FG534794

EST Overview
NameFG534794
Unique NameFG534794
TypeEST
OrganismPisum sativum (pea)
Sequence length591
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG534794 vs. TrEMBL
Match: Q8L5G3_CICAR (Proline rich protein 3 (Fragment) OS=Cicer arietinum GN=prp3 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.470e-22
Identity = 49/51 (96.08%), Postives = 51/51 (100.00%), Query Frame = 1
Query:    1 RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNPFGKRKDGS 153
            RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGS+GMRIQYSKNPFGKRKDG+
Sbjct:  216 RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSVGMRIQYSKNPFGKRKDGN 266          
BLAST of FG534794 vs. TrEMBL
Match: Q9ASW4_ARATH (AT3G21215 protein OS=Arabidopsis thaliana GN=AT3G21215 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.842e-21
Identity = 48/50 (96.00%), Postives = 50/50 (100.00%), Query Frame = 1
Query:    1 RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNPFGKRKDG 150
            RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNP+GKRK+G
Sbjct:  269 RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNPYGKRKEG 318          
BLAST of FG534794 vs. TrEMBL
Match: D7L0Q3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479641 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.842e-21
Identity = 48/50 (96.00%), Postives = 50/50 (100.00%), Query Frame = 1
Query:    1 RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNPFGKRKDG 150
            RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNP+GKRK+G
Sbjct:  269 RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNPYGKRKEG 318          
BLAST of FG534794 vs. TrEMBL
Match: B9SG87_RICCO (RNA-binding protein with multiple splicing, putative OS=Ricinus communis GN=RCOM_1556280 PE=4 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.138e-20
Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 1
Query:    1 RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNPFGKRKDGS 153
            RHTVCFIEFEDVNSA+NVH +LQGAVIPSSGS+GMRIQYSKNPFGKRKDGS
Sbjct:  269 RHTVCFIEFEDVNSASNVHRSLQGAVIPSSGSVGMRIQYSKNPFGKRKDGS 319          
BLAST of FG534794 vs. TrEMBL
Match: B9HVD8_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_228501 PE=4 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.116e-17
Identity = 45/52 (86.54%), Postives = 47/52 (90.38%), Query Frame = 1
Query:    1 RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQY--SKNPFGKRKDG 150
            RHTVCFIEFED+NSATNVHH LQGAVIPSSGS+GMRIQY    NPFGKRKDG
Sbjct:  211 RHTVCFIEFEDLNSATNVHHTLQGAVIPSSGSVGMRIQYPFRFNPFGKRKDG 262          
BLAST of FG534794 vs. TrEMBL
Match: Q0J6Y0_ORYSJ (Os08g0249400 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os08g0249400 PE=4 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.125e-16
Identity = 40/49 (81.63%), Postives = 46/49 (93.88%), Query Frame = 1
Query:    1 RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNPFGKRKD 147
            R+TVCFIEFEDVN+A+ VHHNLQGAVIPSSG  GMRIQ+SKNP+G+RKD
Sbjct:   32 RNTVCFIEFEDVNAASAVHHNLQGAVIPSSGRGGMRIQFSKNPYGRRKD 80          
BLAST of FG534794 vs. TrEMBL
Match: C5YJK9_SORBI (Putative uncharacterized protein Sb07g008520 OS=Sorghum bicolor GN=Sb07g008520 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.364e-15
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 1
Query:    1 RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNPFGKRKDGS 153
            R+TVCFIEFEDVN+AT+VH  LQGAVIPSSG  GMRIQ+SKNPFG+RKD +
Sbjct:  257 RNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQFSKNPFGRRKDSA 307          
BLAST of FG534794 vs. TrEMBL
Match: C0P7A2_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.364e-15
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 1
Query:    1 RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNPFGKRKDGS 153
            R+TVCFIEFEDVN+AT+VH  LQGAVIPSSG  GMRIQ+SKNPFG+RKD +
Sbjct:  171 RNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQFSKNPFGRRKDSA 221          
BLAST of FG534794 vs. TrEMBL
Match: B6TSF8_MAIZE (Cell wall integrity protein scw1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.364e-15
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 1
Query:    1 RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNPFGKRKDGS 153
            R+TVCFIEFEDVN+AT+VH  LQGAVIPSSG  GMRIQ+SKNPFG+RKD +
Sbjct:  258 RNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQFSKNPFGRRKDSA 308          
BLAST of FG534794 vs. TrEMBL
Match: B6TDW6_MAIZE (Cell wall integrity protein scw1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.364e-15
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 1
Query:    1 RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNPFGKRKDGS 153
            R+TVCFIEFEDVN+AT+VH  LQGAVIPSSG  GMRIQ+SKNPFG+RKD +
Sbjct:  258 RNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQFSKNPFGRRKDSA 308          
BLAST of FG534794 vs. TAIR peptide
Match: AT3G21215.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:7442873-7445231 REVERSE LENGTH=339)

HSP 1 Score: 104.76 bits (260), Expect = 3.669e-23
Identity = 48/50 (96.00%), Postives = 50/50 (100.00%), Query Frame = 1
Query:    1 RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNPFGKRKDG 150
            RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNP+GKRK+G
Sbjct:  269 RHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNPYGKRKEG 318          
The following BLAST results are available for this feature:
BLAST of FG534794 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q8L5G3_CICAR7.470e-2296.08Proline rich protein 3 (Fragment) OS=Cicer arietin... [more]
Q9ASW4_ARATH4.842e-2196.00AT3G21215 protein OS=Arabidopsis thaliana GN=AT3G2... [more]
D7L0Q3_ARALY4.842e-2196.00Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9SG87_RICCO3.138e-2092.16RNA-binding protein with multiple splicing, putati... [more]
B9HVD8_POPTR1.116e-1786.54Predicted protein (Fragment) OS=Populus trichocarp... [more]
Q0J6Y0_ORYSJ6.125e-1681.63Os08g0249400 protein (Fragment) OS=Oryza sativa su... [more]
C5YJK9_SORBI1.364e-1578.43Putative uncharacterized protein Sb07g008520 OS=So... [more]
C0P7A2_MAIZE1.364e-1578.43Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
B6TSF8_MAIZE1.364e-1578.43Cell wall integrity protein scw1 OS=Zea mays PE=2 ... [more]
B6TDW6_MAIZE1.364e-1578.43Cell wall integrity protein scw1 OS=Zea mays PE=2 ... [more]
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BLAST of FG534794 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G21215.13.669e-2396.00| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330no descriptioncoord: 3..41
score: 0.0
NoneNo IPR availableSEGsegsegcoord: 52..66
score
NoneNo IPR availableSEGsegsegcoord: 10..25
score
NoneNo IPR availableSEGsegsegcoord: 1..17
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG534794 ID=FG534794; Name=FG534794; organism=Pisum sativum; type=EST; length=591bp
AGGCATACAGTCTGTTTCATTGAGTTTGAAGATGTGAATAGTGCTACAAA
TGTGCACCACAATCTACAGGGTGCTGTTATCCCAAGTTCTGGTTCAATTG
GCATGCGGATACAATATTCCAAAAATCCATTTGGGAAAAGAAAAGATGGG
AGTGTCCCTATTGCTGTTCCTCCTGGTGCCAACGGAGCCCCAGTAGCAAT
GGCTTATCAGTAGCTTGAAGGGGATGTACTCTGTTCTTTATGCTCCAACC
AATATTACTACATAATAGGATGCATCTTGCAGCTGTTACATGCATCCATT
GATTATCAAGTCATCGCCATTATCATCCCTGCTCATGTTAATGAATGCAG
TGGCATCATATACATTCATTTGCCTATGTTATACTAATCAGACATGCATT
TCTTGGCAGCATGTGTTGGTTCCCAAAATTACTTCCATAGGTGTTAGACG
ATGTTATCATTTGTAGAAGCTGTGCATGGGTCTTAATTTTGTTTTATTTG
TGTGCCTTATGGTCATTACACTTTCTGTATACATTGGTATTAGGAATGCT
TATCCAAGCAGGCATTGGCATCTGCTTCCACCTTTANGTTC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf