FG530949

EST Overview
NameFG530949
Unique NameFG530949
TypeEST
OrganismPisum sativum (pea)
Sequence length593
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v2Pisum sativum unigene v2EST
Pisum sativum unigene v1Pisum sativum unigene v1EST
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Pisum sativum unigene v22011-03-01
Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins2011-04-21
Homology
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BLAST of FG530949 vs. Medicago proteins
Match: IMGA|Medtr8g102650.1 (Pentatricopeptide repeat-containing protein At1g10270 (AHRD V1 *-*- Q9SY69); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat chr08_pseudomolecule_IMGAG_V3.5 29962902-29969647 E EGN_Mt100125 20100825)

HSP 1 Score: 57.3806 bits (137), Expect = 5.841e-9
Identity = 31/57 (54.39%), Postives = 34/57 (59.65%), Query Frame = 3 
Query:   84 GYHHPLSEPTPPTPGIYLRSYGSSAKLSMPYTALGTSSKTTGHYHPSSGTSLHFEES 254
            G HHP+S P PP     L S+GSS          GTSS+ TG YHPSSGT  HFEES
Sbjct:  857 GQHHPMSGPYPPMSEPSLPSHGSSGP--------GTSSQITGPYHPSSGTPPHFEES 905
The following BLAST results are available for this feature:
BLAST of FG530949 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 1
Match NameE-valueIdentityDescription
IMGA|Medtr8g102650.15.841e-954.39Pentatricopeptide repeat-containing protein At1g10... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v2
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG530949 ID=FG530949; Name=FG530949; organism=Pisum sativum; type=EST; length=593bp
AATACAATGATTGGCGCTAGAACAGCTCGAAAAACTTCAAGACGCGATGA
GTCAGACATAGAAAGTGATTGAAACAATGGTTAGGGTATCACCATCCACT
GTCTGAACCAACTCCTCCAACGCCTGGGATATATCTTCGGTCATACGGAT
CGTCAGCTAAATTATCCATGCCATATACAGCCCTCGGAACATCTTCTAAG
ACTACGGGACACTATCACCCATCATCAGGGACCTCTCTTCACTTTGAAGA
ATCACTTCAACAATTTCAAGTCCCCGAACAGGTTGTAGTCTGATTGACGT
TCAAGCTAACTCTAACTGTTTCTGATTTTCTTTGAATTTCAGTATCTTAG
ATGCTTACTTCTGATGTGCAGAATCACTAGGTATTTCTGAGGAGTCTGTA
CTGGAATATTTTTTTATTTATTCATCAGGGACTTTAGAGTTATTTTAATT
TATTCATGTAATTCTACCTGTAATATTTAATAGTTAATACAGTACAACAT
GTTATTGAACCTCATAAACTGTTTAAACTTTAGAGTTTAGAGTTTAATTT
GGCATTGAAATGTAACTGATACTGAGATTTTGCCGAAAAAAAA
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