GT627178

EST Overview


Name	GT627178
Unique Name	GT627178
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	809

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
KEGG analysis for Lens culinaris unigene v1	2011-01-05
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

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BLAST of GT627178 vs. TrEMBL
Match: B7FL29_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 508.064 bits (1307), Expect = 3.698e-142
Identity = 248/254 (97.64%), Postives = 253/254 (99.61%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNE+FRLLYDTKG+FRLHSVRDDE+KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGG+NRGRVG+IKNREKHKGTFETIHVQDATGHEFATRL NVFTIGKGTKPWVSLPKGKGIKLTVIEEARK
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGKNRGRVGVIKNREKHKGTFETIHVQDATGHEFATRLVNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 254

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BLAST of GT627178 vs. TrEMBL
Match: Q8LJW0_SOYBN (40S ribosomal S4 protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 507.679 bits (1306), Expect = 4.830e-142
Identity = 244/254 (96.06%), Postives = 254/254 (100.00%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG+FRLHSVRDDE+KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP+IRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIHVQD+TGHEFATR+GNVFTIGKGTKPW+SLPKGKGIKL++IEEARK
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDSTGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARK 254

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BLAST of GT627178 vs. TrEMBL
Match: C6TN03_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 505.753 bits (1301), Expect = 1.835e-141
Identity = 242/254 (95.28%), Postives = 254/254 (100.00%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKK+LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG+FRLHS+RDDE+KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP+IRANDT+KLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIHVQDATGHEFATR+GNVFTIGKGTKPW+SLPKGKGIKL++IEEARK
Sbjct:    1 MARGLKKYLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTVKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARK 254

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BLAST of GT627178 vs. TrEMBL
Match: C6TNY3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 505.368 bits (1300), Expect = 2.397e-141
Identity = 243/254 (95.67%), Postives = 252/254 (99.21%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMD VSIPKTNENF LLYDTKG+FRLHSVRDDE+KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP+IRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIHVQDATGHEFATR+GNVFTIGKGTKPW+SLPKGKGIKL++IEEARK
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDAVSIPKTNENFHLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARK 254

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BLAST of GT627178 vs. TrEMBL
Match: C6TJG9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 502.286 bits (1292), Expect = 2.029e-140
Identity = 243/254 (95.67%), Postives = 252/254 (99.21%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLK ALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG+FRLHSV DDE+KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP+IRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIHVQDATGHEFATR+GNVFTIGKGTKPW+SLPKGKGIKL++IEEARK
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKCALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVIDDEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARK 254

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BLAST of GT627178 vs. TrEMBL
Match: B9RPJ9_RICCO (40S ribosomal protein S4, putative OS=Ricinus communis GN=RCOM_1378650 PE=4 SV=1)

HSP 1 Score: 501.901 bits (1291), Expect = 2.650e-140
Identity = 241/254 (94.88%), Postives = 251/254 (98.82%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG+FRLHS+RDDE+KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP+I+ANDTIKLDLE NKI DFIKFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIHVQDATGHEFATR+GNVFTIGKGTKPWVSLPKGKGIKL++IEEARK
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARK 254

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BLAST of GT627178 vs. TrEMBL
Match: B9N3A7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_837007 PE=4 SV=1)

HSP 1 Score: 501.901 bits (1291), Expect = 2.650e-140
Identity = 240/254 (94.49%), Postives = 253/254 (99.61%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKG+FRLHS+RDDE+KFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDP+I+ANDTIKLDLE NKIVDFIKFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIHVQDATGHEFATRLGNVFTIGKGTKPW+SLPKGKGIKL++IEEARK
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPKGKGIKLSIIEEARK 254

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BLAST of GT627178 vs. TrEMBL
Match: B9HCZ8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_831930 PE=4 SV=1)

HSP 1 Score: 500.36 bits (1287), Expect = 7.711e-140
Identity = 239/254 (94.09%), Postives = 253/254 (99.61%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKG+FRLHS+RDDE+KFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDP+I+ANDTIKLDLE NKIVDFIKFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIHVQDATGHEFATRLGNVFTIGKG+KPW+SLPKGKGIKL++IEEARK
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGSKPWISLPKGKGIKLSIIEEARK 254

[Close]

BLAST of GT627178 vs. TrEMBL
Match: B9RG48_RICCO (40S ribosomal protein S4, putative OS=Ricinus communis GN=RCOM_1439050 PE=4 SV=1)

HSP 1 Score: 498.819 bits (1283), Expect = 2.244e-139
Identity = 238/254 (93.70%), Postives = 251/254 (98.82%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG+FRLHS+RDDE+KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP+I+ANDTIKLDLE NKI +FIKFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIH+QD+TGHEFATR+GNVFTIGKGTKPWVSLPKGKGIKL++IEEARK
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRMGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARK 254

[Close]

BLAST of GT627178 vs. TrEMBL
Match: A9PD40_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 498.049 bits (1281), Expect = 3.827e-139
Identity = 239/254 (94.09%), Postives = 252/254 (99.21%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALT REV+AILMQRHVLVDGKVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKG+FRLHS+RDDE+KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP+I+ANDTIKLDLE NKIVDFIKFDVGNVVMVTGGRNRGRVG+IKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPW+SLPKGKGIKL++IEEA+K
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTGREVLAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPKGKGIKLSIIEEAKK 254

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BLAST of GT627178 vs. SwissProt
Match: RS42_ARATH (40S ribosomal protein S4-2 OS=Arabidopsis thaliana GN=RPS4B PE=2 SV=4)

HSP 1 Score: 495.738 bits (1275), Expect = 1.239e-139
Identity = 233/254 (91.73%), Postives = 252/254 (99.21%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG+FRLHS++D+E+KFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDP+I+ NDTIKLDLEENKIV+FIKFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIH+QD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKLT+IEEARK
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARK 254

[Close]

BLAST of GT627178 vs. SwissProt
Match: RS41_ARATH (40S ribosomal protein S4-1 OS=Arabidopsis thaliana GN=RPS4A PE=2 SV=1)

HSP 1 Score: 495.738 bits (1275), Expect = 1.239e-139
Identity = 233/254 (91.73%), Postives = 252/254 (99.21%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG+FRLHS++D+E+KFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDP+I+ NDTIKLDLEENKIV+FIKFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIH+QD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKLT+IEEARK
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARK 254

[Close]

BLAST of GT627178 vs. SwissProt
Match: RS4_SOLTU (40S ribosomal protein S4 OS=Solanum tuberosum GN=RPS4 PE=2 SV=1)

HSP 1 Score: 493.426 bits (1269), Expect = 6.151e-139
Identity = 233/254 (91.73%), Postives = 251/254 (98.82%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYREVI+ILMQR V+VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG+FRLHS+RD+ESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP+I+ANDTIKLDLE NKIVDFIKFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FET+H+QD+ GHEFATRLGNVFT+GKGTKPWVSLPKGKGIKLT+IE+ARK
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYREVISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEDARK 254

[Close]

BLAST of GT627178 vs. SwissProt
Match: RS43_ARATH (40S ribosomal protein S4-3 OS=Arabidopsis thaliana GN=RPS4D PE=2 SV=2)

HSP 1 Score: 493.426 bits (1269), Expect = 6.151e-139
Identity = 232/254 (91.34%), Postives = 251/254 (98.82%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG+FRLHS++D+E+KFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDP+I+ NDTIKLDLE NKIV+FIKFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIH+QD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKLT+IEEARK
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARK 254

[Close]

BLAST of GT627178 vs. SwissProt
Match: RS4_GOSHI (40S ribosomal protein S4 OS=Gossypium hirsutum GN=RPS4 PE=2 SV=1)

HSP 1 Score: 488.419 bits (1256), Expect = 1.979e-137
Identity = 235/254 (92.52%), Postives = 248/254 (97.64%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHV+VDGKVRTDKTYPAGFMDVVSIPKTNE+FRLLYDTKG+F LH++  DE+KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP+I+ANDTIKLDLE NKIVDFIKFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIHVQDA GHEFATRLGNVFTIGKGTKPWVSLPK KGIKL++IEEARK
Sbjct:    1 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPKRKGIKLSIIEEARK 254

[Close]

BLAST of GT627178 vs. SwissProt
Match: RS4_MAIZE (40S ribosomal protein S4 OS=Zea mays GN=RPS4 PE=2 SV=1)

HSP 1 Score: 484.567 bits (1246), Expect = 2.857e-136
Identity = 228/254 (89.76%), Postives = 248/254 (97.64%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILI+RNRLKYALTYREVI+ILMQRHVLVDGKVRTDKTYPAGFMDV+SIPKTNEN+RLLYDTKG+FRLH +RD+++KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP+I+ANDTIK+DLE NKIVDFIKFDVGNVVMVTGGRN GRVG+IKNREKHKG+FETIHV+D+ GH+FATR+GNVFTIGKG KPWVSLPKGKGIKL++IEE RK
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRK 254

[Close]

BLAST of GT627178 vs. SwissProt
Match: RS4_ORYSJ (40S ribosomal protein S4 OS=Oryza sativa subsp. japonica GN=RPS4 PE=2 SV=3)

HSP 1 Score: 483.026 bits (1242), Expect = 8.313e-136
Identity = 229/254 (90.16%), Postives = 247/254 (97.24%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILI+RNRLKYALTYREVI+ILMQRHVLVDGKVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKG+FRL SV+D+++KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP+I+ANDTIK+DLE NKIVDFIKFDVGNVVMVTGGRN GRVG+IKNREKHKG+FETIHV+DA GH+FATRLGNVFTIGKG KPWVSLPKGKGIKL++IEE RK
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRK 254

[Close]

BLAST of GT627178 vs. SwissProt
Match: RS4_PRUAR (40S ribosomal protein S4 OS=Prunus armeniaca GN=RPS4 PE=2 SV=1)

HSP 1 Score: 469.929 bits (1208), Expect = 7.283e-132
Identity = 226/254 (88.98%), Postives = 242/254 (95.28%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV++ILMQRH+LVDGK+     +     DVVSIPKTNENFRLLYDTKG+FRLHS+RD+ESKFKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDP+I+ANDTIKLDLE NKI DFIKFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLT++EEA+K
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVVSILMQRHILVDGKIH----FCIRLSDVVSIPKTNENFRLLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTILEEAKK 250

[Close]

BLAST of GT627178 vs. SwissProt
Match: RS4_CRIGR (40S ribosomal protein S4 OS=Cricetulus griseus GN=RPS4 PE=2 SV=2)

HSP 1 Score: 376.711 bits (966), Expect = 8.391e-104
Identity = 174/254 (68.50%), Postives = 209/254 (82.28%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKG+F +H +  +E+K+KLCKVR +  G KGIP+L T+D RTIRYPDP+I+ NDTI++DLE  KI DFIKFD GN+ MVTGG N GR+G+I NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LT+ EE  K
Sbjct:    1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITSEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDK 254

[Close]

BLAST of GT627178 vs. SwissProt
Match: RS4_BOVIN (40S ribosomal protein S4 OS=Bos taurus GN=RPS4 PE=2 SV=3)

HSP 1 Score: 376.326 bits (965), Expect = 1.096e-103
Identity = 174/254 (68.50%), Postives = 209/254 (82.28%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKG+F +H +  +E+K+KLCKVR +  G KGIP+L T+D RTIRYPDP+I+ NDTI++DLE  KI DFIKFD GN+ MVTGG N GR+G+I NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LT+ EE  K
Sbjct:    1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDK 254

[Close]

BLAST of GT627178 vs. TAIR peptide
Match: AT5G07090.1 (| Symbols: | Ribosomal protein S4 (RPS4A) family protein | chr5:2202410-2203805 FORWARD LENGTH=262)

HSP 1 Score: 495.738 bits (1275), Expect = 1.216e-140
Identity = 233/254 (91.73%), Postives = 252/254 (99.21%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG+FRLHS++D+E+KFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDP+I+ NDTIKLDLEENKIV+FIKFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIH+QD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKLT+IEEARK
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARK 254

[Close]

BLAST of GT627178 vs. TAIR peptide
Match: AT2G17360.1 (| Symbols: | Ribosomal protein S4 (RPS4A) family protein | chr2:7546598-7548138 FORWARD LENGTH=261)

HSP 1 Score: 495.738 bits (1275), Expect = 1.216e-140
Identity = 233/254 (91.73%), Postives = 252/254 (99.21%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG+FRLHS++D+E+KFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDP+I+ NDTIKLDLEENKIV+FIKFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIH+QD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKLT+IEEARK
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARK 254

[Close]

BLAST of GT627178 vs. TAIR peptide
Match: AT5G58420.1 (| Symbols: | Ribosomal protein S4 (RPS4A) family protein | chr5:23619599-23620896 FORWARD LENGTH=262)

HSP 1 Score: 493.426 bits (1269), Expect = 6.034e-140
Identity = 232/254 (91.34%), Postives = 251/254 (98.82%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG+FRLHS++D+E+KFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDP+I+ NDTIKLDLE NKIV+FIKFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIH+QD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKLT+IEEARK
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARK 254

[Close]

BLAST of GT627178 vs. TAIR peptide
Match: AT5G07090.2 (| Symbols: | Ribosomal protein S4 (RPS4A) family protein | chr5:2202783-2203805 FORWARD LENGTH=244)

HSP 1 Score: 456.833 bits (1174), Expect = 6.259e-129
Identity = 215/236 (91.10%), Postives = 234/236 (99.15%), Query Frame = 3

Query:  102 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARK 809
            MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG+FRLHS++D+E+KFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDP+I+ NDTIKLDLEENKIV+FIKFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIH+QD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKLT+IEEARK
Sbjct:    1 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARK 236

[Close]

BLAST of GT627178 vs. TAIR peptide
Match: AT2G17360.2 (| Symbols: | Ribosomal protein S4 (RPS4A) family protein | chr2:7546598-7548041 FORWARD LENGTH=184)

HSP 1 Score: 348.977 bits (894), Expect = 1.838e-96
Identity = 164/181 (90.61%), Postives = 177/181 (97.79%), Query Frame = 3

Query:   48 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGKFRLHSVRDDESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVV 590
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG+FRLHS++D+E+KFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDP+I+ NDTIKLDLEENKIV+FIKFDVG  V
Sbjct:    1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGKCV 181

The following BLAST results are available for this feature:

BLAST of GT627178 vs. TrEMBL
BLAST of GT627178 vs. SwissProt
BLAST of GT627178 vs. TAIR peptide

BLAST of GT627178 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FL29_MEDTR	3.698e-142	97.64	Putative uncharacterized protein OS=Medicago trunc...	[more]
Q8LJW0_SOYBN	4.830e-142	96.06	40S ribosomal S4 protein OS=Glycine max PE=2 SV=1	[more]
C6TN03_SOYBN	1.835e-141	95.28	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TNY3_SOYBN	2.397e-141	95.67	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TJG9_SOYBN	2.029e-140	95.67	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9RPJ9_RICCO	2.650e-140	94.88	40S ribosomal protein S4, putative OS=Ricinus comm...	[more]
B9N3A7_POPTR	2.650e-140	94.49	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9HCZ8_POPTR	7.711e-140	94.09	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RG48_RICCO	2.244e-139	93.70	40S ribosomal protein S4, putative OS=Ricinus comm...	[more]
A9PD40_POPTR	3.827e-139	94.09	Putative uncharacterized protein OS=Populus tricho...	[more]

BLAST of GT627178 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RS42_ARATH	1.239e-139	91.73	40S ribosomal protein S4-2 OS=Arabidopsis thaliana...	[more]
RS41_ARATH	1.239e-139	91.73	40S ribosomal protein S4-1 OS=Arabidopsis thaliana...	[more]
RS4_SOLTU	6.151e-139	91.73	40S ribosomal protein S4 OS=Solanum tuberosum GN=R...	[more]
RS43_ARATH	6.151e-139	91.34	40S ribosomal protein S4-3 OS=Arabidopsis thaliana...	[more]
RS4_GOSHI	1.979e-137	92.52	40S ribosomal protein S4 OS=Gossypium hirsutum GN=...	[more]
RS4_MAIZE	2.857e-136	89.76	40S ribosomal protein S4 OS=Zea mays GN=RPS4 PE=2 ...	[more]
RS4_ORYSJ	8.313e-136	90.16	40S ribosomal protein S4 OS=Oryza sativa subsp. ja...	[more]
RS4_PRUAR	7.283e-132	88.98	40S ribosomal protein S4 OS=Prunus armeniaca GN=RP...	[more]
RS4_CRIGR	8.391e-104	68.50	40S ribosomal protein S4 OS=Cricetulus griseus GN=...	[more]
RS4_BOVIN	1.096e-103	68.50	40S ribosomal protein S4 OS=Bos taurus GN=RPS4 PE=...	[more]

BLAST of GT627178 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G07090.1	1.216e-140	91.73	\| Symbols: \| Ribosomal protein S4 (RPS4A) family ...	[more]
AT2G17360.1	1.216e-140	91.73	\| Symbols: \| Ribosomal protein S4 (RPS4A) family ...	[more]
AT5G58420.1	6.034e-140	91.34	\| Symbols: \| Ribosomal protein S4 (RPS4A) family ...	[more]
AT5G07090.2	6.259e-129	91.10	\| Symbols: \| Ribosomal protein S4 (RPS4A) family ...	[more]
AT2G17360.2	1.838e-96	90.61	\| Symbols: \| Ribosomal protein S4 (RPS4A) family ...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 44..58 score
None	No IPR available	SEG	seg	seg	coord: 1..14 score
None	No IPR available	SEG	seg	seg	coord: 60..71 score
IPR000876	Ribosomal protein S4e	PIR	PIRSF002116	Ribosomal protein S4a/S4e	coord: 15..256 score: 6.8e
IPR000876	Ribosomal protein S4e	PANTHER	PTHR11581	30S/40S RIBOSOMAL PROTEIN S4	coord: 17..269 score: 7.8e
IPR002942	RNA-binding S4	PFAM	PF01479	S4	coord: 62..105 score: 2
IPR002942	RNA-binding S4	SMART	SM00363	no description	coord: 57..121 score: 2.9
IPR002942	RNA-binding S4	PROFILE	PS50889	S4	coord: 57..119 score: 9
IPR005824	KOW	PFAM	PF00467	KOW	coord: 192..225 score: 8.1
IPR005824	KOW	SMART	SM00739	no description	coord: 189..216 score: 0
IPR013843	Ribosomal protein S4e, N-terminal	PFAM	PF08071	RS4NT	coord: 18..55 score: 8.4
IPR013845	Ribosomal protein S4e, central	PFAM	PF00900	Ribosomal_S4e	coord: 109..185 score: 2.5
IPR018199	Ribosomal protein S4e, N-terminal, conserved site	PROSITE	PS00528	RIBOSOMAL_S4E	coord: 23..37 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT627178 ID=GT627178; Name=GT627178; organism=Lens culinaris; type=EST; length=809bp
GTTTGTTTCTCTACCTTTGTAGCTCTTGTTTGGTTTGTTCTTCCAAAATG
GCTAGAGGATTGAAGAAGCATTTGAAGAGGCTCAATGCCCCCAAGCATTG
GATGCTTGACAAACTGGGTGGTGCTTTTGCTCCTAAACCCTCATCTGGAC
CACACAAGTCCAGGGAATGCCTACCACTCATTCTCATATTGCGTAACAGA
CTGAAGTATGCTTTGACATACCGTGAAGTCATTGCTATTCTGATGCAAAG
GCATGTCCTTGTTGATGGCAAAGTTAGGACTGACAAGACTTATCCTGCCG
GATTCATGGATGTTGTGTCCATCCCCAAAACAAATGAGAACTTTCGCCTG
CTTTATGACACCAAAGGAAAATTCCGTCTCCATTCTGTCAGAGATGATGA
GTCAAAGTTCAAGCTCTGCAAGGTTCGTTCAGTGCAATTTGGGCAGAAAG
GTATCCCATACTTGAACACCTATGATGGCCGCACCATCCGCTACCCAGAC
CCTGTCATCAGGGCAAATGACACCATTAAGCTGGATCTTGAGGAGAACAA
GATTGTTGACTTCATCAAATTTGATGTTGGGAATGTAGTTATGGTTACTG
GTGGAAGGAATAGGGGACGTGTCGGAATCATCAAGAACAGGGAGAAACAT
AAGGGTACCTTTGAGACAATCCACGTTCAGGATGCCACTGGACATGAGTT
TGCAACTCGTTTGGGCAATGTGTTCACCATTGGCAAGGGTACAAAGCCAT
GGGTATCTCTTCCCAAGGGTAAGGGTATCAAGCTTACAGTCATCGAGGAA
GCTAGAAAA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0003723	RNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR000876	Ribosomal_S4e
IPR002942	S4_RNA-bd
IPR005824	KOW
IPR013843	Ribosomal_S4e_N
IPR013845	Ribosomal_S4e_central_region
IPR018199	Ribosomal_S4e_N_CS

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