GT626503

EST Overview
NameGT626503
Unique NameGT626503
TypeEST
OrganismLens culinaris (lentil)
Sequence length571
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT626503 vs. TrEMBL
Match: B9S925_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0837910 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.802e-14
Identity = 43/62 (69.35%), Postives = 49/62 (79.03%), Query Frame = 3
Query:    3 PFSRSASDGYDASGGEDSDRVPTRIVDRPTTNWSNLLFNGDQDERGFETK-SSTSFVHNRKL 185
            P SRS SDGY+ASGGEDSDRVP+RIV R +TNW+NLLF  DQDE  F  K SS+S  +NRKL
Sbjct:  558 PLSRSTSDGYEASGGEDSDRVPSRIVQR-STNWNNLLFRPDQDEGVFRLKASSSSQANNRKL 618          
BLAST of GT626503 vs. TrEMBL
Match: B9HXN6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_769976 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.168e-12
Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 3
Query:    3 PFSRSASDGYDASGGEDSDRVPTRIVDRPTTNWSNLLFNGDQDERGFETK--SSTSFVHNRKL 185
            P SRS SDGY+ASGGEDSDRVP+RI  R + NWSNLLF+ D+DE  F  K  SS+S  +NR+L
Sbjct:  564 PLSRSTSDGYEASGGEDSDRVPSRIAQR-SDNWSNLLFHADRDETVFRMKASSSSSQANNREL 625          
BLAST of GT626503 vs. TrEMBL
Match: B9HIB3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1084793 PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.835e-11
Identity = 36/54 (66.67%), Postives = 41/54 (75.93%), Query Frame = 3
Query:    3 PFSRSASDGYDASGGEDSDRVPTRIVDRPTTNWSNLLFNGDQDERGFETKSSTS 164
            P SRS SDGY+ASGGEDSDRV +RI  R + NWSNLLF  DQDE  F  K+S+S
Sbjct:  546 PLSRSTSDGYEASGGEDSDRVSSRIAQR-SNNWSNLLFRADQDESVFRLKASSS 598          
BLAST of GT626503 vs. TrEMBL
Match: D7SXK6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_113.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012479001 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.711e-10
Identity = 35/54 (64.81%), Postives = 38/54 (70.37%), Query Frame = 3
Query:    3 PFSRSASDGYDASGGEDSDRVPTRIVDRPTTNWSNLLFNGDQDERGFETKSSTS 164
            P SRS SDGY+ASGGEDSDRVP+R V R  TNWSN LFN D  ER     +S S
Sbjct:  478 PLSRSTSDGYEASGGEDSDRVPSRTVHR-LTNWSNFLFNSDPVERVGTLNASAS 530          
BLAST of GT626503 vs. TrEMBL
Match: C5XD73_SORBI (Putative uncharacterized protein Sb02g038270 OS=Sorghum bicolor GN=Sb02g038270 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 5.526e-8
Identity = 27/40 (67.50%), Postives = 35/40 (87.50%), Query Frame = 3
Query:    9 SRSASDGYDASGGEDSDRVPTRIVDRPTTNWSNLLFNGDQ 128
            SRS SDGY+ASGGEDSDR+P+RIV R ++NW+N++ N DQ
Sbjct:  564 SRSTSDGYEASGGEDSDRIPSRIVHR-SSNWANIILNSDQ 602          
BLAST of GT626503 vs. TrEMBL
Match: B6SL30_MAIZE (Metal ion binding protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 5.526e-8
Identity = 27/42 (64.29%), Postives = 36/42 (85.71%), Query Frame = 3
Query:    9 SRSASDGYDASGGEDSDRVPTRIVDRPTTNWSNLLFNGDQDE 134
            SRS SDGY+ASGGEDSDR+P+RIV R ++NW++++ N DQ E
Sbjct:  565 SRSTSDGYEASGGEDSDRIPSRIVHR-SSNWASIILNSDQSE 605          
BLAST of GT626503 vs. TrEMBL
Match: C5WTP8_SORBI (Putative uncharacterized protein Sb01g043340 OS=Sorghum bicolor GN=Sb01g043340 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 9.426e-8
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 3
Query:    6 FSRSASDGYDASGGEDSDRVPTRIVDRPTTNWSNLLFNGDQ--DERGFETKSSTSFVHN 176
            F RS+SDGY+ASGGEDSDR+P+RIV R ++NW+N+  N  Q   +    T SS  F+ N
Sbjct:  502 FKRSSSDGYEASGGEDSDRIPSRIVHR-SSNWANVFLNSSQGGPQADLLTTSSEGFLVN 559          
BLAST of GT626503 vs. TrEMBL
Match: C0P908_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.100e-7
Identity = 26/40 (65.00%), Postives = 35/40 (87.50%), Query Frame = 3
Query:    9 SRSASDGYDASGGEDSDRVPTRIVDRPTTNWSNLLFNGDQ 128
            SRS SDGY+ASGGEDSDR+P+RIV R ++NW++++ N DQ
Sbjct:  287 SRSTSDGYEASGGEDSDRIPSRIVHR-SSNWASIILNSDQ 325          
BLAST of GT626503 vs. TrEMBL
Match: B6SXJ3_MAIZE (Metal ion binding protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.100e-7
Identity = 26/40 (65.00%), Postives = 35/40 (87.50%), Query Frame = 3
Query:    9 SRSASDGYDASGGEDSDRVPTRIVDRPTTNWSNLLFNGDQ 128
            SRS SDGY+ASGGEDSDR+P+RIV R ++NW++++ N DQ
Sbjct:  565 SRSTSDGYEASGGEDSDRIPSRIVHR-SSNWASIILNSDQ 603          
BLAST of GT626503 vs. TrEMBL
Match: Q8H055_ORYSJ (Putative DHHC-type zinc finger protein OS=Oryza sativa subsp. japonica GN=OSJNBa0014O06.17 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 6.110e-7
Identity = 26/41 (63.41%), Postives = 34/41 (82.93%), Query Frame = 3
Query:    6 FSRSASDGYDASGGEDSDRVPTRIVDRPTTNWSNLLFNGDQ 128
            FSRS SDGY+ASGGEDSDR+P+RIV R ++NW+N + +  Q
Sbjct:  532 FSRSTSDGYEASGGEDSDRIPSRIVHR-SSNWANAILSSGQ 571          
The following BLAST results are available for this feature:
BLAST of GT626503 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9S925_RICCO8.802e-1469.35Zinc finger protein, putative OS=Ricinus communis ... [more]
B9HXN6_POPTR2.168e-1263.49Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HIB3_POPTR1.835e-1166.67Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7SXK6_VITVI7.711e-1064.81Whole genome shotgun sequence of line PN40024, sca... [more]
C5XD73_SORBI5.526e-867.50Putative uncharacterized protein Sb02g038270 OS=So... [more]
B6SL30_MAIZE5.526e-864.29Metal ion binding protein OS=Zea mays PE=2 SV=1[more]
C5WTP8_SORBI9.426e-852.54Putative uncharacterized protein Sb01g043340 OS=So... [more]
C0P908_MAIZE2.100e-765.00Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
B6SXJ3_MAIZE2.100e-765.00Metal ion binding protein OS=Zea mays PE=2 SV=1[more]
Q8H055_ORYSJ6.110e-763.41Putative DHHC-type zinc finger protein OS=Oryza sa... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 23..34
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT626503 ID=GT626503; Name=GT626503; organism=Lens culinaris; type=EST; length=571bp
TTCCGTTTTCAAGATCAGCTAGTGATGGATATGACGCTTCTGGCGGCGAA
GACAGTGACAGGGTTCCAACAAGGATTGTTGATAGACCAACAACAAATTG
GAGTAATCTTCTTTTCAATGGTGATCAAGATGAGAGAGGTTTTGAAACGA
AATCATCAACTAGCTTTGTTCATAATAGAAAGTTGTGACCAAATTGATCA
TAATAGAAAGTTGTGACCAAATTGATCTATTGTTGGGAATTGTCCATTCT
TTGATTTGTGAGTCCAAAGGAGTTACTTCCAACTTAAAAGTACTTCAACA
TTCCTTAACCTATGTACAAAGTTTTAGGTCACATTAACTGTGAAGATATG
AGGTTGAGCTTCTTAATATGTTGTTTTGTGCACCTTATTAGACCTTATGT
TATGGATGGTTTATGCTGATTTTTTTTTATATTATTAATGAAAAATACAT
TTAATTTCGACACTTAGACCATCAGATGATCTAATGTACGTATTGGTAGG
GGGAAAACTGTATCAGTGAACTTGATTGAGTTTTTTTCACTTGTGAAACT
GGTAACTTGAGGTTTTATTAT
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