FG533620

EST Overview
NameFG533620
Unique NameFG533620
TypeEST
OrganismPisum sativum (pea)
Sequence length632
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v2Pisum sativum unigene v2EST
Pisum sativum unigene v1Pisum sativum unigene v1EST
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Pisum sativum unigene v22011-03-01
Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins2011-04-21
InterProScan analysis for Pisum sativum unigene v22011-04-27
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
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BLAST of FG533620 vs. Medicago proteins
Match: IMGA|Medtr4g108100.1 (Unknown Protein (AHRD V1) chr04_pseudomolecule_IMGAG_V3.5 37197812-37195027 E EGN_Mt100125 20100825)

HSP 1 Score: 56.6102 bits (135), Expect = 1.779e-16
Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = 1 
Query:    4 SKSAS-DIRNSRSVKKSEKPSKLETSKSGVKKRGKKADAKE 123
            SKSAS  +  SRSVKKS+K SKLET KSGVKK G+KADAKE
Sbjct:  324 SKSASGSLNRSRSVKKSDKSSKLETKKSGVKKYGRKADAKE 364

HSP 2 Score: 46.2098 bits (108), Expect = 1.779e-16
Identity = 23/28 (82.14%), Postives = 24/28 (85.71%), Query Frame = 2 
Query:  230 VSVSPTTSAGEKENMDVRSSDGDLIEVM 313
            VSVSP TS  EKENMDVRS+D DLIEVM
Sbjct:  365 VSVSPITSTEEKENMDVRSTDDDLIEVM 392
The following BLAST results are available for this feature:
BLAST of FG533620 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 1
Match NameE-valueIdentityDescription
IMGA|Medtr4g108100.11.779e-1675.61Unknown Protein (AHRD V1) chr04_pseudomolecule_IMG... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v2
Date Performed: 2011-04-27
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 8..41
score

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 8..41
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v2
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG533620 ID=FG533620; Name=FG533620; organism=Pisum sativum; type=EST; length=632bp
AATTCAAAATCTGCTTCTGATATCAGGAATAGTAGGTCAGTTAAAAAATC
CGAGAAGCCTAGTAAGCTTGAAACCAGTAAGAGTGGAGTCAAGAAACGTG
GAAAGAAAGCTGATGCTAAAGAAAGTAAGCTTGAAGGTGCGGCAGTTTTT
CTTTTATGACAGAATCAAGAGATTTTTTACAGTTAAGTTTGTCTAATACC
TTGTGTGGTTAACTTTTTGCTCTGATACAGTTTCTGTTAGTCCTACTACA
AGTGCTGGAGAAAAAGAAAACATGGATGTTCGGTCCTCGGATGGTGATTT
GATTGAAGTTATGTAAACAATGCTTTTGGGCTTGCAGTTCTGAATTTTAC
CATTCTCAAACTTTGTTTGGTCGTGTATAATGTTCTGTGTGGAGTTTGCT
TGATCTTTATGGGATTAAAGATGAAAAATTGATTACTTCTTCTACAAAAT
CTTAAAGAAACCAAGCTGTATTGGATGTAATGGATTGTCAATAATACTCT
ATAGTTGATTTTATTATCTTTGTGAAAAACTACAATTTGAGATGATTGGA
TTGTGAGTTTATCATCTCTTCTCATGTATTTATACGAATCTTGTGATATT
TTCTGATATTTTATATGAATGCATAATTTCAC
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