GH720586

EST Overview
NameGH720586
Unique NameGH720586
TypeEST
OrganismPisum sativum (pea)
Sequence length435
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Libraries
Library NameType
LIBEST_024272 BACIcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of GH720586 vs. TrEMBL
Match: C5YRN7_SORBI (Putative uncharacterized protein Sb08g002880 OS=Sorghum bicolor GN=Sb08g002880 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.534e-9
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 1
Query:   55 ETMCQLSALPAGCIPGLNLVTWNGKHCFVKLANLWVNLISSDPP 186
            E  C+L+ LP+  +PGLN+V WNG H FVKLANLW N IS DPP
Sbjct:  529 EMRCRLTLLPSSLLPGLNVVMWNGGHYFVKLANLWANRISPDPP 572          
BLAST of GH720586 vs. TrEMBL
Match: D7U1Z5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_128.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000040001 PE=4 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.004e-9
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 1
Query:   52 EETMCQLSALPAGCIPGLNLVTWNGKHCFVKLANLWVNLISSDPPK 189
            ++ +CQLS L    +PG+ +V WNG H F+ LANLW NLISSDPPK
Sbjct: 1022 QKPICQLSLLTPEMVPGMKMVAWNGNHYFLTLANLWANLISSDPPK 1067          
BLAST of GH720586 vs. TrEMBL
Match: A5BLA1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015338 PE=4 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.004e-9
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 1
Query:   52 EETMCQLSALPAGCIPGLNLVTWNGKHCFVKLANLWVNLISSDPPK 189
            ++ +CQLS L    +PG+ +V WNG H F+ LANLW NLISSDPPK
Sbjct: 1025 QKPICQLSLLTPEMVPGMKMVAWNGNHYFLTLANLWANLISSDPPK 1070          
BLAST of GH720586 vs. TrEMBL
Match: B9MZU6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_595592 PE=4 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.617e-9
Identity = 25/46 (54.35%), Postives = 35/46 (76.09%), Query Frame = 1
Query:   49 GEETMCQLSALPAGCIPGLNLVTWNGKHCFVKLANLWVNLISSDPP 186
            G+  +C+LS L AG +PG+ +V WNG+H F+ LANLW NL+S +PP
Sbjct:  952 GQGPICRLSVLAAGAVPGMKMVVWNGEHYFLPLANLWANLVSCNPP 997          
BLAST of GH720586 vs. TrEMBL
Match: B9I7W6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_570851 PE=4 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.617e-9
Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 1
Query:   49 GEETMCQLSALPAGCIPGLNLVTWNGKHCFVKLANLWVNLISSDPP 186
            G+  +CQLS L AG +PG+  V WNG+H F+ LANLW NL+S +PP
Sbjct:  974 GQGPICQLSVLTAGIVPGMKTVVWNGEHYFLTLANLWANLVSCNPP 1019          
BLAST of GH720586 vs. TrEMBL
Match: A6YTC8_CUCME (Nucleolar GTPase OS=Cucumis melo PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.614e-9
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 1
Query:   49 GEETMCQLSALPAGCIPGLNLVTWNGKHCFVKLANLWVNLISSDPP 186
            G++  C LS L A  IPG++LV WNG++ F+KLANLW NLI  DPP
Sbjct:  881 GQQPTCNLSLLSAESIPGMDLVVWNGENYFLKLANLWANLIGRDPP 926          
BLAST of GH720586 vs. TrEMBL
Match: Q2RAK3_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g05100 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.875e-7
Identity = 22/46 (47.83%), Postives = 33/46 (71.74%), Query Frame = 1
Query:   52 EETMCQLSALPAGCIPGLNLVTWNGKHCFVKLANLWVNLISSDPPK 189
            ++  C+L+ LP   +PG+ ++ W+  H FVK+ANLW N ISSDPP+
Sbjct:  577 DKMACKLTLLPTSLVPGMEVIIWDADHYFVKVANLWANQISSDPPQ 622          
BLAST of GH720586 vs. TrEMBL
Match: Q0IUM2_ORYSJ (Os11g0148400 protein OS=Oryza sativa subsp. japonica GN=Os11g0148400 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.875e-7
Identity = 22/46 (47.83%), Postives = 33/46 (71.74%), Query Frame = 1
Query:   52 EETMCQLSALPAGCIPGLNLVTWNGKHCFVKLANLWVNLISSDPPK 189
            ++  C+L+ LP   +PG+ ++ W+  H FVK+ANLW N ISSDPP+
Sbjct:  560 DKMACKLTLLPTSLVPGMEVIIWDADHYFVKVANLWANQISSDPPQ 605          
BLAST of GH720586 vs. TAIR peptide
Match: AT1G54920.3 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages. | chr1:20470916-20474898 FORWARD LENGTH=901)

HSP 1 Score: 53.9138 bits (128), Expect = 3.982e-8
Identity = 21/41 (51.22%), Postives = 27/41 (65.85%), Query Frame = 1
Query:   64 CQLSALPAGCIPGLNLVTWNGKHCFVKLANLWVNLISSDPP 186
            C +S L    +PG+  V WNG+H  + LAN+W NLIS DPP
Sbjct:  850 CYISGLNTDIVPGIKTVEWNGEHYLLPLANIWANLISRDPP 890          
BLAST of GH720586 vs. TAIR peptide
Match: AT1G54920.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:20470916-20474898 FORWARD LENGTH=890)

HSP 1 Score: 53.9138 bits (128), Expect = 3.982e-8
Identity = 21/41 (51.22%), Postives = 27/41 (65.85%), Query Frame = 1
Query:   64 CQLSALPAGCIPGLNLVTWNGKHCFVKLANLWVNLISSDPP 186
            C +S L    +PG+  V WNG+H  + LAN+W NLIS DPP
Sbjct:  839 CYISGLNTDIVPGIKTVEWNGEHYLLPLANIWANLISRDPP 879          
The following BLAST results are available for this feature:
BLAST of GH720586 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 8
Match NameE-valueIdentityDescription
C5YRN7_SORBI1.534e-963.64Putative uncharacterized protein Sb08g002880 OS=So... [more]
D7U1Z5_VITVI2.004e-958.70Whole genome shotgun sequence of line PN40024, sca... [more]
A5BLA1_VITVI2.004e-958.70Putative uncharacterized protein OS=Vitis vinifera... [more]
B9MZU6_POPTR2.617e-954.35Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9I7W6_POPTR2.617e-956.52Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A6YTC8_CUCME7.614e-958.70Nucleolar GTPase OS=Cucumis melo PE=4 SV=1[more]
Q2RAK3_ORYSJ1.875e-747.83Expressed protein OS=Oryza sativa subsp. japonica ... [more]
Q0IUM2_ORYSJ1.875e-747.83Os11g0148400 protein OS=Oryza sativa subsp. japoni... [more]
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BLAST of GH720586 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G54920.33.982e-851.22| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT1G54920.23.982e-851.22| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GH720586 ID=GH720586; Name=GH720586; organism=Pisum sativum; type=EST; length=435bp
CGATTAGCGTGGTCGCGGCCGAGGTACTTCAGACCTATGTCTTCTCANGG
AGAGGAAACTATGTGCCAATTGTCAGCCTTGCCTGCTGGTTGCATACCAG
GATTAAATTTGGTGACATGGAACGGGAAGCACTGCTTTGTTAAGCTCGCA
AACTTGTGGGTCAATCTGATAAGTTCAGATCCTCCCAAGTGATACTTGCC
AATTCAATCCGTCTCTTAAAACATGGAGATTCTCCCCCCTAGATTTTTCA
GTGTGTAGTTGAGGGTTTTTACACAGAAAAATCAATATGAGATTGTGGCA
GGATCCTTTTTTGGGGGACATTAGCAGCTGTCGTTAAAGATCAAGTAATA
TGGCTGCACTGCTCTTGTGTGTGATAAGACAAAGTCACCAATTAAGTTCA
TTCTTTTTTTCCGTAGGTACCTGCCCGGGCGGCCG
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