CaM0038, CaM0038 (genetic_marker) Cicer arietinum | PulseDB

Marker Overview

Marker Overview


Name	CaM0038
Genbank ID	EI847480
Type	SSR
Species	Cicer arietinum
Germplasm	ICC4958
Repeat Motif	(TAA)43
Primer 1	CaM0038.Forward primer: CATGCTCGAATCTTATTTTGAGG
Primer 2	CaM0038.Reverse primer: TCGATATAGCAAGGGAGAGGA
Product Length	272
Publication	[view all]

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	chickpea-C214xILC3279-F2	LG5B	N/A	0	CaM0038	View
2	chickpea-ICC4958xPI489777-RIL-F10	LG5	N/A	99.97	CaM0038	View
3	chickpea-ICC4958xPI489777-RIL-F10-2012	LG05	N/A	89.42	CaM0038	View
4	chickpea-ICCV2xJG11-RIL	LG05	N/A	0	CaM0038	View
5	chickpea-ICCV96029×CDCFrontier-F2-2017	CaLG05	N/A	3.4	CaM0038	View
6	chickpea-ICC5810×CDCFrontier-F2-2017	CaLG05	N/A	4.4	CaM0038	View
7	chickpea-ICC16641×CDCFrontier-F2-2017	CaLG05	N/A	6.6	CaM0038	View
8	chickpea-flowering_time_consensus_map-F2-2017	CaLG05	N/A	4.2	CaM0038	View
9	Chickpea-ICC4958× ICC1882-RIL	CaLG05	N/A	14.4	CaM0038	View
10	Chickpea-JG62/ICCV05530-RIL	LG05	N/A	21.46	CaM0038	View

References

External references for this genetic_marker


Database	Accession
DB:genbank	EI847480

Germplasm


Stock Name	Type
ICC4958	accession

Publications


Year	Publication
2011	Thudi M, Bohra A, Nayak SN, Varghese N, Shah TM, Penmetsa RV, Thirunavukkarasu N, Gudipati S, Gaur PM, Kulwal PL, Upadhyaya HD, Kavikishor PB, Winter P, Kahl G, Town CD, Kilian A, Cook DR, Varshney RK. Novel SSR markers from BAC-end sequences, DArT arrays and a comprehensive genetic map with 1,291 marker loci for chickpea (Cicer arietinum L.). PloS one. 2011; 6(11):e27275.