GT624417

EST Overview


Name	GT624417
Unique Name	GT624417
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	796

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03

Homology

[Close]

BLAST of GT624417 vs. TrEMBL
Match: Q0D6I0_ORYSJ (Os07g0477500 protein OS=Oryza sativa subsp. japonica GN=Os07g0477500 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.313e-32
Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 3

Query:  507 RFVYLQKGGGTIDLEPCLTHTSTIEPTLAPVAVERTMTTRAAAS 638
            R   ++KGGGTIDLEP L+HTS +EPTLAPVAVERTMTTRAAAS
Sbjct:  577 RCCIVKKGGGTIDLEPRLSHTSAVEPTLAPVAVERTMTTRAAAS 620

HSP 2 Score: 58.5362 bits (140), Expect = 1.313e-32
Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = 3

Query:  120 TERYMFDVCIGTVLIHTGYCRLTASQPPAAIQELRTTIRVLPPKD 254
            T+ Y  D  +  VL+HTGYC  T+S PP+AIQELR T+RVLPP+D
Sbjct:  506 TDIYTNDSDLVAVLMHTGYCSPTSSPPPSAIQELRATVRVLPPQD 550

HSP 3 Score: 55.4546 bits (132), Expect = 1.313e-32
Identity = 26/32 (81.25%), Postives = 27/32 (84.38%), Query Frame = 2

Query:  350 YISTLRNNVRSRTWGGAANGCSYRIERCCIVK 445
            Y STLRNNVRSR WG A  GCS+RIERCCIVK
Sbjct:  552 YTSTLRNNVRSRAWG-AGIGCSFRIERCCIVK 582

[Close]

BLAST of GT624417 vs. TrEMBL
Match: B8B602_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25979 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.313e-32
Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 3

Query:  507 RFVYLQKGGGTIDLEPCLTHTSTIEPTLAPVAVERTMTTRAAAS 638
            R   ++KGGGTIDLEP L+HTS +EPTLAPVAVERTMTTRAAAS
Sbjct:  577 RCCIVKKGGGTIDLEPRLSHTSAVEPTLAPVAVERTMTTRAAAS 620

HSP 2 Score: 58.5362 bits (140), Expect = 1.313e-32
Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = 3

Query:  120 TERYMFDVCIGTVLIHTGYCRLTASQPPAAIQELRTTIRVLPPKD 254
            T+ Y  D  +  VL+HTGYC  T+S PP+AIQELR T+RVLPP+D
Sbjct:  506 TDIYTNDSDLVAVLMHTGYCSPTSSPPPSAIQELRATVRVLPPQD 550

HSP 3 Score: 55.4546 bits (132), Expect = 1.313e-32
Identity = 26/32 (81.25%), Postives = 27/32 (84.38%), Query Frame = 2

Query:  350 YISTLRNNVRSRTWGGAANGCSYRIERCCIVK 445
            Y STLRNNVRSR WG A  GCS+RIERCCIVK
Sbjct:  552 YTSTLRNNVRSRAWG-AGIGCSFRIERCCIVK 582

[Close]

BLAST of GT624417 vs. TrEMBL
Match: B9FX69_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_24225 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.314e-32
Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 3

Query:  507 RFVYLQKGGGTIDLEPCLTHTSTIEPTLAPVAVERTMTTRAAAS 638
            R   ++KGGGTIDLEP L+HTS +EPTLAPVAVERTMTTRAAAS
Sbjct:  560 RCCIVKKGGGTIDLEPRLSHTSAVEPTLAPVAVERTMTTRAAAS 603

HSP 2 Score: 58.5362 bits (140), Expect = 1.314e-32
Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = 3

Query:  120 TERYMFDVCIGTVLIHTGYCRLTASQPPAAIQELRTTIRVLPPKD 254
            T+ Y  D  +  VL+HTGYC  T+S PP+AIQELR T+RVLPP+D
Sbjct:  489 TDIYTNDSDLVAVLMHTGYCSPTSSPPPSAIQELRATVRVLPPQD 533

HSP 3 Score: 55.4546 bits (132), Expect = 1.314e-32
Identity = 26/32 (81.25%), Postives = 27/32 (84.38%), Query Frame = 2

Query:  350 YISTLRNNVRSRTWGGAANGCSYRIERCCIVK 445
            Y STLRNNVRSR WG A  GCS+RIERCCIVK
Sbjct:  535 YTSTLRNNVRSRAWG-AGIGCSFRIERCCIVK 565

[Close]

BLAST of GT624417 vs. TrEMBL
Match: C5YKL2_SORBI (Putative uncharacterized protein Sb07g019350 OS=Sorghum bicolor GN=Sb07g019350 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.739e-32
Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 3

Query:  507 RFVYLQKGGGTIDLEPCLTHTSTIEPTLAPVAVERTMTTRAAAS 638
            R   ++KGGGTIDLEP L+HTS +EPTLAPVAVERTMTTRAAAS
Sbjct:  577 RCCIVKKGGGTIDLEPRLSHTSAVEPTLAPVAVERTMTTRAAAS 620

HSP 2 Score: 56.9954 bits (136), Expect = 3.739e-32
Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 3

Query:  120 TERYMFDVCIGTVLIHTGYCRLTASQPPAAIQELRTTIRVLPPKD 254
            T+ Y  D  +  VL+HTGYC  T+S PP+AIQELR T+RVLPP++
Sbjct:  506 TDVYTNDSDLVAVLMHTGYCSPTSSPPPSAIQELRATVRVLPPQE 550

HSP 3 Score: 55.4546 bits (132), Expect = 3.739e-32
Identity = 26/32 (81.25%), Postives = 27/32 (84.38%), Query Frame = 2

Query:  350 YISTLRNNVRSRTWGGAANGCSYRIERCCIVK 445
            Y STLRNNVRSR WG A  GCS+RIERCCIVK
Sbjct:  552 YTSTLRNNVRSRAWG-AGIGCSFRIERCCIVK 582

[Close]

BLAST of GT624417 vs. TrEMBL
Match: C5WMW0_SORBI (Putative uncharacterized protein Sb01g050500 OS=Sorghum bicolor GN=Sb01g050500 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.030e-31
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 3

Query:  507 RFVYLQKGGGTIDLEPCLTHTSTIEPTLAPVAVERTMTTRAAAS 638
            R   ++KGGGTIDLEP L+HTS +EPTLAPV VERTMTTRAAAS
Sbjct:  578 RCCIVKKGGGTIDLEPRLSHTSAVEPTLAPVVVERTMTTRAAAS 621

HSP 2 Score: 56.9954 bits (136), Expect = 3.030e-31
Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 3

Query:  120 TERYMFDVCIGTVLIHTGYCRLTASQPPAAIQELRTTIRVLPPKD 254
            T+ Y  D  +  VL+HTGYC  T+S PP+AIQELR T+RVLPP++
Sbjct:  507 TDIYTNDSDLVAVLMHTGYCSPTSSPPPSAIQELRATVRVLPPQE 551

HSP 3 Score: 53.9138 bits (128), Expect = 3.030e-31
Identity = 25/32 (78.12%), Postives = 27/32 (84.38%), Query Frame = 2

Query:  350 YISTLRNNVRSRTWGGAANGCSYRIERCCIVK 445
            Y STLRNNVRSR WG A  GCS++IERCCIVK
Sbjct:  553 YTSTLRNNVRSRAWG-AGIGCSFQIERCCIVK 583

[Close]

BLAST of GT624417 vs. TrEMBL
Match: B7ZX10_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.137e-30
Identity = 33/44 (75.00%), Postives = 36/44 (81.82%), Query Frame = 3

Query:  507 RFVYLQKGGGTIDLEPCLTHTSTIEPTLAPVAVERTMTTRAAAS 638
            R    +KGGGTI LEP L+H S +EPTLAPVAVERTMTTRAAAS
Sbjct:  577 RCCIFKKGGGTIGLEPRLSHVSAVEPTLAPVAVERTMTTRAAAS 620

HSP 2 Score: 56.9954 bits (136), Expect = 4.137e-30
Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 3

Query:  120 TERYMFDVCIGTVLIHTGYCRLTASQPPAAIQELRTTIRVLPPKD 254
            T+ Y  D  +  VL+HTGYC  T+S PP+AIQELR T+RVLPP++
Sbjct:  506 TDIYTNDSDLVAVLMHTGYCSPTSSPPPSAIQELRATVRVLPPQE 550

HSP 3 Score: 53.5286 bits (127), Expect = 4.137e-30
Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 2

Query:  350 YISTLRNNVRSRTWGGAANGCSYRIERCCIVK 445
            Y STLRNNVRSR WG A  GCS+RIERCCI K
Sbjct:  552 YTSTLRNNVRSRAWG-AGIGCSFRIERCCIFK 582

[Close]

BLAST of GT624417 vs. TrEMBL
Match: C5WME3_SORBI (Putative uncharacterized protein Sb01g037225 (Fragment) OS=Sorghum bicolor GN=Sb01g037225 PE=4 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 1.636e-23
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 3

Query:  120 TERYMFDVCIGTVLIHTGYCRLTASQPPAAIQELRTTIRVLPPKD 254
            T+ Y  D  +  VL+HTGY   T+S PP+ IQELR T+RVLPP+D
Sbjct:   67 TDIYTNDSDLVAVLMHTGYYSPTSSAPPSTIQELRATVRVLPPQD 111

HSP 2 Score: 52.373 bits (124), Expect = 1.636e-23
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 3

Query:  507 RFVYLQKGGGTIDLEPCLTHTSTIEPTLAPVAVE 608
            R   ++KGGGTIDLEP L+HTS +EPTLAPV VE
Sbjct:  138 RCCIVKKGGGTIDLEPRLSHTSAVEPTLAPVVVE 171

HSP 3 Score: 49.6766 bits (117), Expect = 1.636e-23
Identity = 24/32 (75.00%), Postives = 25/32 (78.12%), Query Frame = 2

Query:  350 YISTLRNNVRSRTWGGAANGCSYRIERCCIVK 445
            Y STLRNNVRSR W GA   CS+ IERCCIVK
Sbjct:  113 YTSTLRNNVRSRAW-GARVSCSFWIERCCIVK 143

[Close]

BLAST of GT624417 vs. TrEMBL
Match: D7M1D8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_350108 PE=4 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 1.578e-22
Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = 1

Query:    1 TNRQVRGGQLWGTDVYTYDSDLVAGIC 81
            TNRQVRGGQLWGTD+YT DSDLVAG C
Sbjct:  603 TNRQVRGGQLWGTDIYTDDSDLVAGYC 629

HSP 2 Score: 48.9062 bits (115), Expect = 1.578e-22
Identity = 23/32 (71.88%), Postives = 25/32 (78.12%), Query Frame = 2

Query:  350 YISTLRNNVRSRTWGGAANGCSYRIERCCIVK 445
            Y S LRNNVRSR WG A  GCSYR+ERC I+K
Sbjct:  656 YTSKLRNNVRSRAWG-AGIGCSYRVERCYILK 686

HSP 3 Score: 46.595 bits (109), Expect = 1.578e-22
Identity = 21/28 (75.00%), Postives = 23/28 (82.14%), Query Frame = 3

Query:  171 GYCRLTASQPPAAIQELRTTIRVLPPKD 254
            GYCR TAS PP  +QELRTTIRVLP +D
Sbjct:  627 GYCRPTASPPPPTMQELRTTIRVLPSQD 654

HSP 4 Score: 49.6766 bits (117), Expect = 1.007e-20
Identity = 21/24 (87.50%), Postives = 22/24 (91.67%), Query Frame = 1

Query:   10 QVRGGQLWGTDVYTYDSDLVAGIC 81
            QVRGGQLWGTD+YT DSDLVAG C
Sbjct:  812 QVRGGQLWGTDIYTDDSDLVAGYC 835

HSP 5 Score: 48.9062 bits (115), Expect = 1.007e-20
Identity = 23/32 (71.88%), Postives = 25/32 (78.12%), Query Frame = 2

Query:  350 YISTLRNNVRSRTWGGAANGCSYRIERCCIVK 445
            Y S LRNNVRSR WG A  GCSYR+ERC I+K
Sbjct:  862 YTSKLRNNVRSRAWG-AGIGCSYRVERCYILK 892

HSP 6 Score: 46.595 bits (109), Expect = 1.007e-20
Identity = 21/28 (75.00%), Postives = 23/28 (82.14%), Query Frame = 3

Query:  171 GYCRLTASQPPAAIQELRTTIRVLPPKD 254
            GYCR TAS PP  +QELRTTIRVLP +D
Sbjct:  833 GYCRPTASPPPPTMQELRTTIRVLPSQD 860

HSP 7 Score: 72.4034 bits (176), Expect = 5.059e-11
Identity = 35/48 (72.92%), Postives = 41/48 (85.42%), Query Frame = 3

Query:  495 YLTVRFVYLQKGGGTIDLEPCLTHTSTIEPTLAPVAVERTMTTRAAAS 638
            Y   R   L+KGGGTI+LEP LTH+ST+EPTLAP+AVER+MTTRAAAS
Sbjct:  677 YRVERCYILKKGGGTIELEPSLTHSSTVEPTLAPMAVERSMTTRAAAS 724

HSP 8 Score: 60.8474 bits (146), Expect = 1.523e-7
Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = 3

Query:  495 YLTVRFVYLQKGGGTIDLEPCLTHTSTIEPTLAPVAVERTMTTRAAAS 638
            Y   R   L+KGGGTI+LEP LTH+ST+EPTLAP+A    MTTRAAAS
Sbjct:  883 YRVERCYILKKGGGTIELEPSLTHSSTVEPTLAPMA----MTTRAAAS 926

[Close]

BLAST of GT624417 vs. TrEMBL
Match: Q9FT90_ARATH (Putative uncharacterized protein F8L15_180 OS=Arabidopsis thaliana GN=F8L15_180 PE=4 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 1.586e-22
Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = 1

Query:    1 TNRQVRGGQLWGTDVYTYDSDLVAGIC 81
            TNRQVRGGQLWGTD+YT DSDLVAG C
Sbjct:  634 TNRQVRGGQLWGTDIYTDDSDLVAGYC 660

HSP 2 Score: 48.9062 bits (115), Expect = 1.586e-22
Identity = 23/32 (71.88%), Postives = 25/32 (78.12%), Query Frame = 2

Query:  350 YISTLRNNVRSRTWGGAANGCSYRIERCCIVK 445
            Y S LRNNVRSR WG A  GCSYR+ERC I+K
Sbjct:  687 YTSKLRNNVRSRAWG-AGIGCSYRVERCYILK 717

HSP 3 Score: 46.595 bits (109), Expect = 1.586e-22
Identity = 21/28 (75.00%), Postives = 23/28 (82.14%), Query Frame = 3

Query:  171 GYCRLTASQPPAAIQELRTTIRVLPPKD 254
            GYCR TAS PP  +QELRTTIRVLP +D
Sbjct:  658 GYCRPTASPPPPTMQELRTTIRVLPSQD 685

HSP 4 Score: 72.4034 bits (176), Expect = 5.059e-11
Identity = 35/48 (72.92%), Postives = 41/48 (85.42%), Query Frame = 3

Query:  495 YLTVRFVYLQKGGGTIDLEPCLTHTSTIEPTLAPVAVERTMTTRAAAS 638
            Y   R   L+KGGGTI+LEP LTH+ST+EPTLAP+AVER+MTTRAAAS
Sbjct:  708 YRVERCYILKKGGGTIELEPSLTHSSTVEPTLAPMAVERSMTTRAAAS 755

[Close]

BLAST of GT624417 vs. TrEMBL
Match: D7TB35_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_130.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000253001 PE=4 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.121e-20
Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 3

Query:  120 TERYMFDVCIGTVLIHTGYCRLTASQPPAAIQELRTTIRVLPPKDC 257
            T+ Y  D  +  VL+HTGYCR TAS PP AIQELR TIRVLPP+DC
Sbjct:  204 TDIYTDDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC 249

HSP 2 Score: 60.077 bits (144), Expect = 1.121e-20
Identity = 28/32 (87.50%), Postives = 29/32 (90.62%), Query Frame = 2

Query:  350 YISTLRNNVRSRTWGGAANGCSYRIERCCIVK 445
            YISTLRNNVRSR WG AA GCSYR+ERCCIVK
Sbjct:  250 YISTLRNNVRSRAWG-AAIGCSYRVERCCIVK 280

HSP 3 Score: 80.8777 bits (198), Expect = 1.422e-13
Identity = 39/48 (81.25%), Postives = 42/48 (87.50%), Query Frame = 3

Query:  495 YLTVRFVYLQKGGGTIDLEPCLTHTSTIEPTLAPVAVERTMTTRAAAS 638
            Y   R   ++KGGGTIDLEPCLTHTST+EPTLAPVAVERTMTTRAAAS
Sbjct:  271 YRVERCCIVKKGGGTIDLEPCLTHTSTVEPTLAPVAVERTMTTRAAAS 318

[Close]

BLAST of GT624417 vs. TAIR peptide
Match: AT5G08450.3 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801 proteins in 1175 species: Archae - 64; Bacteria - 2390; Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses - 208; Other Eukaryotes - 10599 (source: NCBI BLink). | chr5:2727970-2732572 REVERSE LENGTH=918)

HSP 1 Score: 57.7658 bits (138), Expect = 2.106e-17
Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = 3

Query:  120 TERYMFDVCIGTVLIHTGYCRLTASQPPAAIQELRTTIRVLPPKD 254
            T+ Y  D  +  VL+HTGYCR TAS PP  +QELRTTIRVLP +D
Sbjct:  626 TDIYTDDSDLVAVLMHTGYCRPTASPPPPTMQELRTTIRVLPSQD 670

HSP 2 Score: 48.9062 bits (115), Expect = 2.106e-17
Identity = 23/32 (71.88%), Postives = 25/32 (78.12%), Query Frame = 2

Query:  350 YISTLRNNVRSRTWGGAANGCSYRIERCCIVK 445
            Y S LRNNVRSR WG A  GCSYR+ERC I+K
Sbjct:  672 YTSKLRNNVRSRAWG-AGIGCSYRVERCYILK 702

HSP 3 Score: 72.4034 bits (176), Expect = 3.253e-13
Identity = 35/48 (72.92%), Postives = 41/48 (85.42%), Query Frame = 3

Query:  495 YLTVRFVYLQKGGGTIDLEPCLTHTSTIEPTLAPVAVERTMTTRAAAS 638
            Y   R   L+KGGGTI+LEP LTH+ST+EPTLAP+AVER+MTTRAAAS
Sbjct:  693 YRVERCYILKKGGGTIELEPSLTHSSTVEPTLAPMAVERSMTTRAAAS 740

[Close]

BLAST of GT624417 vs. TAIR peptide
Match: AT5G08450.2 (| Symbols: | CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:2727970-2732572 REVERSE LENGTH=918)

HSP 1 Score: 57.7658 bits (138), Expect = 2.106e-17
Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = 3

Query:  120 TERYMFDVCIGTVLIHTGYCRLTASQPPAAIQELRTTIRVLPPKD 254
            T+ Y  D  +  VL+HTGYCR TAS PP  +QELRTTIRVLP +D
Sbjct:  626 TDIYTDDSDLVAVLMHTGYCRPTASPPPPTMQELRTTIRVLPSQD 670

HSP 2 Score: 48.9062 bits (115), Expect = 2.106e-17
Identity = 23/32 (71.88%), Postives = 25/32 (78.12%), Query Frame = 2

Query:  350 YISTLRNNVRSRTWGGAANGCSYRIERCCIVK 445
            Y S LRNNVRSR WG A  GCSYR+ERC I+K
Sbjct:  672 YTSKLRNNVRSRAWG-AGIGCSYRVERCYILK 702

HSP 3 Score: 72.4034 bits (176), Expect = 3.253e-13
Identity = 35/48 (72.92%), Postives = 41/48 (85.42%), Query Frame = 3

Query:  495 YLTVRFVYLQKGGGTIDLEPCLTHTSTIEPTLAPVAVERTMTTRAAAS 638
            Y   R   L+KGGGTI+LEP LTH+ST+EPTLAP+AVER+MTTRAAAS
Sbjct:  693 YRVERCYILKKGGGTIELEPSLTHSSTVEPTLAPMAVERSMTTRAAAS 740

[Close]

BLAST of GT624417 vs. TAIR peptide
Match: AT5G08450.1 (| Symbols: | CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801 proteins in 1175 species: Archae - 64; Bacteria - 2390; Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses - 208; Other Eukaryotes - 10599 (source: NCBI BLink). | chr5:2727970-2732572 REVERSE LENGTH=918)

HSP 1 Score: 57.7658 bits (138), Expect = 2.106e-17
Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = 3

Query:  120 TERYMFDVCIGTVLIHTGYCRLTASQPPAAIQELRTTIRVLPPKD 254
            T+ Y  D  +  VL+HTGYCR TAS PP  +QELRTTIRVLP +D
Sbjct:  626 TDIYTDDSDLVAVLMHTGYCRPTASPPPPTMQELRTTIRVLPSQD 670

HSP 2 Score: 48.9062 bits (115), Expect = 2.106e-17
Identity = 23/32 (71.88%), Postives = 25/32 (78.12%), Query Frame = 2

Query:  350 YISTLRNNVRSRTWGGAANGCSYRIERCCIVK 445
            Y S LRNNVRSR WG A  GCSYR+ERC I+K
Sbjct:  672 YTSKLRNNVRSRAWG-AGIGCSYRVERCYILK 702

HSP 3 Score: 72.4034 bits (176), Expect = 3.253e-13
Identity = 35/48 (72.92%), Postives = 41/48 (85.42%), Query Frame = 3

Query:  495 YLTVRFVYLQKGGGTIDLEPCLTHTSTIEPTLAPVAVERTMTTRAAAS 638
            Y   R   L+KGGGTI+LEP LTH+ST+EPTLAP+AVER+MTTRAAAS
Sbjct:  693 YRVERCYILKKGGGTIELEPSLTHSSTVEPTLAPMAVERSMTTRAAAS 740

The following BLAST results are available for this feature:

BLAST of GT624417 vs. TrEMBL
BLAST of GT624417 vs. TAIR peptide

BLAST of GT624417 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q0D6I0_ORYSJ	1.313e-32	79.55	Os07g0477500 protein OS=Oryza sativa subsp. japoni...	[more]
B8B602_ORYSI	1.313e-32	79.55	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B9FX69_ORYSJ	1.314e-32	79.55	Putative uncharacterized protein OS=Oryza sativa s...	[more]
C5YKL2_SORBI	3.739e-32	79.55	Putative uncharacterized protein Sb07g019350 OS=So...	[more]
C5WMW0_SORBI	3.030e-31	77.27	Putative uncharacterized protein Sb01g050500 OS=So...	[more]
B7ZX10_MAIZE	4.137e-30	75.00	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
C5WME3_SORBI	1.636e-23	55.56	Putative uncharacterized protein Sb01g037225 (Frag...	[more]
D7M1D8_ARALY	1.578e-22	88.89	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9FT90_ARATH	1.586e-22	88.89	Putative uncharacterized protein F8L15_180 OS=Arab...	[more]
D7TB35_VITVI	1.121e-20	67.39	Whole genome shotgun sequence of line PN40024, sca...	[more]

BLAST of GT624417 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G08450.3	2.106e-17	62.22	\| Symbols: \| FUNCTIONS IN: molecular_function unk...	[more]
AT5G08450.2	2.106e-17	62.22	\| Symbols: \| CONTAINS InterPro DOMAIN/s: Histone ...	[more]
AT5G08450.1	2.106e-17	62.22	\| Symbols: \| CONTAINS InterPro DOMAIN/s: Histone ...	[more]

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT624417 ID=GT624417; Name=GT624417; organism=Lens culinaris; type=EST; length=796bp
ACAAACCGTCAAGTCAGAGGTGGCCAGCTTTGGGGGACTGATGTGTACAC
GTATGACTCGGATCTTGTCGCTGGTATATGTCTTTTACAAAACTGATGGA
TTTGCTTGATATTGCATATACTGAAAGATACATGTTTGACGTCTGTATTG
GCACAGTTCTCATTCATACAGGTTACTGTCGCCTAACTGCATCTCAGCCT
CCTGCAGCCATACAAGAATTGCGCACAACCATTCGGGTGCTACCTCCAAA
AGATTGTATGCCCCCACAATATCACTATTATCTTTAATAGTTTCTTTCCT
TTACGTTTAAAGCTTCAATCTCAATTTTTTTAATCATGTAACCTCAGGCT
ATATTTCTACATTGAGGAACAATGTACGTTCCCGCACTTGGGGGGGTGCT
GCTAATGGTTGCAGTTATCGGATCGAACGGTGTTGCATTGTGAAGGTAGT
ATCAGACGACCTGCAAAATCTTCCTATCAATTTGTACAATGTAATATCTA
ACTGTTCGTTTTGTTTATCTTCAGAAAGGAGGTGGAACGATTGATCTTGA
ACCTTGCCTTACACATACATCAACTATTGAGCCCACCCTCGCTCCTGTGG
CTGTGGAGCGGACAATGACTACCAGGGCCGCAGCTTCGGTTTGTTTCAGC
ATCTAATAATAAGCAAAGATTTTTTTCCTCCGAAAAATATCATCAATAAC
TGTTTATGTTGTTTCATAGATGGAACTTGTTGGCACGTGCTTTAGTGCTT
CTCAATAATTTAAGCATGCATAACATTGATTTCTTAAAGATAAAGT

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