GH720603

EST Overview
NameGH720603
Unique NameGH720603
TypeEST
OrganismPisum sativum (pea)
Sequence length513
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v2Pisum sativum unigene v2EST
Pisum sativum unigene v1Pisum sativum unigene v1EST
Libraries
Library NameType
LIBEST_024272 BACIcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Pisum sativum unigene v22011-03-01
Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins2011-04-21
InterProScan analysis for Pisum sativum unigene v22011-04-27
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
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BLAST of GH720603 vs. Medicago proteins
Match: IMGA|Medtr2g036290.1 (Narbonin (AHRD V1 ***- Q08884_VICNA); contains Interpro domain(s) IPR001223 Glycoside hydrolase, family 18, catalytic domain chr02_pseudomolecule_IMGAG_V3.5 13124467-13125748 E EGN_Mt100125 20100825)

HSP 1 Score: 60.8474 bits (146), Expect = 4.092e-10
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:   13 LLPGVSTNTTSPLPMTTDIFVKGCTMLLKTASLPGVFVWDANTSS 147
            LLPGVST+  S   MT D+F+KGC  LL++ SLPG+FVW+AN S+
Sbjct:  242 LLPGVSTDPDSNTNMTRDVFIKGCKSLLESESLPGIFVWNANDSA 286
[Close]
BLAST of GH720603 vs. Medicago proteins
Match: IMGA|Medtr2g036260.1 (Narbonin (AHRD V1 ***- Q08884_VICNA); contains Interpro domain(s) IPR001223 Glycoside hydrolase, family 18, catalytic domain chr02_pseudomolecule_IMGAG_V3.5 13111939-13113270 E EGN_Mt100125 20100825)

HSP 1 Score: 60.8474 bits (146), Expect = 4.092e-10
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:   13 LLPGVSTNTTSPLPMTTDIFVKGCTMLLKTASLPGVFVWDANTSS 147
            LLPGVST+  S   MT D+F+KGC  LL++ SLPG+FVW+AN S+
Sbjct:  242 LLPGVSTDPDSNTNMTRDVFIKGCKSLLESESLPGIFVWNANDSA 286
[Close]
BLAST of GH720603 vs. Medicago proteins
Match: IMGA|Medtr2g036240.1 (Narbonin (AHRD V1 ***- Q08884_VICNA); contains Interpro domain(s) IPR001223 Glycoside hydrolase, family 18, catalytic domain chr02_pseudomolecule_IMGAG_V3.5 13099414-13100681 E EGN_Mt100125 20100825)

HSP 1 Score: 60.8474 bits (146), Expect = 4.092e-10
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:   13 LLPGVSTNTTSPLPMTTDIFVKGCTMLLKTASLPGVFVWDANTSS 147
            LLPGVST+  S   MT D+F+KGC  LL++ SLPG+FVW+AN S+
Sbjct:  242 LLPGVSTDPDSNTNMTRDVFIKGCKSLLESESLPGIFVWNANDSA 286
[Close]
BLAST of GH720603 vs. Medicago proteins
Match: IMGA|AC229724_1028.1 (Narbonin (AHRD V1 ***- Q08884_VICNA); contains Interpro domain(s) IPR001223 Glycoside hydrolase, family 18, catalytic domain AC229724.12 93039-91788 F EGN_Mt100125 20100825)

HSP 1 Score: 60.8474 bits (146), Expect = 4.092e-10
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:   13 LLPGVSTNTTSPLPMTTDIFVKGCTMLLKTASLPGVFVWDANTSS 147
            LLPGVST+  S   MT D+F+KGC  LL++ SLPG+FVW+AN S+
Sbjct:  242 LLPGVSTDPDSNTNMTRDVFIKGCKSLLESESLPGIFVWNANDSA 286
The following BLAST results are available for this feature:
BLAST of GH720603 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 4
Match NameE-valueIdentityDescription
IMGA|Medtr2g036290.14.092e-1060.00Narbonin (AHRD V1 ***- Q08884_VICNA); contains Int... [more]
IMGA|Medtr2g036260.14.092e-1060.00Narbonin (AHRD V1 ***- Q08884_VICNA); contains Int... [more]
IMGA|Medtr2g036240.14.092e-1060.00Narbonin (AHRD V1 ***- Q08884_VICNA); contains Int... [more]
IMGA|AC229724_1028.14.092e-1060.00Narbonin (AHRD V1 ***- Q08884_VICNA); contains Int... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v2
Date Performed: 2011-04-27
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 44..49
score

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 44..49
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v2
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GH720603 ID=GH720603; Name=GH720603; organism=Pisum sativum; type=EST; length=513bp
CCGGGCAGGTAACTCTTGCCAGGAGTCAGCACCAATACAACTAGTCCTCT
TCCAATGACAACTGATATCTTTGTTAAGGGATGCACAATGCTCCTTAAAA
CTGCATCACTTCCGGGAGTTTTTGTGTGGGATGCTAATACCTCTTCTCCC
GCATATTCACTTGAGGGAGAGCTTCAAGACCTCCTCACTAAACAGTGATT
GCTTACTGGTAATTTTGCAGGTCATACATACTATAAATAATAGCAAGGCC
TTATGAGTCATGCTATGTATAGTATGTCACATATCCTAAATAAGACCTAT
CATTCACCAGGGTGCTCTTTTTACTGCTTATATGTTTGTTTCTTACACTT
TTCTCCCTGTTTTCTTTAAGTGTTATGTTATGTTGTAAGATATGAATTGC
TTCTTTTGTATGTATCCTGAACTATCTGTAATATCTTGGTATCAAGTTAA
TAATAAGAAGCAAATATTATTGTTTTCTATTTCTCTAAAAAAAAACCTCG
GCCGCGACCACGC
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