/263 (47.53%), Query Frame = 1
Query:   43 QIRNVKLDSPRFDGSDMLQWIFKAEQFFKYYNTPDVHH-LIAAMHMEKEVVPRFQMLSRNHPFQSW--------LEFGPSPYESARASLFKLQHTTAVSEYYLKFTALANRSQGVSAEALLDYFISGLKPDIRRDVIAQTPINVPKAFSLVKLFEEKYNRKLKSPSPTATSKFTPTNXXXXXXXXXXXXXXXXXXXXXXXXXXRTSQFKRMSLAEAQLRQARGLCYTFDKKISINHKCPNRTYLLSTSEESDAEEVPVVESTE 804
            Q R V+LD P+F+G D   W+++A+QFF Y+ T   H  L+A+ HME + +  FQ +       SW          FG SPYE+   +L +L+ T+ V +Y  +F AL+N+ +G++    L  F+SGL+ DIR  V    P N+  AF L K+ EE     + +   TA     PT                                +R+S ++ + R+ +GLCY  D K +  HKC +    +   +ES  ++VP  E  E
Sbjct:   50 QTRAVRLDFPKFNGEDPSGWVYRADQFFNYHQTNPHHRVLLASFHMEGKALVWFQDIEAAGGISSWEGFVRALQTRFGSSPYENPMEALIRLKQTSTVEDYKSQFEALSNQLRGLAESYKLSCFLSGLREDIRFMVCMLNPSNLHIAFGLAKMQEE----NVAALRRTAKLGSVPTRLAIGPPSPPEKRVIV--------------PVQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSARLFIMECDESSDDKVPKSEVAE 294          
BLAST of GT625763 vs. TrEMBL
Match: A5BEK1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026680 PE=4 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.812e-25
Identity = 81/263 (30.80%), Postives = 124/263 (47.15%), Query Frame = 1
Query:   43 QIRNVKLDSPRFDGSDMLQWIFKAEQFFKYYNTPDVHH-LIAAMHMEKEVVPRFQMLSRNHPFQSW--------LEFGPSPYESARASLFKLQHTTAVSEYYLKFTALANRSQGVSAEALLDYFISGLKPDIRRDVIAQTPINVPKAFSLVKLFEEKYNRKLKSPSPTATSKFTPTNXXXXXXXXXXXXXXXXXXXXXXXXXXRTSQFKRMSLAEAQLRQARGLCYTFDKKISINHKCPNRTYLLSTSEESDAEEVPVVESTE 804
            Q R V+LD P+F+G D   W+++A+QFF Y+ T   H  L+A+ HME + +  FQ +       SW          FG SPYE    +L +L+ T+ V +Y  +F AL+N+ +G++    L  F+SGL+ +IR  V    P N+  AF L K+ EE     + +   TA     PT                                +R+S ++ + R+ +GLCY  D K +  HKC +    +   +ES  +EVP  E  E
Sbjct:   85 QTRAVRLDFPKFNGEDPNGWVYRADQFFNYHQTNPHHRVLLASFHMEGKALVWFQDIEAAGGISSWEGFVRALQTRFGSSPYEDPMEALIRLKQTSTVEDYKSQFEALSNQLRGLAESYKLSCFLSGLRENIRFMVRMLNPSNLHIAFGLAKMQEE----NVAALRRTAKLGSVPTRLAIGPPSPPEKRAIV--------------PVQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSARLFIMECDESSDDEVPKSEVAE 329          
BLAST of GT625763 vs. TrEMBL
Match: A5X2S4_9ERIC (Polyprotein OS=Primula vulgaris PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.964e-22
Identity = 76/261 (29.12%), Postives = 120/261 (45.98%), Query Frame = 1
Query:   46 IRNVKLDSPRFDGSDMLQWIFKAEQFFKYYNTPDVHHL-IAAMHMEKEVVPRFQMLSRNHPFQSW--------LEFGPSPYESARASLFKLQHTTAVSEYYLKFTALANRSQGVSAEALLDYFISGLKPDIRRDVIAQTPINVPKAFSLVKLFEEKYN-------RKLKSPSPTATSKFTPTNXXXXXXXXXXXXXXXXXXXXXXXXXXRTSQFKRMSLAEAQLRQARGLCYTFDKKISINHKCPN-RTYLLSTSEESDAE 777
            +R ++LD P+F G ++++W++KA QFF  Y TP+   + IA +H E + +  +Q L ++    SW          FG +  E+    L KL+   +V EY   F  ++NR + +S E  L YFI GLK +I   V    P ++  AFS+ K  EEK +       R  +S +P   + F+ TN                          +    KR++  E   R+ + LCY  D+K    H C   + +LL   EE + E
Sbjct:   17 LRTIRLDFPKFYGENVVEWVYKANQFFSLYQTPETQRIKIANLHFEGQPLVWYQNLEKSDLISSWDNLCDQMTKRFGENLNENPLDQLIKLKQRNSVKEYKSDFEIISNRVKDLSEEHKLTYFICGLKEEIGLTVKMLFPKSIETAFSIAKYQEEKLHLEKKPNFRTFQSQAPNNQATFSKTN--------------------NTTAITKLPPIKRLTQDELTDRRQKNLCYNCDEKWFRGHVCVKPKIFLLQNVEEFENE 257          
BLAST of GT625763 vs. TrEMBL
Match: A5C5K2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039388 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.886e-21
Identity = 71/257 (27.63%), Postives = 123/257 (47.86%), Query Frame = 1
Query:   49 RNVKLDSPRFDGSDMLQWIFKAEQFFKYYN-TPDVHHLIAAMHMEKEVVPRFQMLSRNHPFQSW--------LEFGPSPYESARASLFKLQHTTAVSEYYLKFTALANRSQGVSAEALLDYFISGLKPDIRRDVIAQTPINVPKAFSLVKLFEEKYNRKLKSPSPTATSKFTPTN--XXXXXXXXXXXXXXXXXXXXXXXXXXRTSQFKRMSLAEAQLRQARGLCYTFDKKISINHKCPN-RTYLLSTSEESDAEEV 783
            +++KL  P+F+G D   WI+KAEQ+F + N TP     +A+ H+E   +   + L++     +W        L FGP+ YE    +L +L+ TT V+ Y   F  L++R  G+    L+  FI+GL+ +IR DV  + P  +     + +L EE+   + K   PT  ++F P +                            + + F R++  EA+ R+ +GLCY  D+K    H+C   + +++  S   + E+V
Sbjct:   81 QHLKLSFPKFNGDDPTGWIYKAEQYFDFMNITPGQQVQLASFHLEGIALQWHRWLTKFRGPLTWDEFTKAVQLRFGPTDYEDPSEALTRLKQTTTVAAYQEAFEKLSHRVDGLPENFLIGCFIAGLQDEIRIDVKIKQPRTLADTIGVARLIEERNQLQRK---PTQQTRFQPASVTPKASPNPTAGVLGPPPTQHMNQSSNAQPATFHRITNQEARERREKGLCYYCDEKFVAGHRCERPQLFMIEDSPHMNTEDV 334          
BLAST of GT625763 vs. TrEMBL
Match: B9NDF1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_592552 PE=4 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.597e-20
Identity = 69/274 (25.18%), Postives = 124/274 (45.26%), Query Frame = 1
Query:   40 FQIRNVKLDSPRFDGSDMLQWIFKAEQFFKYYNTPDVHHL-IAAMHMEKEVVPRFQMLSRNHPFQS------------WLEFGPSPYESARASLFKLQHTTAVSEYYLKFTALANRSQGVSAEALLDYFISGLKPDIRRDVIAQTPINVPKAFSLVKLFEEKYNRKLKSPSP-----TATSKFTPTNXXXXXXXXXXXXXXXXXXXXXXXXXXRTSQFKRMSLAEAQLRQARGLCYTFDKKISINHKCPN-RTYLLSTSEESDAEEVPVVESTE 804
            F  +  KL+ P + G+D  +W  + +QFF+Y  T +   + +A+ H++ E    +Q L R +  +             W  FGP   E    +L +++   ++ EY  +F  L NR QG + +AL+  F+ GLKPDI   ++   P ++ +A SL ++ +E+  R+ ++  P        + F+PT                                KR++  E Q R+++G+C+  D+K +  HKC   R  LL   +E+  ++    E  E
Sbjct:   83 FSSKLAKLEFPIYSGNDPTEWFNRVDQFFEYQGTAETQKMSLASFHLQGEANQWWQWLRRAYKDEDREVTWPIFEEELWARFGPPECEDFDEALLRVRQGGSLREYQREFERLGNRVQGWTQKALVGTFMGGLKPDIAEGIMMFKPKSLKEAISLARMRDEQLTRQRRNSKPFSINHNPIASFSPTK------------------------SPAAMPMKRLAWDEMQKRRSQGICFNCDEKFTPGHKCQKPRLLLLEGDDETSLQDDEEFEGDE 332          
BLAST of GT625763 vs. TrEMBL
Match: C0JJI3_SOYBN (Retrotransposon protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.646e-20
Identity = 67/172 (38.95%), Postives = 93/172 (54.07%), Query Frame = 1
Query:   55 VKLDSPRFDGSDMLQWIFKAEQFFKYYNTPDVHHL-IAAMHMEKEVVPRFQMLSRNHPFQSW--------LEFGPSPYESARASLFKLQHTTAVSEYYLKFTALANRSQGVSAEALLDYFISGLKPDIRRDVIAQTPINVPKAFSLVKLFEEK-YNRKLKSPSPTATSKFTP 540
            +KL+  RF+GSD   WIFK  QFF+Y+ TPD   L IA+ +ME   +  FQ + RN    SW          F  S YE     L KL   + VS Y  +F ALANR  G+ A  +L  F+SGL P I+R+V    P ++ +A S  +L EE+   RK+++ S   ++K  P
Sbjct:   61 MKLEVSRFNGSDPEGWIFKITQFFEYHATPDHERLTIASFYMEGLALAWFQWMHRNGQLSSWSTFLHAIHARFLSSTYEDPTGLLCKLTQRSIVSAYLSEFEALANRIIGLLAPFVLSCFVSGLNPVIQREVQVMQPHSLVQAISFARLHEERMLIRKMRALSVALSTKEQP 232          
BLAST of GT625763 vs. TrEMBL
Match: A5ASY8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014148 PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.952e-18
Identity = 66/268 (24.63%), Postives = 117/268 (43.66%), Query Frame = 1
Query:   40 FQIRNVKLDSPRFDGSDMLQWIFKAEQFFKYYNTPDVHHL-IAAMHMEKEVVPRFQMLSRNHPFQS------------WLEFGPSPYESARASLFKLQHTTAVSEYYLKFTALANRSQGVSAEALLDYFISGLKPDIRRDVIAQTPINVPKAFSLVKLFEEKYNRKLKSPSPTATSKFTPTNXXXXXXXXXXXXXXXXXXXXXXXXXXRTSQFKRMSLAEAQLRQARGLCYTFDKKISINHKCPNRTYLLSTSEESDAEEVPVVESTE 804
            F  +  KL+ P++ G+D  +W  K +QFF+Y   P    + + + H+E E    +Q L R++  +             W  FGP+  E    +L +++  +++ +Y  +F  L NR QG + +AL+  F+  LK +I  D+    P ++ +A  L +  +++  R+ +   P   +   P                             T   KR++  E Q R+A+GLC+  D K ++ HKC     LL     S  +E  + E  E
Sbjct:  138 FLSKLAKLEFPKYSGNDPTEWFNKVDQFFEYQGIPAAQKVSLXSFHLEGEANQWWQWLRRSYSEEGKEVAWADFEEELWARFGPTECEDFDEALSRVKQMSSLRDYQREFEKLGNRVQGWTQKALVGTFMGSLKSEIADDIRMFKPKSLKEAIXLARXRDDQLTRQRRFTRPLQPNWPQP-------------------DFSTQMKSKPTPTMKRLTWEEMQKRRAQGLCFNCDDKFTVGHKCRGPQLLLLEGNSSPNKEDDIDEEIE 386          
BLAST of GT625763 vs. TrEMBL
Match: A5BZW2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040537 PE=4 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.679e-18
Identity = 72/269 (26.77%), Postives = 116/269 (43.12%), Query Frame = 1
Query:   40 FQIRNVKLDSPRFDGSDMLQWIFKAEQFFKYYNTPDVHHL-IAAMHMEKEVVPRFQMLSRNHPFQS------------WLEFGPSPYESARASLFKLQHTTAVSEYYLKFTALANRSQGVSAEALLDYFISGLKPDIRRDVIAQTPINVPKAFSLVKLFEEKYNRKLKS-PSPTATSKFTPTNXXXXXXXXXXXXXXXXXXXXXXXXXXRTSQFKRMSLAEAQLRQARGLCYTFDKKISINHKCPNRTYLLSTSE---ESDAEEVPVVE 795
            FQ +  KL+ PRF   D   W+ K +QFF Y  TP    +  AA H+E E    +Q   R +  +             W  FGP+  E    +L K++      +Y  +F  L N+ QG + +AL+  F+ GL P I   +    P ++ +A SL ++ +E+  R+ ++ P+     + T  N                               KR+S  E + +++ GLC++ D++ +  HKC     LL   E   ES   E P+VE
Sbjct:   78 FQSKFAKLEFPRFAAGDPTMWLTKVKQFFDYQETPGTQKVQYAAYHLEDEANEWWQATKRAYAEEEAEITWEVFEEELWARFGPTECEDFDEALSKIKQAGXFRDYQREFERLVNKVQGWTQKALVGTFMGGLHPAIADGIRMFRPKSLKEAISLARMKDEQLQRQRRTQPNTPQIQRNTQQNSKGPLTT------------------------KRLSWEEIRKKRSLGLCFSCDERYTPGHKCRQPQLLLMEGESGWESSEMEEPLVE 322          
BLAST of GT625763 vs. TrEMBL
Match: A5AZ10_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041623 PE=4 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.265e-17
Identity = 65/246 (26.42%), Postives = 113/246 (45.93%), Query Frame = 1
Query:   40 FQIRNVKLDSPRFDGSDMLQWIFKAEQFFKYYNTPDVHHL-IAAMHMEKEVVPRFQMLSRNHPFQS------------WLEFGPSPYESARASLFKLQHTTAVSEYYLKFTALANRSQGVSAEALLDYFISGLKPDIRRDVIAQTPINVPKAFSLVKLFEEK--YNRKL-KSPSPTATSKFTPTNXXXXXXXXXXXXXXXXXXXXXXXXXXRTSQFKRMSLAEAQLRQARGLCYTFDKKISINHKC 729
            F  +  KL+ P++ G+D  +W  +  QFF++ +T D   + +A+ H+E+E    +Q L R +  +             W  FGP   E    +L K++   ++ +Y  +F  L NR  G S +AL+  F+ GL+ +I   +    P  + +A SL  + +E+  + R++ + P P  T    PT                           + S  KR+S  E Q R+A+GLC+  D+K +  H+C
Sbjct:   68 FSSKMAKLEFPKYSGADPTEWCNRVAQFFEFQDTVDNQKVSLASFHLEREANQWWQWLRRAYQEEDRVVTWELFEEELWARFGPIECEDFDEALSKVRQIGSLRDYQKEFERLGNRVHGWSQKALVGSFMGGLRSEISETIRMFKPKTLKEATSLAHMKDEQLQHQRRISRPPLPIRTLLALPTTT-------------------------KASHVKRLSWEEMQKRRAQGLCFNCDEKFTSGHRC 288          
The following BLAST results are available for this feature:
BLAST of GT625763 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q84ZV5_SOYBN1.997e-5544.94Polyprotein OS=Glycine max PE=4 SV=1[more]
A5ADJ3_VITVI7.400e-2630.80Putative uncharacterized protein OS=Vitis vinifera... [more]
A5BEK1_VITVI2.812e-2530.80Putative uncharacterized protein OS=Vitis vinifera... [more]
A5X2S4_9ERIC4.964e-2229.12Polyprotein OS=Primula vulgaris PE=4 SV=1[more]
A5C5K2_VITVI1.886e-2127.63Putative uncharacterized protein OS=Vitis vinifera... [more]
B9NDF1_POPTR1.597e-2025.18Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C0JJI3_SOYBN4.646e-2038.95Retrotransposon protein OS=Glycine max PE=4 SV=1[more]
A5ASY8_VITVI1.952e-1824.63Putative uncharacterized protein OS=Vitis vinifera... [more]
A5BZW2_VITVI5.679e-1826.77Putative uncharacterized protein OS=Vitis vinifera... [more]
A5AZ10_VITVI1.265e-1726.42Putative uncharacterized protein OS=Vitis vinifera... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag proteinPFAMPF03732Retrotrans_gagcoord: 83..135
score: 0.0
NoneNo IPR availableSEGsegsegcoord: 1..13
score: NAcoord: 183..208
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT625763 ID=GT625763; Name=GT625763; organism=Lens culinaris; type=EST; length=804bp
TCTCCGGCAGGTTCACCGTCAACACCACCGCCACTACCCTTTCAGATTCG
TAATGTCAAGCTGGATTCTCCCCGATTCGACGGTTCTGATATGTTACAGT
GGATATTCAAAGCCGAGCAATTCTTTAAATACTACAACACACCAGATGTT
CATCATTTGATAGCGGCGATGCACATGGAGAAGGAGGTGGTTCCTAGGTT
TCAGATGCTGTCCCGAAATCATCCTTTCCAGTCTTGGTTAGAATTTGGCC
CTTCACCATATGAATCTGCACGAGCTTCCTTGTTCAAACTTCAACATACC
ACCGCTGTTAGTGAGTATTATCTGAAATTCACCGCTCTTGCTAATCGTTC
TCAAGGTGTGAGTGCTGAGGCTCTTCTTGATTATTTCATTAGCGGTTTGA
AACCGGATATACGCAGGGATGTCATTGCTCAAACACCTATCAACGTACCC
AAAGCTTTTTCTCTTGTGAAGCTTTTTGAAGAGAAATATAATCGTAAACT
CAAATCGCCTAGCCCAACGGCCACATCCAAATTCACCCCTACCAACTACC
CATATACTCCTCCAAAATCATCCTTACCACCTTTGTTACCCACCCCTCCC
CAGAAACCTTTGAACACCCCAAATCGCACTTCCCAGTTTAAAAGAATGTC
TCTTGCAGAGGCCCAGTTAAGACAAGCAAGAGGACTTTGTTATACTTTTG
ACAAAAAAATTTCAATTAACCATAAATGTCCCAATCGAACATATCTTCTT
AGCACTAGTGAAGAGAGTGATGCTGAAGAGGTACCAGTGGTTGAGTCCAC
GGAA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR005162Retrotrans_gag_dom