GT623988

EST Overview


Name	GT623988
Unique Name	GT623988
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	833

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

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BLAST of GT623988 vs. TrEMBL
Match: D5FFG4_MEDTR (MYB transcription factor MYB2 OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 1.566e-82
Identity = 166/233 (71.24%), Postives = 173/233 (74.25%), Query Frame = 3

Query:   78 MSSASPAAVSGEFMLFGVRVVVDSMRKSVSMNNLSQYEQS-QXXXXXXXXXXXXXXXXXXXXXXXXXVPNNSGRNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSAIPMEEDQVKNQDSVSQVQPMCPAAPETRKSNGFPFMSVYHLGVDES-PMEELTLGQGNAKQSFTTN-LFNPIPFVVSD 767
            MSSAS      +FMLFGVRVVVDSMRKSVSMNNL QYEQ  Q                         VP NS RNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRG SRNYVKTRTPTQVASHAQKYF               FDITTD+VSAIPMEE+QVKNQDSVSQ+QP+CPA PETRK NGFPFMSVY LGV+ES PMEELTLGQGN K +F TN LFNPIPFVVSD
Sbjct:    1 MSSASTTETPPQFMLFGVRVVVDSMRKSVSMNNLPQYEQQPQDNIIIRDDNINKDVITAGYASADDAVPQNSARNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGTSRNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVSAIPMEEEQVKNQDSVSQLQPLCPAVPETRKINGFPFMSVYELGVNESTPMEELTLGQGNVKHNFQTNSLFNPIPFVVSD 233

[Close]

BLAST of GT623988 vs. TrEMBL
Match: Q0PJH8_SOYBN (MYB transcription factor MYB176 OS=Glycine max GN=MYB176 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 8.082e-63
Identity = 141/241 (58.51%), Postives = 158/241 (65.56%), Query Frame = 3

Query:   78 MSSASPAAVSGEFMLFGVRVVVDSMRKSVSMNNLSQYEQSQXXXXXXXXXXXXXXXXXXXXXXXXXVPNNSGRNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSAIPMEEDQVKNQDSV--SQVQPMCPAAPETRKSNGFPFMSVYHLGVDES----------PMEELTLGQGNAKQSFTTNLFNPIPFVVS 764
            MS AS AA SGE MLFGVRVVVDSMRKSVSMNNLSQYE                             P NSGR+R+RERKRG+PWTEEEHKLFLVGLQKVGKGDWRGIS+NYVKTRTPTQVASHAQKYF               FDITTD+VSAIPMEE+QV+NQD++  SQ QP+ PA  ET K NGFP M VY  GV  S          PMEELTLGQGN ++    N  + +  +++
Sbjct:    1 MSRASSAA-SGEIMLFGVRVVVDSMRKSVSMNNLSQYEHP---LDATTTTNNKDAVAAGYASADDAAPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVSAIPMEEEQVQNQDTLCHSQQQPVFPA--ETSKINGFPAMPVYQFGVGSSGVISVQGTGNPMEELTLGQGNVEKHNVPNKASTVSGIIT 235

[Close]

BLAST of GT623988 vs. TrEMBL
Match: Q0PJH9_SOYBN (MYB transcription factor MYB173 OS=Glycine max GN=MYB175 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 6.841e-62
Identity = 135/243 (55.56%), Postives = 154/243 (63.37%), Query Frame = 3

Query:   72 STMSSASPAAVSGEFMLFGVRVVVDSMRKSVSMNNLSQYEQSQXXXXXXXXXXXXXXXXXXXXXXXXXVPNNSGRNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSAIPMEEDQVKNQDSVSQVQPMCPAAP-ETRKSNGFPFMSVYHLGVDES-----------PMEELTLGQGNAKQSFTTNLFNPIPFVVS 764
            S  SSA+ +A SGE +LFGVRVVVDSMRKSVSM+NLSQYE  Q                          P NSGR R+RERKRG+PWTEEEHKLFLVGLQKVGKGDWRGIS+NYVKTRTPTQVASHAQKYF               FDITTD+VSAIPME +QV+NQD++S  Q   P  P ET K NGFP M VY  G   S           PMEELTLGQGN ++    N  + +  +++
Sbjct:    2 SRASSAADSAASGEIILFGVRVVVDSMRKSVSMSNLSQYEHPQDGSNNKDALAAGYASADDA------APQNSGRLRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVSAIPMEGEQVQNQDTLSHSQQQSPLFPAETSKINGFPMMPVYQFGFGSSGVISVQGGNGNPMEELTLGQGNVEKHNVPNKVSTVSDIIT 238

[Close]

BLAST of GT623988 vs. TrEMBL
Match: Q0PJI1_SOYBN (MYB transcription factor MYB143 OS=Glycine max GN=MYB143 PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 5.421e-59
Identity = 135/238 (56.72%), Postives = 152/238 (63.87%), Query Frame = 3

Query:   72 STMSSASPAAVSGEFMLFGVRVVVDSMRKSVSMNNLSQYEQSQXXXXXXXXXXXXXXXXXXXXXXXXXVPNNSGRNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSAIPMEEDQVKNQDSVSQVQPMCPAAPETRKSNGFPFMSVYHLGVDE--------SPMEELTLGQGNAKQSF-TTNLFNPIPFV 758
            S+  SA+ +AVSGE MLFGVRVVVDSMRKSVSMNNLSQYE  +                          P NSG+NRDR  KRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYF               FDITTDSVS  P+EE Q+++QD+VS  +P+ P  PE    NGFP MS+Y   V          +PME LTL QGN +Q+  +T L   IP V
Sbjct:    4 SSSCSAAGSAVSGEIMLFGVRVVVDSMRKSVSMNNLSQYELPRDAANAKDDVAAGYASADDA------APINSGKNRDR--KRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRTNLNRRRRRSSLFDITTDSVSTTPVEEGQIQHQDNVSLFRPVYPVTPEGSYMNGFPMMSMYPKDVGSRVMSVQAGNPMETLTLEQGNVEQNDPSTKLVCTIPIV 233

[Close]

BLAST of GT623988 vs. TrEMBL
Match: Q0PJI2_SOYBN (MYB transcription factor MYB183 OS=Glycine max GN=MYB183 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 3.514e-58
Identity = 133/228 (58.33%), Postives = 146/228 (64.04%), Query Frame = 3

Query:   66 LDSTMSSASPAAVSGEFMLFGVRVVVDSMRKSVSMNNLSQYEQSQXXXXXXXXXXXXXXXXXXXXXXXXXVPNNSGRNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSAIPMEED-QVKNQDSVSQVQPMCPAAPETRKSNGFPFMSVYHLGVDE--------SPMEELTLGQGNAKQS 722
            L S+ SSA  +AVSGE MLFGVRVVVDSMRKSVSMNNLSQYE  +                          P NS +NRDR  KRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYF               FDITTDSVS  PMEE  Q+++QD+VS   P+ P  PE    NGFP MS+Y   V          +PME LTLGQGN +Q+
Sbjct:    3 LSSSSSSAVDSAVSGEIMLFGVRVVVDSMRKSVSMNNLSQYELPRDAANAKDDAAGYASADDA-------APINSDKNRDR--KRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRTNLNRRRRRSSLFDITTDSVSTTPMEEGVQIQHQDNVSLFHPVYPVTPEGSNMNGFPKMSMYPKDVGSGVMSVQAGNPMETLTLGQGNVEQN 221

[Close]

BLAST of GT623988 vs. TrEMBL
Match: Q84UB0_MALXI (Transcription factor Myb1 OS=Malus xiaojinensis PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 3.763e-52
Identity = 120/238 (50.42%), Postives = 147/238 (61.76%), Query Frame = 3

Query:   75 TMSSASPAAVSGEFMLFGVRVVVDSMRKSVSMNNLSQYEQSQXXXXXXXXXXXXXXXXXXXXXXXXX--VPNNSGRNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSAIPMEEDQVKNQDSVSQVQ--PMCPAAP-ETRKSNGFPFMSVYHLGVD--------ESPMEELTLGQGNAKQSFTTNLFNPI 749
            T S+  PA  +GE MLFGVR+VVDSMRKSVS+NNLSQYE  Q                           V +NSG NR+RERKRG+PWTEEEHKLFL+GLQK GKGDWRGISRN+VKTRTPTQVASHAQKY+               FDITTD+V+  PM+E+QV++QD++SQ Q  P+ P  P E R + GF  +  +   V         E+PME L L Q N + S +  L +P+
Sbjct:    5 TCSTVEPAG-AGEIMLFGVRLVVDSMRKSVSLNNLSQYEHPQEAASNNGNNGTAAGKDDAAPGYASENDVVHNSGGNRERERKRGVPWTEEEHKLFLLGLQKAGKGDWRGISRNFVKTRTPTQVASHAQKYYLRRSNLNRRRRRSSLFDITTDTVAPTPMDEEQVQHQDNISQSQLHPLPPPPPSEPRDAGGFSMVPNFARTVGPAVLPVHIENPMENLALRQANPENSTSAKLVHPV 241

[Close]

BLAST of GT623988 vs. TrEMBL
Match: A7UMB2_ROSHC (Myb transcription factor OS=Rosa hybrid cultivar GN=myb PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 7.846e-50
Identity = 114/230 (49.57%), Postives = 139/230 (60.43%), Query Frame = 3

Query:   81 SSASPAA-VSGEFMLFGVRVVVDSMRKSVSMNNLSQYEQSQXXXXXXXXXXXXXXXXXXXXXXXXXVPNNSGRNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSAIPMEEDQVKNQDSVSQVQPMCPAAP--ETRKSNGFPFMSVYHLGVDESPMEELTLGQGNAKQSFTTNLFNPIPFVV 761
            ++  PAA  + EFMLFGVRVVVDSMRKSVS+NNLSQYE                            V +NSG NR+RERKRG+PWTE+EHKLFL+GLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYF               FDITTDSV A PMEE+QV +QD+ S +  + P  P  E+   NGF  + ++ + V  + ++          ++ T     P P +V
Sbjct:    8 TTVDPAAGAAKEFMLFGVRVVVDSMRKSVSLNNLSQYEHPTEASNNNNDAVAGYVSEND-------VVHNSGGNRERERKRGVPWTEDEHKLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRSNHNRRRRRSSLFDITTDSVPATPMEEEQVHHQDNTSHLHSLPPPPPQSESCNPNGFSMVPIFPMNVGPAVVQSRHYRNNRKSKTGTRKSGVPSPKIV 230

[Close]

BLAST of GT623988 vs. TrEMBL
Match: A5C7A7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040763 PE=4 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 9.591e-48
Identity = 114/221 (51.58%), Postives = 134/221 (60.63%), Query Frame = 3

Query:  117 MLFGVRVVVDSMRKSVSMNNLSQYEQSQXXXXXXXXXXXXXXXXXXXXXXXXXVPNNSGRNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSAIPMEEDQV-KNQDSVSQVQPMCPAAPETRKSNGFPFMSVYHLGVD--------ESPMEELTLGQGNAKQSFTTNLFNPIP 752
            MLFGVRV VDSMRKSVS+NNLSQYEQ                           V ++S  NR  ERKRG+PWTEEEHKLFLVGLQKVGKGDWRGISRN+VKTRTPTQVASHAQKYF               FDITT+SV+A+PMEE+QV  +Q++ SQ Q       ET    GFP +  + + ++        ++PME LTLGQ +      T L  PIP
Sbjct:   36 MLFGVRVTVDSMRKSVSLNNLSQYEQPHESSNADATPAAGYVSADD-------VAHHSSGNR--ERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNLNRRRRRSSLFDITTESVTAVPMEEEQVLHHQENTSQSQQSPKTFSETGSGGGFPVVPAFPMPINPVVVPVPIQNPMENLTLGQNDV----NTRLVRPIP 243

[Close]

BLAST of GT623988 vs. TrEMBL
Match: D3Y3F5_9ROSI (MYB transcription factor 1 OS=Vitis pseudoreticulata PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 4.029e-46
Identity = 110/224 (49.11%), Postives = 131/224 (58.48%), Query Frame = 3

Query:  117 MLFGVRVVVDSMRKSVSMNNLSQYEQSQXXXXXXXXXXXXXXXXXXXXXXXXXVPNNSGRNR---DRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSAIPMEEDQV-KNQDSVSQVQPMCPAAPETRKSNGFPFMSVYHLGVD--------ESPMEELTLGQGNAKQSFTTNLFNPIP 752
            MLFGVRV VDSMRKSVS+NNLSQYEQ                           V  +   +    +RERKRG+PWTEEEHKLFLVGLQKVGKGDWRGISRN+VKTRTPTQVASHAQKYF               FDITT+SV+A+PMEE+QV  +Q++  Q Q       +T    GFP +  + +  +        ++PME LTLGQ +      T L  PIP
Sbjct:   36 MLFGVRVTVDSMRKSVSLNNLSQYEQPHESSNADATPQPHESSNADATPAAGYVSADDVAHHSSGNRERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNLNRRRRRSSLFDITTESVTAVPMEEEQVLHHQENTPQSQQSPKTFSDTGSGGGFPVVPAFPMPTNPVVVPVPIQNPMENLTLGQNDV----NTRLVRPIP 255

[Close]

BLAST of GT623988 vs. TrEMBL
Match: D3Y3F6_9ROSI (MYB transcription factor 2 OS=Vitis pseudoreticulata PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 8.977e-46
Identity = 110/221 (49.77%), Postives = 132/221 (59.73%), Query Frame = 3

Query:  117 MLFGVRVVVDSMRKSVSMNNLSQYEQSQXXXXXXXXXXXXXXXXXXXXXXXXXVPNNSGRNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSAIPMEEDQV-KNQDSVSQVQPMCPAAPETRKSNGFPFMSVYHLGVD--------ESPMEELTLGQGNAKQSFTTNLFNPIP 752
            MLFGVRV VDSMRKSVS+NNLSQYEQ                             ++SG   +RERKRG+PWTEEEHKLFLVGLQKVGKGDWRGISRN+VKTRTPTQVASHAQKYF               FDIT +SV+A+PMEE+QV  +Q++  Q Q       +T    GFP +  + + ++        ++PME LTLGQ +      T L  PIP
Sbjct:   36 MLFGVRVTVDSMRKSVSLNNLSQYEQPH------ESSNADATPAAGYVSADDMAHHSSG---NRERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNLNRRRRRSSLFDITIESVTAVPMEEEQVLHHQENTPQSQQSPKTFSDTGSGGGFPVVPAFPMPINPVVVPVPIQNPMENLTLGQNDV----NTRLVRPIP 243

[Close]

BLAST of GT623988 vs. SwissProt
Match: MYBJ_DICDI (Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 6.949e-8
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 3

Query:  330 WTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYF 464
            WT+EEH  FL G+Q  GKG W+ I++ +V TRTPTQ+ SHAQKY+
Sbjct:  379 WTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYY 422

[Close]

BLAST of GT623988 vs. SwissProt
Match: MYBI_DICDI (Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 5.883e-7
Identity = 27/55 (49.09%), Postives = 35/55 (63.64%), Query Frame = 3

Query:  300 RDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYF 464
            +  ++K+   WT EEH  F+  L K G  D + IS+ YV TR PTQV +HAQKYF
Sbjct:  165 QSEKKKQSRYWTPEEHSRFIEALSKYGHKDVKSISQ-YVSTRNPTQVRTHAQKYF 218

[Close]

BLAST of GT623988 vs. TAIR peptide
Match: AT1G74840.1 (| Symbols: | Homeodomain-like superfamily protein | chr1:28116201-28117317 REVERSE LENGTH=265)

HSP 1 Score: 159.844 bits (403), Expect = 1.656e-39
Identity = 107/236 (45.34%), Postives = 129/236 (54.66%), Query Frame = 3

Query:   72 STMSSASPAAVSG-----EFMLFGVRVVVDSMRKSVSMNNLSQYEQSQXXXXXXXXXXXXXXXXXXXXXXXXX---VPNNSGRNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSAIPMEED-QVKNQDSVSQVQPMCPAAPETRKSNGFPFMSVYHLGVDESPMEELTLGQGNAKQSFTTNLFNPIP 752
            ST SS S  A +G     E MLFGVRVV+D MRK VS+NNLS YEQ+                             +P +S  N   ERKRG+PWTEEEHKLFL+GLQ+VGKGDW+GISRN+VKTRT TQVASHAQKYF               FD+TTD+V  IPMEED QV  Q++ SQ        PE    +  P M V+       P   +  G  +  Q  ++NL N +P
Sbjct:    5 STSSSESTTACAGSGTRREIMLFGVRVVLDPMRKCVSLNNLSDYEQTAETPKIDGEDRDEQDMNKTPAGYASADEALPMSSS-NGKIERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYFLRRSNLNRRRRRSSLFDMTTDTV--IPMEEDHQVLIQENTSQ---SSSPVPEINNFSIHPVMQVF-------PEFPVPTGNQSYGQLTSSNLINLVP 227

[Close]

BLAST of GT623988 vs. TAIR peptide
Match: AT1G74840.2 (| Symbols: | Homeodomain-like superfamily protein | chr1:28116201-28117317 REVERSE LENGTH=239)

HSP 1 Score: 158.303 bits (399), Expect = 4.818e-39
Identity = 107/236 (45.34%), Postives = 128/236 (54.24%), Query Frame = 3

Query:   72 STMSSASPAAVSG-----EFMLFGVRVVVDSMRKSVSMNNLSQYEQSQXXXXXXXXXXXXXXXXXXXXXXXXX---VPNNSGRNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSAIPMEED-QVKNQDSVSQVQPMCPAAPETRKSNGFPFMSVYHLGVDESPMEELTLGQGNAKQSFTTNLFNPIP 752
            ST SS S  A +G     E MLFGVRVV+D MRK VS+NNLS YEQ+                             +P +S  N   ERKRG+PWTEEEHKLFL+GLQ+VGKGDW+GISRN+VKTRT TQVASHAQKYF               FD+TTD+V  IPMEED QV  Q++ SQ        PE    +  P M V+       P   +  G  +  Q  ++NL  P P
Sbjct:    5 STSSSESTTACAGSGTRREIMLFGVRVVLDPMRKCVSLNNLSDYEQTAETPKIDGEDRDEQDMNKTPAGYASADEALPMSSS-NGKIERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYFLRRSNLNRRRRRSSLFDMTTDTV--IPMEEDHQVLIQENTSQ---SSSPVPEINNFSIHPVMQVF-------PEFPVPTGNQSYGQLTSSNLNEPSP 227

[Close]

BLAST of GT623988 vs. TAIR peptide
Match: AT1G19000.2 (| Symbols: | Homeodomain-like superfamily protein | chr1:6561335-6562684 REVERSE LENGTH=285)

HSP 1 Score: 145.976 bits (367), Expect = 2.474e-35
Identity = 89/208 (42.79%), Postives = 108/208 (51.92%), Query Frame = 3

Query:   72 STMSSASPAAVSG---EFMLFGVRVVVDSMRKSVSMNNLSQYEQSQXXXXXXXXXXXXXXXXXXXXXXXXXVPNNSGRNRDRE----------RKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSAIPMEEDQVKNQDSVSQVQPMCPAAPETRKSNGFPFMSVY 656
            S+ S      V+G   E MLFGVRVVVD MRK VS+NNLS YE+S                          V    G     +          RKRG+PWTE EHK FL+GLQKVGKGDW+GISRN+VK+RTPTQVASHAQKYF               FDITT++V+ + ME+D  +    +          PET  S+G   M V+
Sbjct:    5 SSSSETGDCGVTGKRDEIMLFGVRVVVDPMRKCVSLNNLSDYEKSSPEDEIPKIVTAGAGDGEDKNETDATVIVADGYASANDAVQISSSSGGRKRGVPWTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPTQVASHAQKYFLRRTNLNRRRRRSSLFDITTETVTEMAMEQDPTQENSPL----------PETNISSGQQAMQVF 202

[Close]

BLAST of GT623988 vs. TAIR peptide
Match: AT1G19000.1 (| Symbols: | Homeodomain-like superfamily protein | chr1:6561335-6562684 REVERSE LENGTH=285)

HSP 1 Score: 145.976 bits (367), Expect = 2.474e-35
Identity = 89/208 (42.79%), Postives = 108/208 (51.92%), Query Frame = 3

Query:   72 STMSSASPAAVSG---EFMLFGVRVVVDSMRKSVSMNNLSQYEQSQXXXXXXXXXXXXXXXXXXXXXXXXXVPNNSGRNRDRE----------RKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSAIPMEEDQVKNQDSVSQVQPMCPAAPETRKSNGFPFMSVY 656
            S+ S      V+G   E MLFGVRVVVD MRK VS+NNLS YE+S                          V    G     +          RKRG+PWTE EHK FL+GLQKVGKGDW+GISRN+VK+RTPTQVASHAQKYF               FDITT++V+ + ME+D  +    +          PET  S+G   M V+
Sbjct:    5 SSSSETGDCGVTGKRDEIMLFGVRVVVDPMRKCVSLNNLSDYEKSSPEDEIPKIVTAGAGDGEDKNETDATVIVADGYASANDAVQISSSSGGRKRGVPWTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPTQVASHAQKYFLRRTNLNRRRRRSSLFDITTETVTEMAMEQDPTQENSPL----------PETNISSGQQAMQVF 202

[Close]

BLAST of GT623988 vs. TAIR peptide
Match: AT1G70000.2 (| Symbols: | myb-like transcription factor family protein | chr1:26363674-26364635 REVERSE LENGTH=261)

HSP 1 Score: 141.354 bits (355), Expect = 6.095e-34
Identity = 86/173 (49.71%), Postives = 99/173 (57.23%), Query Frame = 3

Query:  117 MLFGVRVVVDS---MRKSVSMNNLSQYEQSQXXXXXXXXXXXXXXXXXXXXXXXXXVPNNSGRNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSAIPMEEDQVKNQDSVSQVQPMCPAAPETRK 626
            MLFGVRV   S    RKSVSMNNLSQ++Q+                          V + SGRNR  ERKRG PWTEEEH+LFL GL KVGKGDWRGISRN+VKTRTPTQVASHAQKYF               FDIT DS      EE+Q++    + +  P+    P +RK
Sbjct:   39 MLFGVRVTEASSSCFRKSVSMNNLSQFDQTPDPNPTDDGGYASDD-----------VVHASGRNR--ERKRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQNRRRRRSSLFDITPDSFIGSSKEENQLQTPLELIRPVPIPIPIPPSRK 198

[Close]

BLAST of GT623988 vs. TAIR peptide
Match: AT1G70000.1 (| Symbols: | myb-like transcription factor family protein | chr1:26363674-26364635 REVERSE LENGTH=261)

HSP 1 Score: 141.354 bits (355), Expect = 6.095e-34
Identity = 86/173 (49.71%), Postives = 99/173 (57.23%), Query Frame = 3

Query:  117 MLFGVRVVVDS---MRKSVSMNNLSQYEQSQXXXXXXXXXXXXXXXXXXXXXXXXXVPNNSGRNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSAIPMEEDQVKNQDSVSQVQPMCPAAPETRK 626
            MLFGVRV   S    RKSVSMNNLSQ++Q+                          V + SGRNR  ERKRG PWTEEEH+LFL GL KVGKGDWRGISRN+VKTRTPTQVASHAQKYF               FDIT DS      EE+Q++    + +  P+    P +RK
Sbjct:   39 MLFGVRVTEASSSCFRKSVSMNNLSQFDQTPDPNPTDDGGYASDD-----------VVHASGRNR--ERKRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQNRRRRRSSLFDITPDSFIGSSKEENQLQTPLELIRPVPIPIPIPPSRK 198

[Close]

BLAST of GT623988 vs. TAIR peptide
Match: AT5G47390.1 (| Symbols: | myb-like transcription factor family protein | chr5:19227001-19228546 FORWARD LENGTH=365)

HSP 1 Score: 129.413 bits (324), Expect = 2.397e-30
Identity = 74/170 (43.53%), Postives = 90/170 (52.94%), Query Frame = 3

Query:  120 LFGVRVVVDSMRKSVSMNNLSQYEQSQXXXXXXXXXXXXXXXXXXXXXXXXXVPNN---SGRNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSAIPME-----------EDQVKNQDSVSQ 587
            LFGVR+   S+RKS SM NLS Y  S                            +    +G +  RERK+G PWTEEEH++FL+GLQK+GKGDWRGISRNYV TRTPTQVASHAQKYF               FD+  D V  IPM+           E +++  DS+ Q
Sbjct:   25 LFGVRLTEGSIRKSASMGNLSHYTGSGSGGHGTGSNTPGSPGDVPDHVAGDGYASEDFVAGSSSSRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDMVPDEVGDIPMDLQEPEEDNIPVETEMQGADSIHQ 194

[Close]

BLAST of GT623988 vs. TAIR peptide
Match: AT3G16350.1 (| Symbols: | Homeodomain-like superfamily protein | chr3:5547828-5549397 FORWARD LENGTH=387)

HSP 1 Score: 117.087 bits (292), Expect = 1.231e-26
Identity = 58/99 (58.59%), Postives = 69/99 (69.70%), Query Frame = 3

Query:  297 NRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSV--SAIPMEEDQVKNQDSVSQ 587
            +R  ERKRG+PWTEEEH+LFLVGLQK+GKGDWRGISRNYV +RTPTQVASHAQKYF               FD+ TD +   + P +E+Q  N  S S+
Sbjct:  128 HRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHAQKYFIRHTSSSRRKRRSSLFDMVTDEMVTDSSPTQEEQTLNGSSPSK 226

[Close]

BLAST of GT623988 vs. TAIR peptide
Match: AT5G58900.1 (| Symbols: | Homeodomain-like transcriptional regulator | chr5:23783275-23784667 REVERSE LENGTH=288)

HSP 1 Score: 106.301 bits (264), Expect = 2.173e-23
Identity = 50/81 (61.73%), Postives = 59/81 (72.84%), Query Frame = 3

Query:  282 NNSGRNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITT 524
            + +GR+ + ERK+G+PWTEEEHKLFL+GL+K GKGDWR ISRN+V TRTPTQVASHAQKYF                DITT
Sbjct:  127 SQAGRSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITT 207

[Close]

BLAST of GT623988 vs. TAIR peptide
Match: AT1G49010.1 (| Symbols: | Duplicated homeodomain-like superfamily protein | chr1:18132714-18133778 FORWARD LENGTH=314)

HSP 1 Score: 102.834 bits (255), Expect = 2.402e-22
Identity = 53/109 (48.62%), Postives = 68/109 (62.39%), Query Frame = 3

Query:  285 NSGRNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITT-----DSVSAIPMEEDQVKNQDSVSQVQP 596
            + G   ++ER++GIPWTEEEH+LFL+GL K GKGDWR ISRN+V +RTPTQVASHAQKYF                DITT      +V+    +   VK++ +  Q QP
Sbjct:  121 SGGSRAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITTVNNQAPAVTGGGQQPQVVKHRPAQPQPQP 229

The following BLAST results are available for this feature:

BLAST of GT623988 vs. TrEMBL
BLAST of GT623988 vs. SwissProt
BLAST of GT623988 vs. TAIR peptide

BLAST of GT623988 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D5FFG4_MEDTR	1.566e-82	71.24	MYB transcription factor MYB2 OS=Medicago truncatu...	[more]
Q0PJH8_SOYBN	8.082e-63	58.51	MYB transcription factor MYB176 OS=Glycine max GN=...	[more]
Q0PJH9_SOYBN	6.841e-62	55.56	MYB transcription factor MYB173 OS=Glycine max GN=...	[more]
Q0PJI1_SOYBN	5.421e-59	56.72	MYB transcription factor MYB143 OS=Glycine max GN=...	[more]
Q0PJI2_SOYBN	3.514e-58	58.33	MYB transcription factor MYB183 OS=Glycine max GN=...	[more]
Q84UB0_MALXI	3.763e-52	50.42	Transcription factor Myb1 OS=Malus xiaojinensis PE...	[more]
A7UMB2_ROSHC	7.846e-50	49.57	Myb transcription factor OS=Rosa hybrid cultivar G...	[more]
A5C7A7_VITVI	9.591e-48	51.58	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D3Y3F5_9ROSI	4.029e-46	49.11	MYB transcription factor 1 OS=Vitis pseudoreticula...	[more]
D3Y3F6_9ROSI	8.977e-46	49.77	MYB transcription factor 2 OS=Vitis pseudoreticula...	[more]

BLAST of GT623988 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 2


Match Name	E-value	Identity	Description
MYBJ_DICDI	6.949e-8	60.00	Myb-like protein J OS=Dictyostelium discoideum GN=...	[more]
MYBI_DICDI	5.883e-7	49.09	Myb-like protein I OS=Dictyostelium discoideum GN=...	[more]

BLAST of GT623988 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT1G74840.1	1.656e-39	45.34	\| Symbols: \| Homeodomain-like superfamily protein...	[more]
AT1G74840.2	4.818e-39	45.34	\| Symbols: \| Homeodomain-like superfamily protein...	[more]
AT1G19000.2	2.474e-35	42.79	\| Symbols: \| Homeodomain-like superfamily protein...	[more]
AT1G19000.1	2.474e-35	42.79	\| Symbols: \| Homeodomain-like superfamily protein...	[more]
AT1G70000.2	6.095e-34	49.71	\| Symbols: \| myb-like transcription factor family...	[more]
AT1G70000.1	6.095e-34	49.71	\| Symbols: \| myb-like transcription factor family...	[more]
AT5G47390.1	2.397e-30	43.53	\| Symbols: \| myb-like transcription factor family...	[more]
AT3G16350.1	1.231e-26	58.59	\| Symbols: \| Homeodomain-like superfamily protein...	[more]
AT5G58900.1	2.173e-23	61.73	\| Symbols: \| Homeodomain-like transcriptional reg...	[more]
AT1G49010.1	2.402e-22	48.62	\| Symbols: \| Duplicated homeodomain-like superfam...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 10..23 score
None	No IPR available	SEG	seg	seg	coord: 1..18 score: NAcoord: 67..91 score: NAcoord: 155..169 score: NAcoord: 256..271 score
None	No IPR available	SEG	seg	seg	coord: 52..64 score
None	No IPR available	SEG	seg	seg	coord: 48..59 score
None	No IPR available	SEG	seg	seg	coord: 115..133 score
IPR001005	SANT domain, DNA binding	SMART	SM00717	no description	coord: 106..156 score: 4.6
IPR006447	Myb-like DNA-binding domain, SHAQKYF class	TIGRFAMs	TIGR01557	myb_SHAQKYF: myb-like DNA-binding domain,	coord: 105..157 score: 3.7
IPR009057	Homeodomain-like	SUPERFAMILY	46689	Homeodomain-like	coord: 101..161 score: 1.2
IPR012287	Homeodomain-related	GENE3D	1.10.10.60	no description	coord: 109..154 score: 1.4
IPR014778	Myb, DNA-binding	PFAM	PF00249	Myb_DNA-binding	coord: 109..153 score: 7.7
IPR017930	HTH transcriptional regulator, Myb-type, DNA-binding	PROFILE	PS51294	HTH_MYB	coord: 102..158 score: 17

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT623988 ID=GT623988; Name=GT623988; organism=Lens culinaris; type=EST; length=833bp
GTCACCACTCACTCGTTTTCGTCCGATTCCGATTCCACCGAGTCCAATTT
CTTCTAGAATCATCGCTTGATTCGACTATGTCTTCTGCCTCCCCCGCCGC
CGTTTCCGGCGAATTCATGCTGTTTGGAGTTAGAGTTGTGGTTGATTCCA
TGAGGAAGAGTGTTAGCATGAACAATCTCTCACAGTACGAACAATCTCAA
GACAACAACAACGGTATCAAGGACGATAATAACAAAGACGCTCTCGCCGC
TGGTTATGCCTCTGCTGACGACGCCGTTCCGAATAACTCCGGCAGGAACC
GTGACCGCGAGCGTAAACGAGGAATTCCATGGACGGAGGAAGAGCACAAG
CTGTTCTTGGTTGGATTGCAGAAAGTAGGGAAAGGTGATTGGAGAGGAAT
CTCCAGGAACTACGTGAAAACACGCACGCCTACTCAGGTTGCGAGCCATG
CTCAGAAGTATTTTCTCCGGCGAAGTAATCTCAATCGCCGTCGCCGTAGA
TCTAGTCTCTTTGATATCACAACCGATTCGGTGTCTGCAATTCCAATGGA
GGAAGATCAGGTGAAGAATCAAGACAGTGTTTCACAAGTACAGCCCATGT
GCCCCGCAGCCCCTGAAACTAGAAAAAGCAATGGATTTCCTTTTATGTCA
GTATATCATTTGGGTGTTGATGAGAGTCCAATGGAAGAACTCACTCTAGG
ACAAGGAAATGCGAAACAAAGTTTCACAACCAATCTATTCAACCCAATTC
CTTTTGTTGTTTCAGATTCTAAAGCTTCCACTGTCTCTGATATCACATCT
AGTTCAAGTTCATCTATTGAACCTCCACACTTT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0045449	regulation of transcription

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR006447	Myb_dom_plants
IPR009057	Homeobox-like_sf
IPR012287	Homeodomain-related
IPR014778	Myb, DNA-binding
IPR017930	Myb_dom

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