FG535475

EST Overview


Name	FG535475
Unique Name	FG535475
Type	EST
Organism	Pisum sativum (pea)
Sequence length	542

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Libraries


Library Name	Type
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTs	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of FG535475 vs. TrEMBL
Match: B9GVY9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_799586 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.401e-7
Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 3

Query:    3 YIKYSVEDLEDAVLDFFEGIPVSQHTRRRSQ 95
            YIKYSVEDLE+AVLDFFEG PVSQH RRRSQ
Sbjct:  599 YIKYSVEDLENAVLDFFEGYPVSQHLRRRSQ 629

[Close]

BLAST of FG535475 vs. TrEMBL
Match: B9N7F2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_785947 PE=4 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.829e-7
Identity = 28/31 (90.32%), Postives = 28/31 (90.32%), Query Frame = 3

Query:    3 YIKYSVEDLEDAVLDFFEGIPVSQHTRRRSQ 95
            YIKYSVEDLE AVLDFFEG PVSQH RRRSQ
Sbjct:  580 YIKYSVEDLESAVLDFFEGYPVSQHLRRRSQ 610

[Close]

BLAST of FG535475 vs. TrEMBL
Match: B9T3B0_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0392160 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 3.120e-7
Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 3

Query:    3 YIKYSVEDLEDAVLDFFEGIPVSQHTRRRSQ 95
            Y+KYSVEDLE+AVLDFFEG PVSQH RRRSQ
Sbjct:  586 YMKYSVEDLENAVLDFFEGYPVSQHLRRRSQ 616

The following BLAST results are available for this feature:

BLAST of FG535475 vs. TrEMBL

BLAST of FG535475 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 3


Match Name	E-value	Identity	Description
B9GVY9_POPTR	1.401e-7	90.32	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9N7F2_POPTR	1.829e-7	90.32	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9T3B0_RICCO	3.120e-7	87.10	Protein binding protein, putative OS=Ricinus commu...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 17..39 score
None	No IPR available	SEG	seg	seg	coord: 2..20 score: NAcoord: 56..63 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FG535475 ID=FG535475; Name=FG535475; organism=Pisum sativum; type=EST; length=542bp
ATTACATTAAGTATTCTGTCGAGGATCTGGAGGATGCTGTTTTGGATTTT
TTCGAAGGGATTCCTGTTTCGCAGCACACGAGAAGGAGATCTCAGATGAT
GGAGTGAAGGTTTTTTGCAACTTATTAGAAGCTAGGACAAAATATTCTTT
TAATTTTTTTCACCGGAGTGTTCAGGTCGTTTTAGTGCTGCTGCTGGTTA
ATCCGAGATTTCTATCGCAAGCTCTCTATCTCGAGTGCTTCCATGATTCG
CCGTCAAGGATTCTTCTCAGGAATAATGAAAAATATTTTAATCCTGTGAG
ATTGGTATGGCTTATGAAAAGCCGAAGAAGCCCTCAGCCTGAATGCTGCT
TCATGTAAGCATGTTATTTGATTTCATACCACATTCTAGATTTTGTTTCT
TCATTTTGTTTATATTGGTATTTATTGTTGTTTGTGTGGTTTTGTTAATT
ATTACTCTTAAGGTCACTCAGAAAGCTGTCTCTTTTGTAGCTTAAAAAGG
AATTCTAATCTATAAAATGTGATAGTTTTGGAACTTATAGAT

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